Clupea harengus (Atlantic herring): 105896055
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Entry
105896055 CDS
T09045
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105896055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105896055
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105896055
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105896055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
Prok-RING_4
zf-ANAPC11
ASTN_1_2_N
zf-C3H2C3
zf-C3HC4_3
Prok-RING_1
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
105896055
NCBI-ProteinID:
XP_031428284
Ensembl:
ENSCHAG00000007072
UniProt:
A0A6P8FPI0
LinkDB
All DBs
Position
8:24235954..24311394
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AA seq
851 aa
AA seq
DB search
MTVLQRRLAGLWPWLLMAALQVVFGQTGVVLAATVESERSTTRAVIKVTLLKHDPSGRPI
TLEGVFAGGSAGYAEGKLMQSHPLSLCNTSEDERQESSFISIVKLESPERKVPQCLPLLE
KARLALERGAQAVIFDVTDDVNAERELQDADSLPRPVVLVRASNAEDLMGLVNKNEEAKV
TIDIMMEVQKWPHYDVVILLTVVLAVLAIVMIFAFRYRCKSNRTLDSVQQETVRAISRLE
TRTYSSQGCSGSQRHHGARGSGSSSNSSPVCAICLEEFLDGQDLRVISCAHEFHRECVDP
WLLQHRTCPLCMHNIMGAEIAAARLLHSRRMQPPPPEHSQAFLHAHPYPGPHRYQQHAIP
FSLQPSYHRSGPSGPYPPLGHYRGSPPIHPRTLRCMQPNRPLATNCGYQLAPEGHHGGRA
HRTTGAICRSAGHLGAPSLYPAPRRSCHVYRCAPGTRPQHAPGVAGGGAQQARAGAAHTR
QEDGSCSGGSYRTERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRS
SLSSDYDPFVYRPGRAPRRDSLEGSRPRSLDSVMNRGATGGCGDEVLLPPPAVFSHVHYH
RHRHHYYDDGEHGQAQGPGRGSDEELGAPTMAPSTAASGPAPAMDKDSPLCPLTHPSCQC
PKMGPSDRSSHGGSEGPDWDLDPPSSPPGLVSAAPLPSAPPPCCHQGPGPRQHWRAVGGC
GLDASPAMPAVRFHQSLDLQDDCSIHIHYGQGPAGYCCPPPDMPAALLPVPLILDSAGMG
DWPCCGGAHVVWQKRVQQAHSEPQLLEPVAPAADGHRCRRHRGPGAELPADICLYCQTLH
NNQGSEEESGV
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttctccagcggcgattggccgggctctggccgtggctgctaatggcggccctt
caggtggtttttggccagactggcgtggtgctggcggctacagtggagtcggagcgatca
accaccagagcggtcatcaaggtgactcttctcaaacacgatccgtcagggaggcctatc
actctggaaggggtgtttgctggagggagcgccggctacgcagaagggaaattaatgcag
tctcacccgctgtccctgtgcaacaccagcgaagatgagcgtcaggagagcagcttcatc
agcatcgtcaagcttgagagccccgagcgcaaggtgccccagtgcctgccactgctggag
aaggctcggctggctctggagagaggtgctcaggctgttatctttgatgtcactgatgat
gtcaatgctgaacgtgagctgcaggacgcggactctctgccccggcccgtggttcttgtg
cgcgccagcaacgctgaggatctcatgggtcttgtcaacaagaacgaggaggccaaggtc
accatcgacatcatgatggaggtgcagaaatggccccactatgacgttgtcatcctgctc
actgtggtgctggcagttctggccatcgtcatgatcttcgctttccgctaccgctgcaag
tccaacagaaccttggactcggtgcaacaggagacggtgcgcgccatcagcagactggag
acgcggacctacagctcccagggctgctctgggtcacagcgccaccatggggcccggggg
tctggcagcagctccaactccagccctgtctgcgccatctgcctcgaggagtttctggat
ggacaggatctgagggtcatctcgtgtgcacatgagttccatagggagtgtgtggacccc
tggctgctgcagcatcgcacctgtcctctctgcatgcacaacatcatgggcgcagagata
gctgccgcccggctgctccacagtcgccgcatgcagccgccgccccccgagcacagccag
gccttcctgcacgcccacccttaccccggcccccaccgctaccagcagcacgccatcccc
ttttccctgcagccctcctaccaccgcagcggcccctccgggccgtaccctccgctgggc
cactaccggggctccccccccatccacccgcggacgctgcgctgcatgcagcccaacagg
cccctggccaccaactgcggctaccagctggcgcctgagggccaccacggcgggcgcgca
cacaggacaactggggctatttgccggagcgcggggcacctgggcgcgccgtccctgtac
cccgcgccgcggcgctcctgccacgtgtaccgctgtgcccccggcacgcggccacagcac
gcgccgggcgttgccggtggcggcgcccagcaagcccgcgccggggcggcccacacccgg
caggaggacggcagctgctcggggggcagctaccggacggagcgcagcggctacctggcg
gacgggccggccagcgactccagctcggggccctgccacggctcgtccagcgactccgtc
ctcaactgcaccgacgtcagcctgcagggcgtctacggcagctggtccaccttccgcagc
tcgctcagcagcgactacgacccctttgtgtaccggccgggccgagcgccacgcagggac
agcttggagggcagccgcccgcgctccctggactccgtcatgaaccggggggccacgggg
ggctgcggggacgaggtgctgctgccgccacccgccgtctttagccacgtgcactaccac
agacacaggcaccattactacgacgacggcgagcacgggcaggctcaggggccgggccgc
ggctccgacgaggagcttggcgcgccgacgatggcgccgtcaaccgcggccagcggcccc
gctcctgccatggacaaggactcgcccttgtgcccgctcacacacccctcctgccagtgc
cccaaaatgggcccctcagacaggtcaagccacggagggtcggaagggccggactgggac
ttggatcccccctcctctcctccgggcctggtgtcggcagcaccgctgccctccgctcct
cctccctgctgccaccaaggccccggcccccggcagcactggcgggcggtgggcggttgc
ggactggacgcctctccggcgatgccagcggtgcgcttccaccagagcctggacctgcag
gacgactgcagcatccacattcactacggccagggccccgccggctactgctgcccgccg
ccagacatgcccgccgctctgctgcccgtgcccctcatcctggactcggcgggcatgggc
gactggccgtgctgcggcggggcccacgtcgtgtggcagaagcgcgtgcagcaggcacac
tcggagccccagctcctggagcccgtggcccccgcggccgacggacaccgctgtaggcgc
caccgtggccccggggccgagctgcccgcggacatctgcctgtactgccaaacactacat
aacaatcagggatcagaggaggagtctggtgtgtga
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