Clupea harengus (Atlantic herring): 105896349
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Entry
105896349 CDS
T09045
Symbol
slitrk2
Name
(RefSeq) SLIT and NTRK-like protein 2
KO
K25833
SLIT and NTRK-like protein 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105896349 (slitrk2)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_14
LRR_9
LRRCT
MCLC
LRRNT
Motif
Other DBs
NCBI-GeneID:
105896349
NCBI-ProteinID:
XP_012678549
UniProt:
A0A6P3VQF1
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Position
5:31560912..31565524
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AA seq
853 aa
AA seq
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MLSNVLLLSVLTMTSLSSSKTETRKMTKDICKNLCDCEEKENALNINCENKGFITISQMQ
PPQNKISQLFLNGNFLTRLNTNEFFHYGNVTSLHLGNNGLQEIKTGAFSGLKNLKRIHLN
NNNLEMIKEDTFAGLENLEYLQADYNYISIIEAGAFNKLNKLKVLILNDNLLLSLPNNIF
RFVMLTHLDLRGNRLKILPFTGVLEHIGGIMEIQLEENPWNCTCDLIPLKAWLDTISVFV
GDIVCETPFRLHGKDVTHLIKQDLCPRRNVGDPSHRGMEPSSDSQYHIPIPTLRARITPT
RAPKASRPPKMRHRPTPRVTSGKDKHVFGPIMVYQTRAPVPMTCPNVCMCTSQNSDSGLN
INCQERKLLNISDLQPTPSYPKKLHLTGNYLQVIYPTDLTEYSSLELLHLGNNRLSVIME
GAFENLSNLRRLYLNGNYIESLSQSLFAGLQSLQYLYLEYNIIKDILPQTFSALHNLQLL
FLNNNLLRSLPDHVFAGTMLTRLNLRNNHFSHLPVQGVLDQLSPFIQIDLQENPWDCTCD
IIALKNWMELSSTSVVVNEITCDSPSKHAGRLLRSLRNDAICSETNEIIATKGPGDTVSS
STEVTARFIINVTPTGSHVPEMHAEVPLSVLILGLLVVFILSVCFGAGLFVFALKRRKGI
ESIHTNVNHLDLNSYQIQYSSYNIETRGDKMDSHDYTYVPPVGEMCQNPIYTQKDSNHVT
YRNLKGLSFSTLEPKKEELAQSPSFSISTVDYQSCNNRDPELYQNIGERLKELPTAGPLN
YSFSTLPKRSVVQSYDSARRNNQDRFDKTALYGTARKYLAAQPKSDQTWLQGNFKTQPDY
LEVLERHTVMSQL
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcaacgttctgctgcttagcgtcttaaccatgaccagtttatcatcatcaaag
acagaaacccgcaaaatgacaaaagatatctgcaagaatctctgcgattgcgaggagaag
gaaaatgcattgaatatcaactgtgaaaacaagggatttatcacgatcagtcaaatgcag
cctccgcagaacaagatatcgcagctctttctgaatgggaattttttaacacgattaaat
acaaatgaatttttccactacggcaacgttacatcacttcacctaggcaacaacggattg
caggagatcaaaacaggagcattttctggtctgaaaaatcttaaacgcattcatctcaac
aacaacaatctggaaatgatcaaggaagacacatttgctggattagagaatctggagtat
ttgcaagcggattacaattacattagtatcatagaagctggagcattcaataaactgaac
aaacttaaagtcttaattctcaacgataacctattgctttcgctcccaaacaatatattt
cgcttcgttatgctgacgcacttggatttacgggggaaccggttgaaaattcttcctttt
actggtgttttagaacatattggtggtattatggagattcagcttgaagagaatccctgg
aattgcacttgtgatctgattccactgaaagcctggttggataccatatcggtctttgtc
ggggatattgtatgcgagacgccctttcgcctgcacggaaaagacgtcactcatttaatc
aagcaagacctttgtccccgaaggaatgtaggcgacccatctcaccgtggaatggaacct
tcctcggattcgcagtaccacatcccaattcctacattacgcgcacgcattactccaaca
agagcacctaaagcatcccgacctccaaaaatgagacatcgtcccacaccgcgagtgacg
tcaggtaaagataaacatgtgtttgggcctattatggtttatcagacgcgcgcccccgtg
ccaatgacttgcccgaacgtttgcatgtgcacatctcagaattccgacagtggactgaat
attaactgccaggaacggaagctacttaacatatcagacttacaacccacgccgtcctat
ccaaagaaactgcatttaactggcaattacttgcaggtcatatatccaacggatttgacg
gaatacagctcacttgaactcctgcatttgggaaataatcggctttccgttattatggag
ggggcctttgagaacctctccaatttacgaaggctctacttaaatggcaattacatcgag
agtctgtcccagtcacttttcgccggtctccagagcctacaatatctatacctggaatac
aatattatcaaagacatcttgccacaaacattcagtgcactacacaatctgcagttatta
ttcttgaataacaatttgttgagatcccttcccgatcatgttttcgcaggaacaatgctg
accaggcttaatcttagaaacaaccatttttcgcatttgccggtgcagggtgtactggac
cagctctctcctttcattcagattgacctccaggaaaacccctgggattgcacttgtgat
atcattgccctgaaaaactggatggagttatccagtacgagcgtggtggtaaatgagata
acttgcgactcgccttctaaacatgctggccgtttactccggtcactgcgaaatgatgca
atatgcagtgaaaccaacgaaatcatagctaccaagggacccggggatactgtttcgtcc
agcactgaagttaccgctcgctttattattaacgttacccctacgggcagtcatgtaccg
gaaatgcacgccgaggtgcccttgtctgtattgatattggggctgctggtggttttcatt
ctttccgtttgcttcggagccggcttgttcgtttttgcccttaaacgacgtaaaggaatt
gaaagcatccacacaaatgttaaccatttagatctgaactcttatcagatacagtacagc
tcgtacaacatagagacccgtggcgacaagatggacagtcatgattacacctacgttcct
cctgtgggtgagatgtgtcagaatccaatttacacacagaaagacagcaatcatgtgacg
tacaggaatttgaaaggcctctccttcagtacccttgagccaaaaaaggaagagctagca
cagagtccttcttttagtattagtacagttgactatcagtcatgtaacaacagagacccc
gaactctatcagaacattggggagagacttaaggagcttccgaccgctggacccctgaac
tacagcttcagcacgttacccaaaagatccgtagtgcagtcatacgactcagccaggcgg
aacaatcaggaccgttttgacaaaacagcactttatggaacagcgaggaaatatttggct
gcgcagcctaaaagcgaccaaacatggctacaagggaactttaaaacacagccggactac
cttgaggttcttgaaagacacactgttatgagtcagttgtaa
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