Clupea harengus (Atlantic herring): 105896100
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Entry
105896100 CDS
T09045
Symbol
ppp2r2aa
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03015
mRNA surveillance pathway
char04261
Adrenergic signaling in cardiomyocytes
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105896100 (ppp2r2aa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105896100 (ppp2r2aa)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
105896100 (ppp2r2aa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105896100 (ppp2r2aa)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105896100 (ppp2r2aa)
03036 Chromosome and associated proteins [BR:
char03036
]
105896100 (ppp2r2aa)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
105896100 (ppp2r2aa)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
105896100 (ppp2r2aa)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
105896100 (ppp2r2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
TFIIIC_delta
Motif
Other DBs
NCBI-GeneID:
105896100
NCBI-ProteinID:
XP_042564252
Ensembl:
ENSCHAG00000018377
UniProt:
A0A8M1KK56
LinkDB
All DBs
Position
7:complement(25056096..25066124)
Genome browser
AA seq
450 aa
AA seq
DB search
MAGAGDGDNEVQWCFSQVKGAFDDDIAEADIISTVEFSHSGELLATGDKGGRVVIFQQDP
ESKSQPLCRGQYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNASQFLLSTNDKTI
KLWKISERDKRPEGYNLKEEDGRYRDPSTVTALRVPIFQPMDLMVEASPRRIFANAHTYH
INSISVNSDNETXPGLTDGPAPVNLLEPGDHRPPAFNIVDIKPANMEELTEVITAAEFHP
HACNTFVYSSSKGTIRLCDMRASALCDQHSKLFEEQEDPSRRSFFSEIISSISDVKFSHS
GRYMMTRDYLSVKIWDLNMESRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWSGDDSV
VMTGSYNNFFRMFERGGRQDVTLEASREVSQPLMALKPRRVCAGGKRRKDEVGVDSLDFS
RKILHTTWHPHDNIIAVATTNNLYIFQDKR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgctggtgacggggacaatgaggtccagtggtgcttctctcaggtcaagggg
gcgtttgatgatgacatcgctgaagctgacatcatctccacagtggagttcagccactca
ggggagctgctggccactggagacaaaggaggcagggtggtcatcttccagcaggaccca
gagagcaagagccagcctctgtgtcgagggcagtataacgtgtacagcaccttccagagc
cacgagcctgagtttgactacctgaagagtctggagatcgaggagaagatcaacaagatc
cgctggctaccccagaagaacgcgtcccagttcctgctgtccacaaacgataaaaccatt
aagctgtggaagatcagtgagagagataagagacctgaaggctacaacttgaaggaggaa
gatggacgttacagagatcccagcacagtcactgctctacgggtacccatattccaaccc
atggacctgatggtggaggccagtccacggcgaatctttgccaacgcacacacctaccac
atcaactccatctccgtcaacagcgacaacgagacctaacctggtctgaccgacggaccg
gcgccggtcaacctgctggaacctggagatcaccgaccgccagcattcaacattgtagac
ataaagccggccaacatggaggagctgacggaggtgatcactgcggccgagttccacccc
cacgcgtgcaacaccttcgtctacagcagcagcaagggcaccatccgcctgtgtgacatg
cgcgcgtcagcgctctgcgaccagcactccaaactgtttgaggagcaggaggaccccagc
cgccggtcgttcttctcggagatcatctcctccatctcagacgtcaagttcagccacagc
gggcgctacatgatgacccgagactacctgtccgtcaagatctgggacctcaacatggag
agccggccggtggagacctaccaggtgcatgagtacctgaggagtaagctgtgctcgctg
tatgagaacgactgcatcttcgacaagtttgagtgctgctggagtggagatgacagtgtg
gtgatgacgggctcctataataacttcttccggatgtttgagcggggcgggcgccaggac
gtgactctggaagcatcgcgggaggtcagccagccgctcatggccctgaagccacgccgc
gtgtgtgcaggcggaaaacgccggaaggacgaagtgggcgtcgacagtctggacttcagc
agaaagatcctgcacaccacctggcatccccatgacaacatcatcgccgtggctaccact
aacaacctgtatattttccaagacaagcgttaa
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