Clupea harengus (Atlantic herring): 105896008
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Entry
105896008 CDS
T09045
Name
(RefSeq) alpha-amylase-like
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00500
Starch and sucrose metabolism
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
105896008
Enzymes [BR:
char01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
105896008
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
Alpha-amylase
Motif
Other DBs
NCBI-GeneID:
105896008
NCBI-ProteinID:
XP_012678181
Ensembl:
ENSCHAG00000004062
UniProt:
A0A6P3VQ27
LinkDB
All DBs
Position
14:20746310..20754619
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AA seq
515 aa
AA seq
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MKMKLLIFVALLGLSLAQHSPHTKHGRTSIVHLFEWRWADIAAECERYLAPNGYGGVQIS
PPNEHIVVSSPWRPWWERYQPIGYNLCSRSGNEQELQDMITRCNNVGVNIYVDAVINHMC
GSGGGEGHHSSCGSYFNAHKKDFPTVPYSAMDFNDGKCKTGSGNIESYNDINQVRDCRLV
SLLDLALEKEHVRAKTADYMNKLIDMGVAGFRVDACKHMWPGDMKAVFDRMHNLNTHWFA
GGSRPFIFQEVIDLGGEPIQSREYFGLGRVTEFKYGARLGNIVRKWNGEKLSYLKNWGEG
WGFMPNDKAVVFVDNHDNQRGHGAGGAAIVTFWDSRLYKMAMALMLAHPYGVTRVMSSFR
WDRRIVNGKDQNDWMGPPSFSNGSTKPVPINPDTTCGDGWVCEHRWRQIRNMVIFRNVVN
GQPFSNWWDNQSNQIAFGRGNQGFLVINNDDWNLDVTLNTGLPAGTYCDVISGDKNENRC
TGKQVQVGGDGRAHFQISNMAEDPFMAIHAESKLC
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaagctcctgattttcgttgctcttttgggcctaagcttagcccagcacagc
cctcacaccaaacatggaagaacctccatcgtccatttgtttgagtggcgctgggcagat
atagctgccgaatgcgaacgttacctggcaccgaacggctatgggggtgttcagatctcc
cctccgaacgaacacattgttgtgtccagcccctggagaccctggtgggagagatatcag
ccaatcggctacaacctgtgctcccgatcaggaaatgaacaggagctccaggatatgatc
accagatgcaacaatgttggggtcaacatctacgttgatgccgtcatcaaccacatgtgt
ggatcaggagggggagagggccaccactcaagctgtggctcctacttcaacgcacacaag
aaagacttccccaccgtgccttattcagccatggacttcaacgacggcaaatgcaaaact
ggcagcggaaacatcgagagctacaatgacattaaccaagtaagggactgtcgtctcgtg
agtctgctagatctggctctggagaaggagcacgtgcgggccaagacggccgactacatg
aacaagctgatcgacatgggcgtggccgggttcagggtggatgcctgtaagcacatgtgg
cctggagacatgaaggctgtctttgacagaatgcacaacctcaacacccattggtttgct
ggtggctccaggccattcatcttccaagaggttatcgatcttggtggagagcccatccag
tcccgtgaatactttggattgggcagggtgaccgagtttaagtatggagccagactaggc
aatatagtgcgcaaatggaacggcgagaagctcagctacctgaaaaactggggtgagggc
tggggcttcatgcccaatgataaagcggtggtgtttgtggataaccatgacaaccaaagg
ggccacggagcgggcggagccgctattgtcacattttgggactccaggctgtataagatg
gccatggctctcatgttggcccatccttacggagtcaccagggtgatgtcaagcttccgc
tgggatcgccgcatcgtcaacggaaaggaccagaatgactggatggggcctccaagcttc
tctaacgggtccaccaagccagtacccatcaacccagacaccacctgtggggatggctgg
gtctgtgaacacaggtggcgacagattagaaacatggtgattttccgtaatgtggtcaat
gggcaacctttctccaactggtgggacaaccagagcaaccagattgcttttggacgtggc
aaccaaggattccttgtcatcaacaatgatgattggaacctggatgtgaccctgaacacc
ggcctacctgcgggcacctactgtgatgtcatttccggggacaagaacgaaaacaggtgc
acagggaaacaggtccaggtgggaggggacggacgggcccatttccaaatcagcaacatg
gcggaggatccgttcatggccatccatgcagagtcaaaactgtgttga
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