KEGG   Clupea harengus (Atlantic herring): 105896028
Entry
105896028         CDS       T09045                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
  KO
K06245  laminin, beta 4
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04510  Focal adhesion
char04512  ECM-receptor interaction
char04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    105896028 (lamb4)
   04518 Integrin signaling
    105896028 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    105896028 (lamb4)
SSDB
Motif
Pfam: EGF_laminin Laminin_N LAMB1 EGF_LMN_ATRN LAMININ_IV_B LAMB4 F5_F8_type_C HWE_HK
Other DBs
NCBI-GeneID: 105896028
NCBI-ProteinID: XP_031417593
Ensembl: ENSCHAG00000014816
UniProt: A0A6P8EN44
LinkDB
Position
3:1272594..1294734
AA seq 1845 aa
MMALGPSLFLLTYFAAPLLCQDECDDNSCHPQLGDLMVGRSPQLSASSTCGLEGPQNYCI
LGYLEDEQKCFLCDSRTSYNSYHNPSSHRIENVITAFEGSERKMKWWQSENGVHRVSIKL
DLETVFQFSHLVLTFKSFRPAAMLVERSKDFGQTWKVFRYFAENCQASFPGVSEEPADSL
DDVICDSRYSGLEPSTDGEVVLKALDPRFQIDDPYDPKIQELITITNLRVNFTRLLTLGD
TLLSRRRRSPQDKYYYALYEMVVRGSCFCNGHASQCMPVDNARGDAFSEPGMVHGRCVCQ
HHTVGYNCERCEDFYNDAPWRPSGTSNPQVCRKCNCHGHSERCHFDMGRFVASGEVSGGV
CEDCRSNRVGAQCEQCQTFFYQDPSRSMEDPEACVACDCDPAGSLDNGLCDAVTGRCVCK
ENVEGERCDRCKYAFYGLRQDDPSGCQFCQCNLLGSITAPHSCDQVTGQCFCQHFATGAY
CDQCVSGYWGLGNTVYSCLPCDCDIGGSTSSLCSSVDGQCPCRPNMVGLSCSNPAPGHYL
APLDYYIYEAEDAEPLDSTESEDAAPPDSSDPEDAAPPDSSGPEDAAPLDSSSSEDAAPP
DSSSLVNPLTPTGPALPKCEQYYREQGYDFILSDGQYVLTKREKRSTRQRRQDQYVAPEP
GQATQQVLPRERRPGFPVTWTGPGFMRAQHGAVLRFTVPNIPAASLQYHLLLHYEPQSSD
DWSATIRVVSSGPLDYGRCPNVPSTDMYLTLSATNRVARLDSTVCLEAGVEYSVDVTLRR
LSSPDSQSSRYILIDSLGLVPQVHSRANPNPDPNPNPRCLEATELQQYRCVELLQAGTPP
EQCKGLVSSVSALVHNGAIPCDCNSEGAYRETCAKFGGQCECKPNVIGRCCDSCAPLTYG
FGPNGCTACECDSSGSTAELCDGTTGQCPCRAEVTGRHCDQCLPGHYGFPQCSPCQCNGL
ADLCDPVSGACQDCRGHSTGHTCDRCIPGYYGDPVFREPCEPCTCPDVEDSGRFFALSCS
KDDDTGSLACDCLRGHEGARCDSCAPGFYGDLALPGAQCEECRCNNNTDPRDADACDTVT
GDCLRCLHNTQGSSCERCRPGYYGDALVQDCKECSCDRRGTEVTRCPLDSPCFCDEETGQ
CPCRGGVIGPLCNECDDGYWNLDGDSGCQPCKCERDHSLNNTCDKITGQCPCLPEYGGQQ
CYECAENYFGDPDVQCLYCDCNMEGTLRPACAMDTGECRCRPGVMGILCDECAPGHESVF
PECQPCHPCSLLWAENVTDVKRAAEKMRTLVPKPGDDKQPAHGQRWQRVLDMQSQLEAAL
NMTGDAQADLDAAEDLYSRVLKLKDSIDPSVIIIDPTSLLNTEIDNIKLEFQKVIDKLIE
KTKEVPITDPQALNDTLEEVRQHYKDFIKDEERVKDADAKLDSSRELRQKSKLELSKCHT
GDWDTLEKKIKALTVTKLNENVCGAPGDADCSEARCGGALCQTDAQKRKCGGPGCRGSVP
VSHNASETAEKTENDILDLLHKLRDSAIKINEAKDMNEEIKDEAVKMKQKITDSKSQFEK
EKNGTKDLLKKVKDYLTDEMVKPEDIEKMAKAVLAIQLPSTPDEIQTMIQNIRDVLANFT
DFKEDLELLKDKAKTAEELREQAEDVKNRTKNIDVSDIRKTLQEADQLHDKVSDGLDVAK
ANTDEAADKVKKTDRKLDNIEALLSPNVKGVLDDIEALKKKTEMNRVQAEDALAAAEAAL
KDATDVDTDVKEVIDLFETLKDTAANQTVNDEVSERVKNITAEVESLAKDVADKMKKIED
LEKRFQKNLQSKEDKENDVARLLEEAADLRREIGQRADAYLKCTS
NT seq 5538 nt   +upstreamnt  +downstreamnt
atgatggccctgggcccctccctgttcctgctcacgtatttcgccgcccctctcctctgt
caagatgagtgtgatgacaactcgtgtcacccacagctgggagacctgatggtaggccgt
tctccgcagctctcagcttcctccacctgtggactcgaaggacctcagaactactgcatc
ttgggatacttggaggatgagcagaagtgcttcctctgtgactccaggacctcttacaac
agctatcacaatcccagtagccatcgcattgagaatgtgatcacagcctttgaagggtca
gagcgcaagatgaagtggtggcagtctgaaaatggtgttcaccgtgttagcataaaactg
gacctggagactgtgttccagtttagccacctcgttctaacttttaagagcttccgacct
gcggccatgctagtggagaggtccaaggattttggacagacctggaaggttttccgttac
tttgctgagaactgtcaagcctccttccctggggtgtcagaggagccagcggacagttta
gatgatgtcatctgtgacagccgctactcaggcctggagccctccacagatggagaggtt
gtgcttaaagccttggaccccaggtttcaaatagatgacccatatgatcctaaaatacaa
gagctcatcaccataacgaacttgagggtgaacttcacacgtcttctgacgttgggcgac
acgctgctgagtcggcggcggaggagtccacaggacaaatactactacgccctctatgag
atggtggtcaggggcagctgcttctgcaatggccacgccagccagtgcatgcctgtggac
aacgcccggggggatgccttcagcgagccaggcatggtacatggacgatgtgtctgtcag
caccacacggttggctacaactgtgagagatgtgaagacttctacaacgacgccccctgg
aggccatctggaacttcaaacccacaagtctgcagaaaatgcaactgtcacggccactcg
gagaggtgtcactttgatatgggccggtttgtggccagcggggaggtcagtggaggtgtc
tgtgaagactgccggagcaaccgcgtgggcgcccagtgtgaacagtgccagaccttcttc
tatcaggatcccagcaggtccatggaggacccagaggcgtgcgtcgcatgtgactgtgac
cctgctggctctctggacaatgggctctgtgatgccgtcacggggcggtgcgtgtgcaag
gagaatgtggagggggagagatgtgaccgctgtaaatacgccttctacggtttacgccaa
gatgaccccagcggctgccagttttgccagtgtaacctgcttggtagcatcaccgcaccc
cattcatgtgaccaggtcacgggacagtgtttctgtcagcattttgccaccggagcctac
tgtgaccagtgtgtgtcaggctattggggtctgggaaacaccgtgtacagctgcctgccc
tgtgactgtgacataggtggatccaccagcagtttgtgctccagtgttgatggtcagtgt
ccttgccgacccaacatggtgggcctcagctgtagtaatccggctcctggtcactatctg
gccccgctggactactacatttatgaagctgaggacgcagaacccctcgacagcactgaa
tctgaggacgcagcacccccggacagcagtgaccctgaggacgcagcaccgccggacagc
agtggccctgaggacgcagcacccctcgacagcagtagctctgaggacgcagcacccccg
gacagctcatctttggttaatccactcactcccacgggtccagcactgcccaaatgtgag
caatattaccgtgagcaaggctacgacttcatcctcagtgatggacagtatgtcctgact
aaacgagagaagaggagcacacggcaacgaaggcaggaccagtatgtagccccagagcct
ggtcaagccacgcagcaggtcctccccagagagcgccggcccggtttccccgtcacctgg
accggccctgggttcatgcgggcgcaacatggagccgtcctcaggttcaccgttcccaac
atcccagcagcctccctccagtaccacctgcttctgcactatgaaccgcagtcctcagat
gactggagtgccactatcagagttgtgtcctcgggacctctagactatgggaggtgtcca
aacgtcccatccacagatatgtacctgacactgtcagctaccaacagggtggctcgtttg
gactccacggtctgtttggaagctggagtggaatactctgtggatgtcactctaagaagg
ttgtccagtccagactcacagtccagcagatacatcctcattgactcgttgggcctggtc
ccccaggtgcactctagagctaaccctaaccctgaccctaaccctaacccccggtgcctg
gaggccactgagctgcagcagtaccgctgtgtggagctgctgcaggctggaactcctcca
gagcagtgcaaaggcctcgtcagcagcgtgtctgccctcgtccacaatggggccattccc
tgcgactgtaattctgagggggcttacagagaaacctgcgctaagtttgggggtcagtgt
gagtgtaagccaaatgtgattggccgctgctgtgactcctgtgccccactgacctatggc
tttggaccgaatggatgcacagcctgtgagtgtgactccagtggctcaaccgcggagctc
tgtgacgggacaactggccagtgtccgtgtcgtgcagaggtcactggccggcactgtgac
cagtgtctgcccggccattatggctttcctcaatgctccccctgccagtgcaatggactc
gctgacctctgtgaccccgtgagtggagcatgtcaggactgccggggccactccactgga
cacacctgtgacaggtgtattcctggttactatggagacccagtcttcagagaaccctgc
gagccgtgcacgtgcccagatgtggaggacagtggccgtttcttcgccctgtcctgcagc
aaggacgacgacaccggcagcctcgcctgcgactgcctcaggggccacgaaggagctcgc
tgtgacagctgcgcgcctggtttctatggagacctggcgttgcctggcgcccaatgcgag
gagtgtcgctgcaacaacaacactgacccccgggacgctgatgcctgtgacacagtgact
ggcgactgtctgcgctgcctgcacaacacccagggatcctcctgcgagcgctgtagacca
gggtactatggcgatgctctggtgcaagactgtaaagagtgctcctgtgaccggcgtggc
actgaggtgacccgatgcccgctggacagcccgtgtttctgtgacgaggagactgggcag
tgcccctgccgcggaggtgtgataggccctctctgtaatgagtgtgatgatggctactgg
aacctggatggtgattcagggtgccagccttgcaaatgtgaacgtgatcactcgctcaac
aacacctgtgacaagatcacaggccagtgcccctgcctgccagagtatgggggacaacag
tgttacgagtgtgcagagaattactttggagacccagacgtacagtgcctttactgtgac
tgtaatatggagggcaccctgcggcctgcctgtgccatggacacgggcgagtgtcgctgc
cgccccggagtgatgggcatcctctgtgacgagtgcgcccccggccacgagtccgtgttc
cccgagtgccaaccgtgccacccctgctccttgctctgggctgaaaatgtcacggacgtc
aagagggcggcggagaagatgcgaaccctcgtgcctaagcctggtgacgataagcagccc
gctcacggtcagcgctggcagcgcgtcctggacatgcagtctcagctggaggcagctctg
aacatgacaggagacgcccaggctgacctggatgctgcagaggatctgtactcccgtgtt
ctgaagttgaaagacagcatagatcccagtgtcattatcattgacccaacatcacttctg
aacacggaaatagataacatcaagctggagttccagaaagtcatagacaagttaatagag
aaaacaaaggaagtcccaataacagacccccaggctctgaatgacacactggaggaagtg
agacagcattataaagacttcatcaaagatgaggagcgggtcaaggacgcggacgctaaa
ctagactcgtcccgggagctcaggcagaagagcaagctggagctgagcaagtgtcacacg
ggagactgggacaccttggagaagaaaatcaaagctttaaccgtgaccaagctcaacgaa
aatgtgtgtggagctccaggcgacgcggactgctccgaggcccggtgcgggggtgcgttg
tgtcagactgacgctcagaagcgcaagtgtggaggccccggctgccggggcagtgttcct
gtgagccacaacgcctcggagacagcggagaagaccgagaatgacatccttgatctgctc
cacaaactcagagattcagcgattaagattaacgaggccaaagatatgaatgaagagatt
aaagacgaagccgtgaagatgaaacagaagatcacagacagtaagagccaatttgagaag
gagaaaaatggcaccaaggatctccttaagaaggttaaggactacctcactgatgagatg
gtgaagccagaggacattgagaaaatggccaaagcagtcttagctattcagttgcccagc
actccagatgaaatccagaccatgatccagaacatccgggacgtgctggccaacttcacg
gactttaaggaagacctcgagctcctgaaggataaagccaagactgcagaggaactgcgt
gaacaagccgaggatgtcaaaaaccgaaccaagaatattgatgtgagtgacattcggaag
accttacaggaggctgaccagttacatgataaggtctcggatggcctggacgttgccaag
gccaacacagacgaagctgccgacaaagtgaaaaagactgacagaaaactggacaacata
gaggctctgttgagtccaaatgtaaaaggcgtgctggacgacatcgaagctttgaagaag
aaaactgaaatgaacagagtgcaggcggaggacgctctagcagcagccgaggcagcttta
aaggatgccacagacgtcgacacggatgttaaagaagtaattgacctgtttgaaacacta
aaagacacggccgccaatcagacggttaatgatgaggtgagcgagcgtgtgaaaaacatc
acagctgaagtggaaagcttggccaaagatgtggctgacaagatgaagaaaatcgaagac
ttggaaaaaagattccagaaaaacctccaaagtaaagaggataaagagaacgatgttgct
cggctgttggaagaggccgctgacctcaggagggagatcggccagagggcggacgcctac
ctaaagtgcacctcctga

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