Clupea harengus (Atlantic herring): 105896117
Help
Entry
105896117 CDS
T09045
Symbol
smad10b
Name
(RefSeq) mothers against decapentaplegic homolog 4 isoform X1
KO
K04501
mothers against decapentaplegic homolog 4
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04068
FoxO signaling pathway
char04081
Hormone signaling
char04110
Cell cycle
char04310
Wnt signaling pathway
char04350
TGF-beta signaling pathway
char04371
Apelin signaling pathway
char04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105896117 (smad10b)
04350 TGF-beta signaling pathway
105896117 (smad10b)
04371 Apelin signaling pathway
105896117 (smad10b)
04068 FoxO signaling pathway
105896117 (smad10b)
09133 Signaling molecules and interaction
04081 Hormone signaling
105896117 (smad10b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
105896117 (smad10b)
09144 Cellular community - eukaryotes
04520 Adherens junction
105896117 (smad10b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
Motif
Other DBs
NCBI-GeneID:
105896117
NCBI-ProteinID:
XP_031431777
Ensembl:
ENSCHAG00000006704
UniProt:
A0A6P8G8A6
LinkDB
All DBs
Position
11:17833173..17843856
Genome browser
AA seq
587 aa
AA seq
DB search
MELLMEERNFEAPLQFRLTCTSSPDLRMSVNAPNSNDACLSIVHSLMCHRQGGENEGFAK
RAIESLVKKLKEKKDELDSLITAITTNGVHPSKCVTIQRTLDGRLQVAGRKGFPHVIYAR
LWRWPDLHKNELKHVKFCQYAFDLKYDNVCVNPYHYERVVSPGIVGLSIQNTGPPGRLIK
EEYTHDCIQMDIPPSRMPSQSNHHSTDHYRQPLPPLQLHAESSHPTPVSHYGNIPHSPPA
TGPMMSMQGGHNEGLLQIASPRSLASTPPPSTPNHGPPQTPSSQSDYGTPKHSQSQGSFH
TTWTGSSTASYTPVGPQQNGRSHPQSSHQQPPHHFWSQHHTPASFPQPVSNHPGPEFWCS
ISYFEMDIQVGEMFKVPANCPVVTVDGYVDPSGGDRFCLGQLSNVHRTDASERARLHIGK
GVQLECRGEGDVWMRCLSDHAVFVQSYYLDREAGRAPGDAVHKIYPGAYIKVFDLRQCHR
QMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIAPAVSLSAAAGIGVDDLRRLCILRLSF
VKGWGPDYPRQSIKHTPCWVEVHLHRALQLLDEVLHSMPLADPGPAN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggaactattaatggaagaacgaaactttgaagctccgctacaatttcgtctcacttgt
acaagttctcccgatttgagaatgtctgtgaatgcccccaatagtaatgatgcatgtctg
agcatcgtgcacagcctaatgtgccatcggcaaggaggggagaatgagggcttcgccaaa
cgagccattgagagcctggtgaagaaactgaaggagaagaaagacgagttagactccctc
atcacggctatcacaaccaatggtgtacacccgagcaagtgtgtcaccatccagaggaca
ctggatggaagactccaggtcgctgggcgaaaaggcttcccccatgtgatatacgctcgc
ctctggcgttggccagaccttcataagaatgagctcaagcatgtgaagttctgtcagtat
gccttcgacctcaaatatgacaatgtctgtgtgaacccctaccattatgaaagggttgtg
tcacctggcatagtgggactcagtatacaaaacactggccccccagggagactaatcaag
gaggagtacacccacgactgcatccagatggacatccctccctccaggatgccctcccag
tccaaccaccactccacggatcactaccgccagccgctgccccccctgcagctacacgca
gagtcgtctcatcctacccccgtcagccactacggcaacatcccccactcaccaccagca
accggcccgatgatgtccatgcaggggggccataatgagggcctgttacagatcgcctcc
ccccggagtctggcctccacccctcccccctccacccccaaccacggccccccgcagacc
ccctccagtcagagcgactacggcacccccaaacactcccagtcccagggctccttccac
actacctggacaggctccagtacggcctcctatacacctgtaggacctcagcagaatgga
cggagtcacccacagtcttcccatcagcagccacctcatcacttctggtcccaacatcac
actcctgcctcatttcctcagccagtatccaatcatccaggtccagaattctggtgctca
atctcctactttgagatggacattcaagtgggggagatgtttaaagttccagcaaactgc
cccgtggtgaccgtggatggctacgtggatccatccggaggggaccgcttctgtctaggc
cagcttagcaacgtccaccgcactgatgctagtgagagggcccggctacacattgggaaa
ggggtgcagctggagtgtcgtggggagggcgatgtttggatgcgttgcctgagcgaccat
gccgtcttcgtgcagagctactacctggacagggaagcaggtcgagccccgggtgatgca
gttcataagatttacccaggagcttatatcaaggtgtttgacctacggcagtgccacagg
cagatgcagcagcaggcagccacagcccaagcagcagcagcggcccaggccgccgccgtg
gcaggcaacattccagggcctggcagtgtagggggcatagccccagccgtcagcctctca
gcagctgcaggtattggggtggatgacctgcgacgcctctgtatcctgcggctgagtttc
gtgaagggctgggggcccgactacccccggcagagcatcaagcacaccccctgctgggtg
gaggtccacctgcatcgagcgctgcagctgctggacgaggtgctccactccatgcccttg
gctgacccaggacctgccaactga
DBGET
integrated database retrieval system
