Clupea harengus (Atlantic herring): 105896056
Help
Entry
105896056 CDS
T09045
Name
(RefSeq) peripheral-type benzodiazepine receptor-associated protein 1 isoform X1
KO
K19922
peripheral-type benzodiazepine receptor-associated protein 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105896056
Membrane trafficking [BR:
char04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
105896056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIMB1_N
Ig_RIMBP2
SH3_2
SH3_9
SH3_1
fn3
RAP1
Motif
Other DBs
NCBI-GeneID:
105896056
NCBI-ProteinID:
XP_042564493
UniProt:
A0A8M1KQ33
LinkDB
All DBs
Position
8:24136084..24214617
Genome browser
AA seq
2006 aa
AA seq
DB search
MGKDKGNSLVFSSKRGSRCGTRSCASPGEPEREIERLRDALEAERCRNKQAYRKFSLELR
RVRDEGRHERERALRELTSRQERQKALELQQQREALGRERASEFRQLRHWRDRERERSSV
SFRQVRELQRLLAEGLGGGTGLGKLDPQAVKGLLCGQGSGAIYRKLEELLARLHGQASGE
QAVLLQGLRQELELDKSRLICHLLEKHGHPQAPKVAPTPVPRRRSASCVHLLSRSDSQGN
QGAPGNPGSAPPSRARSQSQKAQRSSQQGPLRKWSRSGRRSAAPLGKPQRSSSPVASQEI
PSQPSPHAGWEVRHSSSSPSDPSPTPDNSTPSRCSEEDMNGMDYGFLVRQNSELLRALDD
LEKTCATLKEENSLLRKSSSPETEEKVKRLRKKNTELAVIAKRLEDRARKLQEANLKVVN
SPFPVKAGAVEQYKRAFARQRARDLAQHADTLLYKDKEIAALQQECRELQTGLGQGKGVQ
GPFAVADFERLLRESQKEVLRLQRQLSVSSAREASHTVAPDSTDKAAAETPPPALNEAPP
RREETPAEEAEPGPQVTPQSSPSPTQPEKQTEETRIEFLESELSKKRKECESLEHDVRKR
QKRCLDLESQLDDERGKNERLAEEAELLRRKAQLLDQSQAENEELRQELSELSAQHNSVL
EENQRLRAKLENLEQVLKHMREVAERRQQLELDHDQALAILKFKQDEIKRLQRAQVFAKR
EHEGVVQVLEELIQLVLRRELSKVRDLEDKCRSQSEQFGLLSQELEKFRLQASKIDLDSS
DLLSHPSLAHLTNGLPGETGASDAEVMLSLGDIAFWTLEGTDVPPCVASEQVDVEAMLRA
GSTPHAVGLSRPERSPATKHRELPTISAKSASTSSTTKSDTTHLTPRSESRPHSPRKASP
THEVDTASEVEELDIDVSPAPYPASRGAAKLQVFISRYSYNPYDGPNDNPEVELPLTAGE
YIYVYGDMDDDGFFEGELMDGRRGLVPSNFVERVSDDDVMSAQAHEAGEQSHNSFQDSSL
HSGSERFQHHNHQQHVRFGPTTTTTTTSERTDASIAPSPTPDPTLGKASPTPALTVPITN
GLDLELEEVDVVPYPRKLTLIKQLAKSVIIGWEPPLVPAGWGSIWSYNIFVDQELRLNVP
FGSQHKAVLERLDVGLKAYRVSVQSLTERGNSDQLRCSLLVGADVCVAPTQLRVERVSAT
SATLVWLPCNSNYVHIVSLNEEECELVKAGCYSLCLSNLTPNLHYCVKVEARPHRTPWEL
PQDRRERRITVTSFSTLPAGPPDAPLDVQLEQGPSPGIALVSWLPVTIDAAGTSNGVAVT
GYTIYADKKKVLEVASPTAGSALLGPSQIQAVKAAQELTVRTMSPHGESSDSVPMNVQAK
LAAIMAGPVPPSLPVPVLTAAAAAAVPTSPAVSPRLANSPAKSPVPYSLPPDAHTLVPGR
GVYANTPKAITANAPLPSGSYTEAWANPHVSGASMPMAMAVQQPPALPPSSAISYPAVCV
PQVSVAVPSCVSPSLDPSRDMESPVPMPGAGRPVVCMSDFLEDPRAKPHHPEPCPVPVLR
PPAPYVDSLNPPETHPMRPPNPSPFGSEAEEDLENTRLVSIEEFLGHGRPAVRHQAYGGG
VAEPSVDYQLETSRGSDLSDILEEEEEDMYSESIAEVQGRGYLRDATGEAGPAWCPQEGM
APQLTRSEARQMKEVEEAGRLIGENTVRVFVALFPYDPVSMSPNPDAAEEELPFREGQII
KVYGDKDADGFFHGECNGRMGYIPCNMVSEIQVDDTETRDQLLQQGFLTTEASMDKIVES
AGVWEDRSLVDSSSQDRSQSGAAMGNPGPLHQPRRMVAIFDYDPRESSPNADIEAELTFS
AGDIIYVLGDMDADGFFYGDLNGHKGLVPSNFLQPFPETAEEAAGPAAMDHLVVMDARRD
PQMSEATSLEQEDPAAAAEPDEAPPPEPGPGPLPETLASPSCGPVPLTPASDGALLTDLS
PSGKKKKGFFSKGKRLFKKLGSSKKE
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggacaagggtaactctctggttttctcctccaagagaggctcgaggtgcggc
acgcgctcctgcgccagtcctggcgagcccgagcgcgagatcgagaggctccgcgacgcc
ttggaggcggagaggtgccgcaacaagcaggcctacaggaagttctccctggagctgcgg
cgcgtgcgcgacgaggggcggcacgagcgggagcgcgccctgcgggagctgacctccagg
caggagcggcagaaggccctggagctgcagcagcagcgcgaggccctgggcagggagcgt
gcctccgagttcaggcagctgcgccactggagggaccgcgagagggagcgcagcagcgtc
agcttcaggcaggtccgggaactgcagcggctcctagccgaggggcttggtggcggcacc
ggtttgggcaagcttgaccctcaggccgtgaagggtctgctgtgcggccaaggcagcggt
gccatctaccgcaagctggaagagctgctggcaaggctgcatgggcaggcgagcggggag
caggcggtgctcctgcagggcctgcgccaggagctggagctggacaagagccgcctcatc
tgccacctgctagagaagcacgggcatcctcaggcccccaaggtggccccgaccccagtg
cccaggcgccgctcggccagctgcgtgcacctgctcagccgctccgactcccaggggaac
caaggcgctcccggcaaccctggaagcgcccccccgtctcgtgccaggtctcagtcccag
aaggcccagcggtcttctcagcaggggccgctgaggaagtggagcaggagcgggcgcagg
agcgctgcacccctggggaagccgcagcgcagctccagtcccgtggcgagccaggagatc
ccctcgcagccctctccccacgcaggctgggaggtgaggcactcctcctcctccccatcg
gacccgtcccccacgccagacaactcaaccccgtccagatgctcagaggaggacatgaat
ggaatggactatggcttcctggtgcgtcagaactctgagttgctgcgggcactggatgac
ctggagaagacctgtgctactctcaaagaggagaacagccttctgaggaagagcagctcc
ccggagacggaagagaaggtgaagagactgcggaagaagaacacggagttggcggtcatt
gctaaaaggctggaagacagggcacgcaagctccaggaggcgaaccttaaagtggtgaac
agccctttcccggtgaaagctggcgcagtggagcagtacaagagggcgttcgcgcggcag
agagcgcgggacctggcccagcacgcagacacgctgctctacaaggacaaggagatcgct
gccctgcagcaggagtgcagggagctgcagacgggcctcggacagggcaagggtgtgcag
ggtcccttcgctgtggctgatttcgagcgtctgctgcgtgagtctcagaaggaggtgctg
aggctgcagcggcagctctccgtcagctccgcacgcgaggccagccacaccgtggccccc
gactccaccgacaaggccgcggccgagactccgcccccagcgttaaatgaggctcctccc
aggcgcgaggagactcctgcagaggaggcggagccggggccacaagtgacgcctcagtcg
agtcccagccccacccaaccggagaagcagactgaggagacgcgtatagagtttctggaa
agtgagttgagcaaaaagagaaaagaatgtgaaagtcttgagcatgatgttaggaagagg
cagaagagatgtctggatttggagagccagctcgatgacgagcgaggcaaaaatgagaga
ttagccgaggaggcagaactcctcaggcggaaggctcagctgcttgaccagtcccaggct
gagaatgaggagctgaggcaggagctctctgaattgagcgctcaacacaattcagttctc
gaggagaaccagagactccgtgccaaactggagaacttagagcaggtcctaaagcacatg
cgagaggtcgctgagcggaggcagcagctggaactggaccatgatcaggcactggcgatc
ctcaagttcaagcaggatgagatcaagcggctgcagcgggcccaggtatttgccaaacgg
gagcatgagggtgtcgttcaggtgctggaggagttgatccagcttgtgttgcggagggag
ctgtcaaaggtgcgtgatctggaggataaatgccgcagtcagagcgagcagttcggcctg
ctctctcaggagctggagaagttccggctgcaggcctccaagatcgacctggacagctcc
gacctgctgtcccaccccagcctcgcccacctgaccaacggcctcccgggggagacaggc
gctagtgacgcagaggtcatgctctccctcggggatattgccttctggactttggagggg
accgacgttcccccctgtgtcgcctcggaacaggtggacgtcgaggccatgctgagggcc
ggctccaccccccacgccgtagggctgtccaggcccgagcgctcccccgccaccaagcac
cgcgagctgcccaccatcagcgccaagtccgcctccacctccagcaccaccaagtccgac
accacccacctcacacccagatcagagtcccgaccacacagtccacgcaaggccagtccc
acacatgaggtggacacggccagtgaagtagaggaattggacatagatgtgtctcctgct
ccctatcctgcaagcagaggggctgccaaactacaggtcttcatttccagatacagctat
aacccctatgacggccccaatgataacccagaagtggagctccctctcaccgcgggagag
tatatttatgtgtatggggatatggatgacgatggcttctttgaaggtgagctgatggac
ggacggagagggctggtcccctccaacttcgtggagcgcgtgtcggacgacgacgtcatg
agtgcccaggctcacgaggccggagagcagtcccacaactccttccaggacagcagcctc
cacagcggcagcgagcgcttccagcaccacaaccaccagcagcacgtgcgcttcggcccc
accaccaccaccaccaccacctcggagcggaccgacgcctcgatcgccccctcccccacc
ccagaccccaccctgggcaaggcgtcccccaccccagccctcacagtccccatcaccaac
ggcctggacctggagctggaggaggtggacgtagtgccttacccacgcaagctcaccctc
atcaagcagctggccaagagcgtcatcatcggatgggagcctccgctggtgccggccggc
tggggctccatctggagctacaacatcttcgtggaccaggagctgcggctcaacgtgccg
ttcggctcccagcacaaggccgtgctggagcgcctggacgtgggcctcaaggcgtaccgc
gtgtccgtgcagagcctcaccgagcggggcaactcggaccagctgcgctgcagcctgctg
gtgggcgccgacgtgtgcgtggcgcccacgcagctgcgggtggagcgcgtctccgccacc
tcggccacgctggtgtggctaccctgcaacagcaactacgtgcacatcgtgtccttgaac
gaggaggagtgcgagctggtcaaggccggctgctactcgctctgcctcagcaacctcacg
cccaacctgcactactgcgtcaaggtggaggcgcggccgcaccgcacgccctgggagctg
ccgcaggaccgccgcgagcgcaggatcacggtcacctccttcagcacgctccccgctggt
cccccagatgcccctctggatgtgcagctggagcaggggccgtctccagggatcgccttg
gtcagttggctgcctgtcactattgacgctgctgggacctcaaacggggtcgccgtcacg
ggctacaccatttacgcagacaagaagaaggtgctggaggtggcatcacccacggcaggc
agtgctctgctgggcccgtctcagatccaggcggtgaaggcggctcaggagctcaccgtg
cgcaccatgtccccccacggcgagtcttccgactcagtgcccatgaacgtccaggccaaa
ctcgctgccatcatggcaggacccgtgcccccaagcctacctgtgccagttctgacagcc
gccgccgctgctgctgtgcccacctcacctgccgtgtcgccccgcctcgccaattcgcct
gccaaatcgccagtgccctacagcttgccgccagatgcacacacgttggtccccggcagg
ggggtctatgccaacactcccaaagccatcaccgcgaatgcccccctgccctccggctcc
tacacggaggcctgggcaaaccctcacgtgtcaggtgcctccatgcccatggccatggca
gtacagcagcctccagcgttaccaccatcttctgccatcagctacccagcggtctgtgta
ccgcaggtgagcgtggccgtgccatcctgcgtctccccgtcgctggatcccagcagggac
atggagagccccgtgcccatgcccggggccgggcggcccgtcgtctgcatgtccgacttc
ctggaggacccccgtgccaagccccaccatcccgagccctgccccgtgcccgtgcttcga
cctccggcaccgtacgtggactccctcaaccccccagagacgcacccgatgcggcccccc
aacccgtccccgtttgggtcggaggctgaggaggacctggagaacacgcggctggtgtcc
attgaggagttcctgggccacgggaggccagctgtcagacaccaggcttatggcggcggt
gtggcagaaccgagcgttgactaccagctggagaccagccgaggctcagacctgtctgac
atcctggaggaggaggaggaggacatgtactcagagtccatcgcagaggtgcagggcagg
ggctacctcagggatgccacaggcgaggccggccctgcatggtgccctcaggaggggatg
gcccctcaactcacccgctctgaagccaggcagatgaaagaggttgaagaggccgggaga
ctgataggagagaacacggtgagggttttcgtggccctgttcccatacgaccctgtcagc
atgtcacctaatcctgacgcggccgaggaggagcttccctttcgagagggtcagatcatc
aaggtatacggtgacaaagatgccgatggtttcttccacggcgagtgtaacggccggatg
ggctacatcccctgcaacatggtgtctgagatccaggtggacgacacggagacacgtgac
cagctgctgcagcaaggcttcctcaccaccgaggcctccatggataagatagtggaatcg
gccggagtctgggaggaccgctctctggttgactcttccagtcaagaccggagccaatca
ggggcagccatggggaacccaggacccctccaccagccacgcagaatggtggccatcttt
gactacgatccacgagagagctctcccaacgcagacatagaggccgagctgaccttcagt
gcgggggacatcatctatgtgctcggtgacatggacgccgatggcttcttctatggagac
ctgaacggacacaaaggcctggtcccgtccaacttcctgcagcctttccctgagacggca
gaggaggcggctgggcctgcagcgatggaccaccttgtcgtgatggacgccaggagagac
ccacagatgagtgaggcgacgtccctggagcaggaggacccagcggcggctgctgaacca
gacgaggcccccccaccagagcctggcccaggcccgctccctgagacgctggccagcccc
agctgtggccctgtccccctgacgccagcctccgacggcgccctgctcacagacctatcc
ccctccggcaagaagaagaagggcttcttctccaaagggaagaggctgtttaagaagctg
ggctccagcaagaaggagtga
DBGET
integrated database retrieval system
