Clupea harengus (Atlantic herring): 105896028
Help
Entry
105896028 CDS
T09045
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04510
Focal adhesion
char04512
ECM-receptor interaction
char04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105896028 (lamb4)
04518 Integrin signaling
105896028 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105896028 (lamb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMB1
EGF_LMN_ATRN
LAMININ_IV_B
LAMB4
F5_F8_type_C
HWE_HK
Motif
Other DBs
NCBI-GeneID:
105896028
NCBI-ProteinID:
XP_031417593
Ensembl:
ENSCHAG00000014816
UniProt:
A0A6P8EN44
LinkDB
All DBs
Position
3:1272594..1294734
Genome browser
AA seq
1845 aa
AA seq
DB search
MMALGPSLFLLTYFAAPLLCQDECDDNSCHPQLGDLMVGRSPQLSASSTCGLEGPQNYCI
LGYLEDEQKCFLCDSRTSYNSYHNPSSHRIENVITAFEGSERKMKWWQSENGVHRVSIKL
DLETVFQFSHLVLTFKSFRPAAMLVERSKDFGQTWKVFRYFAENCQASFPGVSEEPADSL
DDVICDSRYSGLEPSTDGEVVLKALDPRFQIDDPYDPKIQELITITNLRVNFTRLLTLGD
TLLSRRRRSPQDKYYYALYEMVVRGSCFCNGHASQCMPVDNARGDAFSEPGMVHGRCVCQ
HHTVGYNCERCEDFYNDAPWRPSGTSNPQVCRKCNCHGHSERCHFDMGRFVASGEVSGGV
CEDCRSNRVGAQCEQCQTFFYQDPSRSMEDPEACVACDCDPAGSLDNGLCDAVTGRCVCK
ENVEGERCDRCKYAFYGLRQDDPSGCQFCQCNLLGSITAPHSCDQVTGQCFCQHFATGAY
CDQCVSGYWGLGNTVYSCLPCDCDIGGSTSSLCSSVDGQCPCRPNMVGLSCSNPAPGHYL
APLDYYIYEAEDAEPLDSTESEDAAPPDSSDPEDAAPPDSSGPEDAAPLDSSSSEDAAPP
DSSSLVNPLTPTGPALPKCEQYYREQGYDFILSDGQYVLTKREKRSTRQRRQDQYVAPEP
GQATQQVLPRERRPGFPVTWTGPGFMRAQHGAVLRFTVPNIPAASLQYHLLLHYEPQSSD
DWSATIRVVSSGPLDYGRCPNVPSTDMYLTLSATNRVARLDSTVCLEAGVEYSVDVTLRR
LSSPDSQSSRYILIDSLGLVPQVHSRANPNPDPNPNPRCLEATELQQYRCVELLQAGTPP
EQCKGLVSSVSALVHNGAIPCDCNSEGAYRETCAKFGGQCECKPNVIGRCCDSCAPLTYG
FGPNGCTACECDSSGSTAELCDGTTGQCPCRAEVTGRHCDQCLPGHYGFPQCSPCQCNGL
ADLCDPVSGACQDCRGHSTGHTCDRCIPGYYGDPVFREPCEPCTCPDVEDSGRFFALSCS
KDDDTGSLACDCLRGHEGARCDSCAPGFYGDLALPGAQCEECRCNNNTDPRDADACDTVT
GDCLRCLHNTQGSSCERCRPGYYGDALVQDCKECSCDRRGTEVTRCPLDSPCFCDEETGQ
CPCRGGVIGPLCNECDDGYWNLDGDSGCQPCKCERDHSLNNTCDKITGQCPCLPEYGGQQ
CYECAENYFGDPDVQCLYCDCNMEGTLRPACAMDTGECRCRPGVMGILCDECAPGHESVF
PECQPCHPCSLLWAENVTDVKRAAEKMRTLVPKPGDDKQPAHGQRWQRVLDMQSQLEAAL
NMTGDAQADLDAAEDLYSRVLKLKDSIDPSVIIIDPTSLLNTEIDNIKLEFQKVIDKLIE
KTKEVPITDPQALNDTLEEVRQHYKDFIKDEERVKDADAKLDSSRELRQKSKLELSKCHT
GDWDTLEKKIKALTVTKLNENVCGAPGDADCSEARCGGALCQTDAQKRKCGGPGCRGSVP
VSHNASETAEKTENDILDLLHKLRDSAIKINEAKDMNEEIKDEAVKMKQKITDSKSQFEK
EKNGTKDLLKKVKDYLTDEMVKPEDIEKMAKAVLAIQLPSTPDEIQTMIQNIRDVLANFT
DFKEDLELLKDKAKTAEELREQAEDVKNRTKNIDVSDIRKTLQEADQLHDKVSDGLDVAK
ANTDEAADKVKKTDRKLDNIEALLSPNVKGVLDDIEALKKKTEMNRVQAEDALAAAEAAL
KDATDVDTDVKEVIDLFETLKDTAANQTVNDEVSERVKNITAEVESLAKDVADKMKKIED
LEKRFQKNLQSKEDKENDVARLLEEAADLRREIGQRADAYLKCTS
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgatggccctgggcccctccctgttcctgctcacgtatttcgccgcccctctcctctgt
caagatgagtgtgatgacaactcgtgtcacccacagctgggagacctgatggtaggccgt
tctccgcagctctcagcttcctccacctgtggactcgaaggacctcagaactactgcatc
ttgggatacttggaggatgagcagaagtgcttcctctgtgactccaggacctcttacaac
agctatcacaatcccagtagccatcgcattgagaatgtgatcacagcctttgaagggtca
gagcgcaagatgaagtggtggcagtctgaaaatggtgttcaccgtgttagcataaaactg
gacctggagactgtgttccagtttagccacctcgttctaacttttaagagcttccgacct
gcggccatgctagtggagaggtccaaggattttggacagacctggaaggttttccgttac
tttgctgagaactgtcaagcctccttccctggggtgtcagaggagccagcggacagttta
gatgatgtcatctgtgacagccgctactcaggcctggagccctccacagatggagaggtt
gtgcttaaagccttggaccccaggtttcaaatagatgacccatatgatcctaaaatacaa
gagctcatcaccataacgaacttgagggtgaacttcacacgtcttctgacgttgggcgac
acgctgctgagtcggcggcggaggagtccacaggacaaatactactacgccctctatgag
atggtggtcaggggcagctgcttctgcaatggccacgccagccagtgcatgcctgtggac
aacgcccggggggatgccttcagcgagccaggcatggtacatggacgatgtgtctgtcag
caccacacggttggctacaactgtgagagatgtgaagacttctacaacgacgccccctgg
aggccatctggaacttcaaacccacaagtctgcagaaaatgcaactgtcacggccactcg
gagaggtgtcactttgatatgggccggtttgtggccagcggggaggtcagtggaggtgtc
tgtgaagactgccggagcaaccgcgtgggcgcccagtgtgaacagtgccagaccttcttc
tatcaggatcccagcaggtccatggaggacccagaggcgtgcgtcgcatgtgactgtgac
cctgctggctctctggacaatgggctctgtgatgccgtcacggggcggtgcgtgtgcaag
gagaatgtggagggggagagatgtgaccgctgtaaatacgccttctacggtttacgccaa
gatgaccccagcggctgccagttttgccagtgtaacctgcttggtagcatcaccgcaccc
cattcatgtgaccaggtcacgggacagtgtttctgtcagcattttgccaccggagcctac
tgtgaccagtgtgtgtcaggctattggggtctgggaaacaccgtgtacagctgcctgccc
tgtgactgtgacataggtggatccaccagcagtttgtgctccagtgttgatggtcagtgt
ccttgccgacccaacatggtgggcctcagctgtagtaatccggctcctggtcactatctg
gccccgctggactactacatttatgaagctgaggacgcagaacccctcgacagcactgaa
tctgaggacgcagcacccccggacagcagtgaccctgaggacgcagcaccgccggacagc
agtggccctgaggacgcagcacccctcgacagcagtagctctgaggacgcagcacccccg
gacagctcatctttggttaatccactcactcccacgggtccagcactgcccaaatgtgag
caatattaccgtgagcaaggctacgacttcatcctcagtgatggacagtatgtcctgact
aaacgagagaagaggagcacacggcaacgaaggcaggaccagtatgtagccccagagcct
ggtcaagccacgcagcaggtcctccccagagagcgccggcccggtttccccgtcacctgg
accggccctgggttcatgcgggcgcaacatggagccgtcctcaggttcaccgttcccaac
atcccagcagcctccctccagtaccacctgcttctgcactatgaaccgcagtcctcagat
gactggagtgccactatcagagttgtgtcctcgggacctctagactatgggaggtgtcca
aacgtcccatccacagatatgtacctgacactgtcagctaccaacagggtggctcgtttg
gactccacggtctgtttggaagctggagtggaatactctgtggatgtcactctaagaagg
ttgtccagtccagactcacagtccagcagatacatcctcattgactcgttgggcctggtc
ccccaggtgcactctagagctaaccctaaccctgaccctaaccctaacccccggtgcctg
gaggccactgagctgcagcagtaccgctgtgtggagctgctgcaggctggaactcctcca
gagcagtgcaaaggcctcgtcagcagcgtgtctgccctcgtccacaatggggccattccc
tgcgactgtaattctgagggggcttacagagaaacctgcgctaagtttgggggtcagtgt
gagtgtaagccaaatgtgattggccgctgctgtgactcctgtgccccactgacctatggc
tttggaccgaatggatgcacagcctgtgagtgtgactccagtggctcaaccgcggagctc
tgtgacgggacaactggccagtgtccgtgtcgtgcagaggtcactggccggcactgtgac
cagtgtctgcccggccattatggctttcctcaatgctccccctgccagtgcaatggactc
gctgacctctgtgaccccgtgagtggagcatgtcaggactgccggggccactccactgga
cacacctgtgacaggtgtattcctggttactatggagacccagtcttcagagaaccctgc
gagccgtgcacgtgcccagatgtggaggacagtggccgtttcttcgccctgtcctgcagc
aaggacgacgacaccggcagcctcgcctgcgactgcctcaggggccacgaaggagctcgc
tgtgacagctgcgcgcctggtttctatggagacctggcgttgcctggcgcccaatgcgag
gagtgtcgctgcaacaacaacactgacccccgggacgctgatgcctgtgacacagtgact
ggcgactgtctgcgctgcctgcacaacacccagggatcctcctgcgagcgctgtagacca
gggtactatggcgatgctctggtgcaagactgtaaagagtgctcctgtgaccggcgtggc
actgaggtgacccgatgcccgctggacagcccgtgtttctgtgacgaggagactgggcag
tgcccctgccgcggaggtgtgataggccctctctgtaatgagtgtgatgatggctactgg
aacctggatggtgattcagggtgccagccttgcaaatgtgaacgtgatcactcgctcaac
aacacctgtgacaagatcacaggccagtgcccctgcctgccagagtatgggggacaacag
tgttacgagtgtgcagagaattactttggagacccagacgtacagtgcctttactgtgac
tgtaatatggagggcaccctgcggcctgcctgtgccatggacacgggcgagtgtcgctgc
cgccccggagtgatgggcatcctctgtgacgagtgcgcccccggccacgagtccgtgttc
cccgagtgccaaccgtgccacccctgctccttgctctgggctgaaaatgtcacggacgtc
aagagggcggcggagaagatgcgaaccctcgtgcctaagcctggtgacgataagcagccc
gctcacggtcagcgctggcagcgcgtcctggacatgcagtctcagctggaggcagctctg
aacatgacaggagacgcccaggctgacctggatgctgcagaggatctgtactcccgtgtt
ctgaagttgaaagacagcatagatcccagtgtcattatcattgacccaacatcacttctg
aacacggaaatagataacatcaagctggagttccagaaagtcatagacaagttaatagag
aaaacaaaggaagtcccaataacagacccccaggctctgaatgacacactggaggaagtg
agacagcattataaagacttcatcaaagatgaggagcgggtcaaggacgcggacgctaaa
ctagactcgtcccgggagctcaggcagaagagcaagctggagctgagcaagtgtcacacg
ggagactgggacaccttggagaagaaaatcaaagctttaaccgtgaccaagctcaacgaa
aatgtgtgtggagctccaggcgacgcggactgctccgaggcccggtgcgggggtgcgttg
tgtcagactgacgctcagaagcgcaagtgtggaggccccggctgccggggcagtgttcct
gtgagccacaacgcctcggagacagcggagaagaccgagaatgacatccttgatctgctc
cacaaactcagagattcagcgattaagattaacgaggccaaagatatgaatgaagagatt
aaagacgaagccgtgaagatgaaacagaagatcacagacagtaagagccaatttgagaag
gagaaaaatggcaccaaggatctccttaagaaggttaaggactacctcactgatgagatg
gtgaagccagaggacattgagaaaatggccaaagcagtcttagctattcagttgcccagc
actccagatgaaatccagaccatgatccagaacatccgggacgtgctggccaacttcacg
gactttaaggaagacctcgagctcctgaaggataaagccaagactgcagaggaactgcgt
gaacaagccgaggatgtcaaaaaccgaaccaagaatattgatgtgagtgacattcggaag
accttacaggaggctgaccagttacatgataaggtctcggatggcctggacgttgccaag
gccaacacagacgaagctgccgacaaagtgaaaaagactgacagaaaactggacaacata
gaggctctgttgagtccaaatgtaaaaggcgtgctggacgacatcgaagctttgaagaag
aaaactgaaatgaacagagtgcaggcggaggacgctctagcagcagccgaggcagcttta
aaggatgccacagacgtcgacacggatgttaaagaagtaattgacctgtttgaaacacta
aaagacacggccgccaatcagacggttaatgatgaggtgagcgagcgtgtgaaaaacatc
acagctgaagtggaaagcttggccaaagatgtggctgacaagatgaagaaaatcgaagac
ttggaaaaaagattccagaaaaacctccaaagtaaagaggataaagagaacgatgttgct
cggctgttggaagaggccgctgacctcaggagggagatcggccagagggcggacgcctac
ctaaagtgcacctcctga
DBGET
integrated database retrieval system