Clupea harengus (Atlantic herring): 105896201
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Entry
105896201 CDS
T09045
Name
(RefSeq) integrin beta-7-like isoform X2
KO
K06590
integrin beta 7
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04510
Focal adhesion
char04512
ECM-receptor interaction
char04514
Cell adhesion molecules
char04672
Intestinal immune network for IgA production
char04810
Regulation of actin cytoskeleton
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105896201
04514 Cell adhesion molecules
105896201
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105896201
09142 Cell motility
04820 Cytoskeleton in muscle cells
105896201
04810 Regulation of actin cytoskeleton
105896201
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
105896201
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105896201
04515 Cell adhesion molecules [BR:
char04515
]
105896201
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105896201
Cell adhesion molecules [BR:
char04515
]
Integrins
Integrin beta subunits
105896201
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_TEN
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
105896201
NCBI-ProteinID:
XP_012678392
Ensembl:
ENSCHAG00000017818
UniProt:
A0A6P3VQB5
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Position
8:complement(14907631..14921217)
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AA seq
799 aa
AA seq
DB search
MSSTSHASFLPVVYCFSLNSASASGGENRSKLQNIDTDRRFLQERCVILNDYISGNKRLK
AFPLPSSLSPRAMQQTWFMVIVILYCLGQNDTLGIQACQPQPTCSECLRSPGCAWCKQKD
FLKPGEANERRCDSAESLQSRKCANGQMINPKSPPEVKKDRELSSTKENVIQLKPQSIHL
KLRIGQPSEFKVSFKRAVGYPIDLYYLMDLSFSMKDDLDNIKDLGKDILTTLEQFTKDRH
IGFGSFVDKVALPYVSQLKSRLKNPCPNRLEKCQPAFSFRNVLPLTKQAERFKVEVGKQK
ISGNLDSPEAGLDAIMQSVVCRTEIGWRNVTSILVYTSDDTFHMAGDGRLAGIYSPHDGQ
CHLDGTSTYEGTLQALSELIPRSVVGVLTKDSSNVVQLISDAYRNLSSSIVFEHEHAPAG
LAISYRSLCEGGQYPNWSSRGECSGVKLDQQVNFTVRLNATACLAEMQQFSIKVQGISDI
LTVFVETFCDCDGHCQDREEKAPDCKGNGTFHCGMCSCDGMHLGQHCECEVTDDFDSMKA
LSALCRQTNKSEICDGHGDCECGKCSCHSHYRGDYCECDDKSCSQDNNMQWCNGKGSCNC
GKCLCEEGYTGESCHCPVDKRDCIKGDGLVCSGQGECPCDRCICNGKVTGKYCQSIQEPC
SKKYQTCTLCAVQKGEDCNTECDGMTTKKVPGPQEYVCLHEGLTFQVKVTDEGLIQILYA
DLPQSIDKTHVIIGSSVISILLIGIVVIIVYRLLIELYDRNEYRNFLNAQKQTTWNEQNN
PLFQEATTTVMNPLHEGDD
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcactagtcacgcttccttcctgccagtggtttattgcttcagtttgaatagt
gcgtctgcaagtgggggagaaaacagatcaaagctacagaacatagacaccgatagaaga
tttctccaagaaaggtgtgtcatcttgaatgattacatctctggaaacaagagacttaaa
gctttcccactaccctcttccctgtctccaagggcaatgcagcagacatggtttatggtg
attgttattctttattgcttgggacagaatgacaccctgggtattcaggcttgccaaccg
cagcctacatgttctgagtgtttgagaagtcctggctgtgcatggtgtaaacaaaaggac
ttcctcaagccaggagaggcgaatgaacgtcgatgtgattcggccgagtcactgcaaagt
aggaaatgtgcaaatggccaaatgatcaaccccaagtcacccccggaggtcaagaaggac
cgtgagctgagcagtacaaaagaaaatgtgatccagctgaagccacagtccattcacctc
aaactgcgaataggtcagccttctgagtttaaagtgtcattcaagcgtgccgtgggctac
cccatagacctgtactacctgatggacctcagcttttccatgaaggatgacctggacaat
atcaaggacttggggaaggacatcctcaccactctagagcagttcaccaaagacaggcac
atagggtttggatcatttgtggataaggtggcactgccgtacgttagccagctgaagtcc
agactgaagaacccatgccccaaccgcctggaaaagtgccaaccggctttcagcttccgg
aacgttctccctctgacaaaacaggcagagaggttcaaggtggaggtgggcaagcaaaag
atctccggtaacctggattcgcccgaggccggactggacgccatcatgcagtcagttgtc
tgccggactgagattggatggagaaacgtcaccagcattctggtctacacgtctgatgac
acctttcacatggcgggagatggacgactggctggaatctacagcccccacgatgggcag
tgccacctagatggcacatctacctatgagggcacactccaggcactgagtgagttgatc
cctcgctctgtggtgggggtgctgacaaaagactctagcaatgtggtgcagctcatctca
gatgcatacagaaatctgtcctcctccatagtgtttgaacatgagcatgccccagcaggc
ctggccatctcctatcgatcactctgtgagggagggcagtaccctaactggagcagccga
ggggagtgcagcggagttaaacttgaccagcaggtgaatttcactgtgcgcttgaacgca
acagcctgcctggcggagatgcagcagttcagcatcaaagtgcagggcattagtgacatc
ctaactgttttcgtggagactttctgtgactgcgacggccattgccaggaccgtgaggag
aaagcacctgactgcaaaggcaacggaacgtttcactgtggcatgtgcagctgtgatggt
atgcatcttggccagcactgtgagtgtgaggtgacagacgactttgactccatgaaggct
ctgtccgcactctgtcgtcagacaaacaaatcagagatatgcgatggccatggggactgt
gagtgcgggaaatgttcctgccatagccattatcgcggtgattactgtgaatgtgatgac
aagagctgttcccaggacaacaatatgcagtggtgcaacggcaagggctcatgcaactgt
ggcaaatgtctgtgtgaggagggatacactggtgaaagttgtcactgtcctgtggacaaa
cgggactgtattaaaggtgatggcctggtgtgcagtggacaaggcgagtgtccttgtgac
cgatgcatctgcaatgggaaagtcactgggaagtactgccagtcgatccaagagccatgt
agcaaaaagtatcagacatgcacactgtgtgccgttcagaagggggaggactgcaatacg
gaatgtgatggtatgactacaaagaaggtgcctggcccacaagaatatgtctgtcttcat
gagggactcaccttccaagtcaaagtaacagatgaaggactcatccagatactctacgca
gacctgccccaatcgattgataaaacacacgtcatcatcgggagctcagtgatcagtatt
ttgttgatcggtattgtggtgatcatcgtgtaccggctgctgatagagctgtacgaccgc
aacgaataccgcaactttctgaacgcccagaagcagactacgtggaatgaacaaaacaat
ccgctcttccaggaagccactacgaccgtcatgaaccccttgcatgaaggggatgattag
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