Clupea harengus (Atlantic herring): 105896343
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Entry
105896343 CDS
T09045
Name
(RefSeq) heat shock 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03040
Spliceosome
char04010
MAPK signaling pathway
char04141
Protein processing in endoplasmic reticulum
char04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105896343
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105896343
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105896343
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105896343
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105896343
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105896343
03009 Ribosome biogenesis [BR:
char03009
]
105896343
03110 Chaperones and folding catalysts [BR:
char03110
]
105896343
04131 Membrane trafficking [BR:
char04131
]
105896343
03051 Proteasome [BR:
char03051
]
105896343
03029 Mitochondrial biogenesis [BR:
char03029
]
105896343
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105896343
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
105896343
Spliceosome [BR:
char03041
]
Complex B
Other components
Prp19 complex
105896343
Complex C
Prp19-CDC5 complex
105896343
Ribosome biogenesis [BR:
char03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
105896343
Chaperones and folding catalysts [BR:
char03110
]
Heat shock proteins
HSP70 / DNAK
105896343
Membrane trafficking [BR:
char04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
105896343
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
105896343
Proteasome [BR:
char03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
105896343
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
105896343
Exosome [BR:
char04147
]
Exosomal proteins
Proteins found in most exosomes
105896343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DUF1464
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
105896343
NCBI-ProteinID:
XP_012678544
UniProt:
A0A6P3VQV1
LinkDB
All DBs
Position
26:complement(4969812..4972388)
Genome browser
AA seq
647 aa
AA seq
DB search
MSSAKGISIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
VAMNPNNTVFDAKRLIGRKFDDSVVQSDMKHWPFTVISDGGKPKVQVEYKGENKTFNPEE
ISSMVLVKMKEIAEAYMGQKVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTA
AAIAYGLDKGTTGERNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRMV
NHFVEEFKRKFKKDISQNKRALRRLRSACERAKRTLSSSSQASIEIDSLYEGIDFYTSIT
RARFEEMNSDLFRGTLEPVEKALRDAKFDKAQIHDIVLVGGSTRIPKIQKQLQDFFNGRD
LNKGINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGIETAGGVMTALIKRNT
TIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRSVPQIEVTF
DIDANGILNVSAADKSTGKENKITITNDKGRLSKEDIEKMVQDAEKYKAEDDTQREKIAA
KNSLESYAFNMKSSVEDENMKGKISEDDKKTVVEKCNQAISWLENNQLADKDEYEHQLKD
LEKMCNPIISKLYQGGMPGGMPAGGCGAQACSGAGASSQGPTIEEVD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagcaaaaggtatttccattggtattgacctgggtaccacctactcctgcgtt
ggggtgttccagcatggaaaagtggagatcattgccaacgaccagggcaacagaaccacc
ccgagttatgtggccttcacagacacagagaggctgattggtgatgctgcaaaaaatcag
gtggccatgaaccccaacaacaccgtctttgatgccaagcgtctcattggacgaaagttt
gatgattccgttgttcagtctgacatgaagcactggcccttcacagtcatcagtgatggg
ggaaagcccaaagttcaagtggagtacaaaggtgagaacaaaacatttaacccagaagaa
atctcctccatggtcctggtcaagatgaaggagattgctgaggcctacatgggacagaaa
gtaaccaatgcagtcatcaccgttcctgcctacttcaatgactcccagcgccaggccacc
aaggacgctggcgtgatcgctggactgaatgtgctgaggatcatcaacgagcccacggca
gcagccattgcttatggactggacaaaggcacgaccggtgagcgtaatgtcctcatcttt
gacctaggtggtggtacttttgatgtttctatcctaaccattgaagatggcatctttgag
gtcaaagccactgctggagacactcacctgggtggggaagactttgataatcgcatggtg
aatcactttgtggaggagttcaagaggaaatttaagaaagacattagccagaacaagagg
gcactgaggaggctgcgctcagcatgtgagagggccaagaggacactgtcctccagctcc
caggccagcattgaaatcgactctctttatgagggcattgatttctacacctccatcacc
agagctcgctttgaggagatgaactccgacctcttcaggggaacccttgagcctgtggag
aaagccctgagagatgccaagtttgacaaggcacagatccatgacattgtcttggtggga
ggttccaccagaatccccaaaatccagaagcagctgcaggatttcttcaatggaagggac
ctgaacaagggcatcaaccctgacgaggcagtggcctatggtgctgcagttcaggctgcc
attctcatgggtgacaagtctgagaacgtccaggacctactgctgctggatgtggccccc
ctgtctctgggcattgagacggctggaggtgtcatgactgccctcatcaagcgcaacacc
accatccccaccaaacagacccagaccttcaccacctactcagacaaccagcccggggtc
ctgatccaggtgtatgagggagaaagagccatgaccaaggacaacaacctgttgggcaag
tttgagctgacagggattccaccggccccacgcagtgtccctcagattgaggtgaccttt
gacattgatgccaatggaatcctcaatgtgtcagctgcagacaaaagcactggcaaagag
aacaaaataaccatcacaaatgacaaaggcaggttgagcaaggaggatattgagaaaatg
gtacaggatgcagagaagtacaaagcagaagatgacactcagagagagaagattgctgcc
aagaactccttggagtcctacgcattcaacatgaagagcagtgttgaggatgagaacatg
aaaggcaaaatcagtgaggacgacaagaagacagttgtggagaagtgcaaccaggccatc
tcctggctggagaacaaccagctggccgacaaagacgagtatgagcaccagctgaaggac
ctggagaagatgtgcaaccccatcatctccaaactgtaccaaggaggaatgcccggagga
atgccagcaggaggctgtggtgcccaggcatgcagcggcgcaggtgccagttcacagggg
cccaccattgaggaggtagactag
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