KEGG   Clupea harengus (Atlantic herring): 105896201
Entry
105896201         CDS       T09045                                 
Name
(RefSeq) integrin beta-7-like isoform X2
  KO
K06590  integrin beta 7
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04510  Focal adhesion
char04512  ECM-receptor interaction
char04514  Cell adhesion molecules
char04672  Intestinal immune network for IgA production
char04810  Regulation of actin cytoskeleton
char04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    105896201
   04514 Cell adhesion molecules
    105896201
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    105896201
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    105896201
   04810 Regulation of actin cytoskeleton
    105896201
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    105896201
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    105896201
   04515 Cell adhesion molecules [BR:char04515]
    105896201
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105896201
Cell adhesion molecules [BR:char04515]
 Integrins
  Integrin beta subunits
   105896201
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_TEN EGF_2 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 105896201
NCBI-ProteinID: XP_012678392
Ensembl: ENSCHAG00000017818
UniProt: A0A6P3VQB5
LinkDB
Position
8:complement(14907631..14921217)
AA seq 799 aa
MSSTSHASFLPVVYCFSLNSASASGGENRSKLQNIDTDRRFLQERCVILNDYISGNKRLK
AFPLPSSLSPRAMQQTWFMVIVILYCLGQNDTLGIQACQPQPTCSECLRSPGCAWCKQKD
FLKPGEANERRCDSAESLQSRKCANGQMINPKSPPEVKKDRELSSTKENVIQLKPQSIHL
KLRIGQPSEFKVSFKRAVGYPIDLYYLMDLSFSMKDDLDNIKDLGKDILTTLEQFTKDRH
IGFGSFVDKVALPYVSQLKSRLKNPCPNRLEKCQPAFSFRNVLPLTKQAERFKVEVGKQK
ISGNLDSPEAGLDAIMQSVVCRTEIGWRNVTSILVYTSDDTFHMAGDGRLAGIYSPHDGQ
CHLDGTSTYEGTLQALSELIPRSVVGVLTKDSSNVVQLISDAYRNLSSSIVFEHEHAPAG
LAISYRSLCEGGQYPNWSSRGECSGVKLDQQVNFTVRLNATACLAEMQQFSIKVQGISDI
LTVFVETFCDCDGHCQDREEKAPDCKGNGTFHCGMCSCDGMHLGQHCECEVTDDFDSMKA
LSALCRQTNKSEICDGHGDCECGKCSCHSHYRGDYCECDDKSCSQDNNMQWCNGKGSCNC
GKCLCEEGYTGESCHCPVDKRDCIKGDGLVCSGQGECPCDRCICNGKVTGKYCQSIQEPC
SKKYQTCTLCAVQKGEDCNTECDGMTTKKVPGPQEYVCLHEGLTFQVKVTDEGLIQILYA
DLPQSIDKTHVIIGSSVISILLIGIVVIIVYRLLIELYDRNEYRNFLNAQKQTTWNEQNN
PLFQEATTTVMNPLHEGDD
NT seq 2400 nt   +upstreamnt  +downstreamnt
atgtctagcactagtcacgcttccttcctgccagtggtttattgcttcagtttgaatagt
gcgtctgcaagtgggggagaaaacagatcaaagctacagaacatagacaccgatagaaga
tttctccaagaaaggtgtgtcatcttgaatgattacatctctggaaacaagagacttaaa
gctttcccactaccctcttccctgtctccaagggcaatgcagcagacatggtttatggtg
attgttattctttattgcttgggacagaatgacaccctgggtattcaggcttgccaaccg
cagcctacatgttctgagtgtttgagaagtcctggctgtgcatggtgtaaacaaaaggac
ttcctcaagccaggagaggcgaatgaacgtcgatgtgattcggccgagtcactgcaaagt
aggaaatgtgcaaatggccaaatgatcaaccccaagtcacccccggaggtcaagaaggac
cgtgagctgagcagtacaaaagaaaatgtgatccagctgaagccacagtccattcacctc
aaactgcgaataggtcagccttctgagtttaaagtgtcattcaagcgtgccgtgggctac
cccatagacctgtactacctgatggacctcagcttttccatgaaggatgacctggacaat
atcaaggacttggggaaggacatcctcaccactctagagcagttcaccaaagacaggcac
atagggtttggatcatttgtggataaggtggcactgccgtacgttagccagctgaagtcc
agactgaagaacccatgccccaaccgcctggaaaagtgccaaccggctttcagcttccgg
aacgttctccctctgacaaaacaggcagagaggttcaaggtggaggtgggcaagcaaaag
atctccggtaacctggattcgcccgaggccggactggacgccatcatgcagtcagttgtc
tgccggactgagattggatggagaaacgtcaccagcattctggtctacacgtctgatgac
acctttcacatggcgggagatggacgactggctggaatctacagcccccacgatgggcag
tgccacctagatggcacatctacctatgagggcacactccaggcactgagtgagttgatc
cctcgctctgtggtgggggtgctgacaaaagactctagcaatgtggtgcagctcatctca
gatgcatacagaaatctgtcctcctccatagtgtttgaacatgagcatgccccagcaggc
ctggccatctcctatcgatcactctgtgagggagggcagtaccctaactggagcagccga
ggggagtgcagcggagttaaacttgaccagcaggtgaatttcactgtgcgcttgaacgca
acagcctgcctggcggagatgcagcagttcagcatcaaagtgcagggcattagtgacatc
ctaactgttttcgtggagactttctgtgactgcgacggccattgccaggaccgtgaggag
aaagcacctgactgcaaaggcaacggaacgtttcactgtggcatgtgcagctgtgatggt
atgcatcttggccagcactgtgagtgtgaggtgacagacgactttgactccatgaaggct
ctgtccgcactctgtcgtcagacaaacaaatcagagatatgcgatggccatggggactgt
gagtgcgggaaatgttcctgccatagccattatcgcggtgattactgtgaatgtgatgac
aagagctgttcccaggacaacaatatgcagtggtgcaacggcaagggctcatgcaactgt
ggcaaatgtctgtgtgaggagggatacactggtgaaagttgtcactgtcctgtggacaaa
cgggactgtattaaaggtgatggcctggtgtgcagtggacaaggcgagtgtccttgtgac
cgatgcatctgcaatgggaaagtcactgggaagtactgccagtcgatccaagagccatgt
agcaaaaagtatcagacatgcacactgtgtgccgttcagaagggggaggactgcaatacg
gaatgtgatggtatgactacaaagaaggtgcctggcccacaagaatatgtctgtcttcat
gagggactcaccttccaagtcaaagtaacagatgaaggactcatccagatactctacgca
gacctgccccaatcgattgataaaacacacgtcatcatcgggagctcagtgatcagtatt
ttgttgatcggtattgtggtgatcatcgtgtaccggctgctgatagagctgtacgaccgc
aacgaataccgcaactttctgaacgcccagaagcagactacgtggaatgaacaaaacaat
ccgctcttccaggaagccactacgaccgtcatgaaccccttgcatgaaggggatgattag

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