Clupea harengus (Atlantic herring): 105896266
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Entry
105896266 CDS
T09045
Symbol
ssh2b
Name
(RefSeq) protein phosphatase Slingshot homolog 2b isoform X1
KO
K05766
protein phosphatase slingshot [EC:
3.1.3.16
3.1.3.48
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
105896266 (ssh2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105896266 (ssh2b)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
105896266 (ssh2b)
3.1.3.48 protein-tyrosine-phosphatase
105896266 (ssh2b)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Slingshots
105896266 (ssh2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_SSH1-like_1st
DSPc
DEK_C
PTP-SAK
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
105896266
NCBI-ProteinID:
XP_012678464
Ensembl:
ENSCHAG00000018642
UniProt:
A0A6P3VQF0
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All DBs
Position
8:complement(15039281..15064475)
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AA seq
1208 aa
AA seq
DB search
MTQGGIAAEACSSVGCLCACYGGKRMPYFKKNAVVSQTQLYQFISESFLTVKGAALFLPR
GNGSPSSSRLPAQRNKHAGDLQQHLQNMFTLLRPEDNIKLAVRLESFHPQCTRYMVVVST
NGRQDTEESVVLGMDFSPADGSCSIGMVLPLWSDTLIHLDGDGGFSVSTDNKIHVFKPVS
VQAMWSALQSLHKACEAARGHNYFPGSLFLTWVSYYQSRVASDQTRVNEWNAMQDVQSTR
PDSPLLFSDVPTERERTERLIKTRLREIMMQKDLENVTSKEIRTELEMHMTCNLREFKEY
IDNEMIVILGQMDSPTEIFDHVFLGSEWNASNLEELQNSGVQYILNVTREIDNFFPGLFE
YHNIRVYDEEATDLLAYWNDTYKFIARAKKAGAKCLVHCKMGVSRSAATVIAYAMKEYGW
DLERAFHYVKERRTITKPNPSFMRQLEEYQGILLASKQRHNKLWRSHSDGNLSDNHEPLV
KPAPGPYTLGRSNPRNQSCTQPSPSLQEFLQSLSPASTSTVAAQDPLEAPVSNGFCDPQE
GGMPISKLPQPRAATVVPEGRPDTAAVNVAETVPVGRPHPPPALHHLPPSPLAPELASGL
SEASSTVPDGNSNPPAHLSVTKAAKTFESSTQASRCVGEGPKGGLSAQVPESKSSQKCNP
TFFIDGEENEGSDDDHLSATLEQITLDAKPTLSTDHIDFFSAREKFLGLSLEGPACCPSE
QIQQHSPQERGPGLAAEPLVQEDPGNGDQQAEEVGVSVHHIITELESITHTVTPALSTAC
QSNTCCSNDNEEAGLKKAEEETASGEDPLQPAAPSGAGDRPEGTVRRATRELEQRLRQEL
DVPSAPVLASAPHSPPRRSPVHLVPKDRAEDKPPSQDSDSVTPQGHPAQTQEGTEKQDGR
VVEVKEEKDGGKKAGVPQDPQDSSTSSSSEAHIHAEKTPTSTSTTPNTECSSSKPASVSV
IHLEGVTEQESSTDKDGLFGPRTQADLREAWEMLKELGAFLWQVRSVLESSIGQSWLPGR
RAKIRDPRERAKEVEARIRQAGLTPPSLMKRSASLAKLGSLELTANDLSEWDLDPAALSP
TYWTLGTLLTDDASKKRACPQHHPSSTSPPPSLSSCPSSSSPSIHPQTSTEDTLRKEETR
CHDDATVPSSATAPRLSAHGQSGKAQDSGHTPQPVPALISVASRQQYGRTHPLRRLKKRT
VSFLYHTV
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaggcggtatagccgcagaagcatgctcttccgttggatgtttgtgtgcctgc
tacggaggcaaacgcatgccgtactttaagaagaatgccgttgtttctcagacccagctt
tatcaatttatcagcgagagcttcctgacagtgaaaggtgctgccctctttctcccaaga
ggcaatggctccccttcgtcctcccgtttgcctgcccagcggaacaaacatgcaggtgac
ctccagcaacacctccagaatatgtttaccctgctgcgccctgaggacaacattaaactg
gcggtgcggctggagagtttccacccccagtgtacacgttacatggtggtggtgtccacc
aacggcagacaggacacagaggagagcgtagttctgggcatggacttcagccctgctgat
ggttcctgttcgattggcatggttctcccactttggagcgacacactgatccatttggat
ggagatgggggcttcagtgtgtctacagacaacaaaatccacgtgttcaagcccgtgtct
gtccaggccatgtggtcagctctgcagtccctccacaaggcctgtgaggctgcccggggt
cataactactttccgggcagcctcttcctgacgtgggtcagctactaccagagccgcgtc
gcgtcggaccagacacgcgtcaacgagtggaacgccatgcaggacgtgcagtccacccgg
ccggactcccctctgctcttctctgacgtaccgacggaacgtgagaggacagagcggctc
attaagactcgcttacgggagatcatgatgcagaaagacctggagaacgtcacatctaaa
gagatccgcacggagctggagatgcacatgacttgtaacctgcgggagtttaaggagtac
atcgacaacgagatgatcgtcatcctgggtcagatggacagccccactgagatctttgac
cacgtgttcctgggttctgagtggaacgcctccaatctagaggaactgcagaacagcggt
gtgcagtacatcctcaatgtgaccagagagatcgacaacttcttcccgggcctgtttgag
taccacaacatccgtgtgtacgacgaggaggccacggacctgttggcctactggaatgac
acctacaaattcatagcaagggcaaagaaagccggtgccaagtgcctggtgcactgtaag
atgggcgtgagccggtcggcagcgacagtcatcgcctacgccatgaaggagtacggctgg
gacctggagcgtgccttccactatgtgaaggagcggcgcaccatcaccaagcccaacccc
tccttcatgaggcagctggaggagtatcagggcatcctgctggccagtaagcagaggcac
aataagctctggcgctcccactctgatggcaacctctctgataaccatgagccactggtg
aagccagcccctgggccctacacgctgggccgttccaacccgcgcaaccagagctgcacc
cagccctcgccctccctccaggagttcctccagagcctctccccagcctccaccagcacc
gtggcagcccaggacccgctggaggctcccgtctccaacggcttctgtgacccacaggaa
gggggcatgcctatctccaagcttcctcagccgcgggcggccaccgtggtgcctgagggg
aggcccgacacagctgcggtgaatgtggcagagacggtgccagtcggccgccctcaccca
ccaccagctctccatcaccttcccccctcgcccctcgccccagaacttgcttctggactt
tctgaggcgtcctccactgtgcctgatggaaacagcaatcctcccgcacacttatcagtg
accaaggccgcaaagacctttgaatcaagcacacaagcctctagatgtgtcggggaaggc
cccaagggtgggctgtctgcacaggtgcctgagagcaaaagcagccagaagtgtaacccc
acattcttcattgatggggaggaaaacgaggggagcgatgatgaccacctcagtgccacg
ttggagcagatcacactcgacgctaagccaactctcagcacagaccatattgatttcttc
agtgcccgagagaagttcctcggcttgtccctggagggtccagcctgctgcccttcggag
cagatccagcagcactcaccccaggagaggggcccagggctggcagctgagccacttgtc
caagaggaccctgggaacggggaccaacaggctgaggaggttggtgtgtctgtgcaccac
attatcacagaactggagtccataacgcacactgtaaccccagcccttagcactgcttgc
caatcaaacacatgctgctccaatgacaatgaagaggcgggtcttaagaaggcggaggag
gagacggcatcaggagaggaccctctccagcccgctgccccttctggtgctggtgatcgg
cccgaggggaccgtccgccgggctaccagggagctggagcagagactccggcaggagctg
gacgtcccctcggccccagtgcttgcctctgccccccacagtccccctagacggtctcca
gtccacctcgtccctaaggacagagcggaggacaagccccccagccaggactctgactca
gtcacgccgcaggggcaccctgcccagacacaagaaggtacggagaaacaggacgggagg
gtggttgaggtgaaggaagagaaagacggagggaaaaaagcgggggttccacaagatcct
caagactcaagcacatcgtcttcatcagaagcacacattcatgcagaaaaaacacccacc
agcaccagcaccactccaaacactgagtgctcctcttcaaagcccgcctccgtctcagtc
attcacctggaaggtgtcaccgagcaggaatccagcactgacaaggacggcctcttcggc
ccgcgcacccaggcagacctgcgggaggcgtgggagatgctcaaggagctgggggccttc
ctctggcaggtgcggagtgtcctggagtccagcatcggccagtcgtggctcccgggcagg
agggccaagatccgggaccccagggagcgagccaaggaggtggaggcgcgcatccgacag
gctgggctcaccccgccctcactgatgaagcgctccgcctctctggccaagctgggctcc
ctggagctgaccgccaacgacctcagtgaatgggatctggatcccgctgccctgtcgccc
acctactggacgctcggcacactgctcacagacgacgcctccaagaagagggcttgccct
cagcaccatccctcatccacctctccccctccttccctctcctcatgtccctcctcctcc
tccccctctatccatccccagacaagcacagaggacaccctgaggaaggaggagacgcgt
tgccatgacgacgccacagtgccatcgtctgccactgccccgcggctgtccgctcatggg
cagagcggtaaggcgcaggactctgggcatacgccccagccggttccagccttgatttct
gttgcctcgcggcaacagtatggaaggacacaccccctgcgcaggcttaagaaaagaacg
gtcagctttttgtatcacactgtgtga
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integrated database retrieval system
