Clupea harengus (Atlantic herring): 105896314
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Entry
105896314 CDS
T09045
Symbol
rreb1a
Name
(RefSeq) ras-responsive element-binding protein 1
KO
K20210
ras-responsive element-binding protein 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105896314 (rreb1a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105896314 (rreb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-H2C2_2
zf-H2C2_5
zf-C2H2_6
zf-Di19
zf-C2H2_8
zf-WIZ
GAGA
zf-C2H2_REST
Motif
Other DBs
NCBI-GeneID:
105896314
NCBI-ProteinID:
XP_031439578
UniProt:
A0A6P8GKS9
LinkDB
All DBs
Position
17:complement(25249890..25301497)
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AA seq
1975 aa
AA seq
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MSRRKQPNPNKVRLMENGPEDKGSGGQGGLIVTTREEGAQDQSSVIHTEEDHGEHSERTD
PEKRSENGAEGTDDGPLEETYGVELSSINSMMSTVMSAPTLSGPGVDSASCTPTKSPVLH
SKSITSRSPSISRAGRKNQAPTQNEAKEESGASFICPLCDKDCLTQHQLTMHIRQHNQDN
GAADHSCSICGKALSSASSLDRHMLVHSGERPYKCSICGQSFTTNGNMHRHSKIHIKEPA
SSIPISPLSPTKRRRPSAKRKGSQDEDGEPMDETNNKMVIEEKGTENATQGKGEDEMLPC
PICFKAFRCKSDLETHMEAHPDSSLRCDLCCLSFRTHRGLLRHNAATHHQLPTDPSGRPF
IQNNPSIPLGFNDLAFIDFSCHKFPQIAQVWCETNLRRCTSKVHRFVCDLCDKAFPLRSA
LDLHKDTHQPKESDPDPPPPSPGAEQAETTPPDELSFLGCLGLQHTSRIKPVPSEEDAYQ
AKLDSIRVIHVEQPTPSLPQEGAVLAGLGGRGFHLVDPLSLQSLSQCEALSILSLKPFQG
GFVLQPDGDAVAKPVCGEGGGLELADIQQMLRVASAASNQIVLPTLSKAPCSAMQAAGHK
HMPPLKPKPLVAPRTGMSTYTPPPLITTQASLGCISPNLPPPPNSHLLPSSREMSSASSS
SSSSSSSTVSGSQVSAERMRMEADCTGDAQMPQDSDHLLQIKSEAGQGAEADERKGSGPG
AQKASYPCRFCDQVFAFSGLLQAHMRYHLGILPHQCNICDYVAPDKATLIRHMRTHSGER
PYVCRVCYYPFTVKANCERHLRKKHMKNTRKEIEKNIKYITSTSTLSTQEATLEQVGASE
TLCRFCGDDLKTYRALQIHLRTHSGCQRKPFECRRCGAAFLTKRNCIHHLLKGHPEIQEQ
IEEHIATIPAETASQPGLNSQPVNGLPASTTTSPIVVPTLPVKVESLSLYSGELEQPLDF
SNKGLGGSNAGSPEIKVEGSTSFLLTDTDDCSMEPIDLSIPKNPEKRMKLETEVPVPLLE
QREFKKEISAISPPDHSVNQSLQTEKDEKLPLGRYQMPLTVASALNAGGPTSRSALRLKP
LLPKPVSSSSSSSTTLKELPPLASIAQIISSVSGAPDLLKRETLLESNGSPNMRREVDIT
GKVDSASKDGLLDERPLEGATKRCRKRPARYMKGADLNTGNTGSGIDLESSGEFASVEKM
LATTHTNKFSPYLQSGALEILQKEGELSLIEKSERKEPKQRLHLQQGQLARKNNLAPGQL
QQPPKGGKKNAYSNSVQKMTCPFCPRVFPWSSSLQRHMLTHTGQKPYPCAKCDALFSTKS
NCERHLLRKHGVTNRVLRRSGGMPKAKETEEGSPESAESMSETELTTAEAMDLSVADASQ
SLLLVTQKPSPPTAMSKDAPRSADTDSTQQEETAVQTDLAQNSTNITTTYEEDDDDDDDD
AHSSKSLDLNFASQLIDFKFSEHEPQSQTYPPEGSSGKTAAVEEEDSAAPLEDTKHTCKT
CGKSFRYAATLARHEKAHLCERIVERLCEENKNNCTNLKEEEEEMEAEEEKRRAAESSMD
TGSEDEDEDKEDQSDEEGGLEPKNSESDAGGEEKTKADKRKKVCSVCYKRFWSLQDLTRH
MRSHTGERPYRCATCERTFTLKHSLVRHQRIHQKPLSEVTNGGGPASSGGSASEGESSQP
GTNPHSENEQEQEQEQEPESEGAERVRELGSGQLSPQLIDRLTDQGLAQVSTADNLPEDP
KVEDLAETCRTEAKPGSPVGVGPEADTDSEMPEVAVREAEADADADSKMPEVAVREADAD
ADSDMPEEAVQKADADSEMPEVAVREADAKMPEVAVREADSEMPEVAVREADADSEMPEV
AVREADADSKMPEEAVREADAKMPEEAVREADADSDMPEEAVREADAGADSDMPEEPVRE
AGVLPSETCPQPEAEPEAEDTPSNGFIQGLLEIHTAKPSLEHTLPATELPLVGVD
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcgtaagcagcccaaccccaacaaagtcagactgatggagaatggaccagaa
gacaaggggtcgggaggccaggggggtctcatcgtgaccaccagagaggaaggagcacaa
gatcagagctctgtcatccacacagaagaagaccatggtgaacacagcgagaggaccgat
ccagagaagaggtctgagaacggggcagaaggtactgatgatggccccttggaggagacg
tatggggtggagctgtcctccatcaactccatgatgtccacagtgatgagtgcgcccaca
ctgagtgggccaggggtggattcggcgtcatgcacccccaccaagagtcccgtcctccac
agcaagagcattaccagcagatctcccagtatcagccgcgctggaaggaagaatcaggca
cccacacaaaacgaagccaaagaggagagtggcgcatctttcatctgcccactatgtgac
aaggattgcctaacccagcatcagcttactatgcacatccgccagcacaatcaggacaac
ggtgcggctgaccactcgtgcagtatctgcggcaaagccctgagctcggccagctccctg
gaccgccacatgctggttcacagcggcgagcggccctacaagtgctccatctgtggacag
agtttcaccaccaacggcaatatgcacagacattcaaagatccatatcaaggagccagcc
agttccatccccattagtccactctctcccacaaaacgcagacgtccttcagccaagagg
aagggtagccaagacgaggatggagagccgatggatgagaccaacaacaagatggttatt
gaggaaaaggggactgagaatgcaacccagggcaaaggggaagatgagatgttgccctgc
cctatctgcttcaaggccttcagatgtaagagcgatctggagacccacatggaagcgcac
cccgactccagcctaaggtgtgatctgtgctgtctctcattccgcactcaccgcggtctc
ctacgccacaatgccgccacccaccaccagcttcccacagatcccagcggtcggcctttc
atccagaacaacccctccattccccttggcttcaatgacctggccttcattgacttctct
tgccacaagttcccccagattgcacaggtatggtgtgaaaccaacctccgtcgatgcacc
agcaaagtccaccgctttgtgtgcgacctgtgtgacaaggctttccctctccgctcggct
ctggacctgcacaaagacacccaccaaccaaaagagagtgatcctgaccctccccccccc
tcccctggagctgaacaggctgagaccacaccacctgatgagctctcttttctgggctgc
ctgggcctgcagcacacctccaggatcaagcctgtgccctctgaggaagatgcataccag
gctaagctggacagcatacgtgttatccatgtggagcagcccacaccctcccttccacaa
gagggcgctgtcctggcagggctgggtgggaggggtttccacctggtagacccattgtcc
ctccagagtctctcccagtgcgaggctctaagcatcctctccctcaagccattccaggga
gggtttgtcctccagccagatggggacgctgtggctaagcctgtctgtggagaggggggg
ggtctagagctggctgacatccagcagatgctgagggtggcgtctgctgcatccaaccag
atcgtgctgcccaccttgtccaaggcgccatgcagtgccatgcaggcggctggccacaag
cacatgccgccgctgaagcccaagcccctggtggcaccacggaccggcatgagcacctac
acccctcccccgctgatcaccacacaggcttcactgggctgcatcagtcccaacctgcct
ccccccccaaacagccatctcctcccgagctccagggaaatgtcctcagcttcatcatca
tcatcttcctcctcctcctctacggtctctggcagtcaggtgtctgcggagagaatgcgg
atggaggccgactgcacgggcgatgctcaaatgccccaggactcagaccacctcctccag
atcaagagtgaggccggccagggtgctgaggctgacgagaggaagggctcgggccccggg
gcccagaaggcatcttatccctgccggttctgcgaccaggtcttcgccttctccggtttg
ctgcaggcccacatgcgctaccatttgggcatcctgccccaccagtgcaacatctgtgac
tacgtggcaccggacaaagccacactgattcgccacatgcgcacacacagcggcgagcga
ccctatgtgtgtcgtgtctgctactaccccttcactgtcaaggccaactgtgagcgccac
ctgcgcaagaagcacatgaagaacacgcggaaagagatcgagaagaacatcaagtacatc
acctccacctctacactgtccacccaagaggccacccttgagcaagtgggggccagtgag
accctttgtcgcttctgtggggatgatctcaagacctacagggccctgcagattcacctc
cgtacccacagtggttgtcagcgcaagccttttgagtgccgccgctgtggggccgctttc
ctgaccaagagaaactgcatccatcacttactcaaagggcaccctgagatccaggagcag
atcgaggagcatatagccacaataccagctgaaactgcctcgcagccaggtctaaactcc
cagccagtcaacggcctgcctgcctccaccaccacatcacctattgtggtgcccaccctt
cctgtgaaggtggagagcctgagcctctatagtggtgagctggaacaacccctggacttc
tccaacaaaggtcttggaggaagcaatgctggctcaccagaaatcaaagtagagggtagc
acctcctttctgctaactgatactgatgactgcagcatggagcccattgacctgtccata
cccaagaaccccgagaagaggatgaagctggagacggaggtgccggttcctctactggag
caaagagagttcaagaaggagatctcagccatcagccccccagaccacagtgtgaaccag
tccctacagacagagaaggatgagaagttgccgctaggacgttaccagatgcccctgacc
gtggcctcagccctcaatgcaggaggccctactagtcggtcggccctgcggctgaagcct
cttctacccaaaccagtctcctcctcctcctcctcctccaccaccctgaaggagctgcca
ccgctggcctccatagcccagatcatctcctctgtgtcaggggctccagaccttctgaag
cgagagactcttttggagagcaatggcagccctaacatgcgaagagaggtcgacattact
ggcaaagtagactcggcctccaaggatggcttgttggatgagcgccccctggagggagca
actaagaggtgcaggaaaagaccggcgagatacatgaagggggcagacctaaacacaggc
aacacgggcagtgggattgatctggagtccagtggcgagtttgccagtgttgagaagatg
ctggccaccacccacaccaacaagttcagcccctacctgcagtcaggagccttagagatc
cttcagaaggagggggagctttcactcattgagaaaagtgaacggaaggaaccgaaacaa
cggctgcaccttcagcagggccaactggcgcgcaagaacaacctggctccaggccagctg
cagcaaccgccaaagggggggaagaagaatgcctactccaattctgtgcagaagatgacc
tgtcctttctgcccgagagtcttcccctggtccagctccctgcagcggcatatgctcaca
cacacaggccaaaagccatacccatgtgccaaatgtgacgctttgttctccacaaagtca
aactgtgagcgtcacctgttgcgtaaacatggtgtgactaatagagtgctgcgtcgcagt
ggtggcatgccgaaggccaaagagacagaagagggttcacctgagagtgcagagagcatg
tctgaaacggagctcaccactgcagaagctatggacctcagtgttgctgacgcatcgcag
tcccttctccttgtcactcagaagccttcccctccaacagccatgtctaaggatgctccc
cgcagtgcggacacagacagcacccagcaggaggagactgcggtccagacagaccttgca
cagaatagtactaacatcactaccacctatgaggaggatgatgatgatgatgatgacgat
gctcacagcagcaagagtctagacctcaattttgccagccaactgatagacttcaagttc
tctgagcatgaaccgcagtcccagacatacccaccagagggaagcagcgggaagactgca
gcagtagaggaagaggactcggcagcgcccctagaggacaccaagcacacctgcaagacc
tgtgggaagagtttccgttatgctgctacacttgcccgccatgagaaggctcacctgtgc
gagcgcatcgtggagcgcctttgcgaggaaaataagaacaactgcacaaatctaaaagag
gaggaggaggagatggaggcggaggaggagaagaggagagcagcagaaagcagcatggac
actggctcagaggacgaagacgaagacaaggaggaccagagtgatgaggaaggaggcttg
gaaccaaagaacagtgagagtgatgctggaggagaagagaagaccaaggcggacaagagg
aagaaggtctgcagtgtttgctacaagcgcttctggagcctgcaggacctaaccagacac
atgcgttctcatacaggagaacggccatatcgatgtgctacttgcgagcgcaccttcact
ctgaagcacagtttggttcgccaccagcgcatccaccaaaaacctctgagtgaggtgacc
aatggtggggggccggcatcctcggggggctccgctagtgaaggagagagctcccaacct
ggcaccaaccctcactctgagaatgagcaggagcaggagcaggagcaggagccggagagt
gagggggctgagagggtaagagagctgggcagtggtcagctgagcccacagctcatagac
agacttactgaccaggggcttgcacaagtcagtacagcagataaccttccagaagaccct
aaagtggaggacctagcagagacctgcaggactgaggccaagccaggatcgccagttggg
gttgggccagaggcagacacagattcagagatgcctgaggtagccgtgcgagaggcagag
gcagacgcagacgcagactcaaagatgcctgaggtagctgtgcgagaggcagacgcagac
gcagattcagacatgcctgaagaagccgtgcaaaaggcagacgcagattcagagatgcct
gaggtagccgtgcgagaggcagacgcaaagatgcctgaggtagccgtgcgagaggcagat
tcagagatgcctgaggtagccgtgcgagaggcagacgcagattcagagatgcctgaggta
gccgtgcgagaggcagacgcagattcaaagatgcctgaagaagccgtgcgagaggcagac
gcaaagatgcctgaggaagccgtgcgagaggcagacgcagattcagacatgcctgaagaa
gccgtgcgagaggcagacgcaggcgcagattcagacatgcctgaggaacctgtgcgagag
gcaggtgtgctcccttctgagacctgccctcagccagaggcagagccggaggcagaggac
accccaagcaatggcttcatccagggactgctggagatccacacggctaagccttccctt
gagcacacgctgccagcgactgagcttcctcttgtgggggtggattaa
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