Clupea harengus (Atlantic herring): 105896372
Help
Entry
105896372 CDS
T09045
Name
(RefSeq) xylose isomerase-like
KO
K01805
xylose isomerase [EC:
5.3.1.5
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00040
Pentose and glucuronate interconversions
char00051
Fructose and mannose metabolism
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105896372
00051 Fructose and mannose metabolism
105896372
Enzymes [BR:
char01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.5 xylose isomerase
105896372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
105896372
NCBI-ProteinID:
XP_031432281
Ensembl:
ENSCHAG00000007137
UniProt:
A0A6P8G7T2
LinkDB
All DBs
Position
11:3556496..3562926
Genome browser
AA seq
438 aa
AA seq
DB search
MSTEYFRDISKIPYSPSAGAKDVLCFKHYNAGEVLHGRTMEDWLRFSVCYWHTFCGTGAD
PFGSPTLHRPWNEGGSAMETAKKRLHAAFEFFTKLGVKYYTFHDRDMSPEGSTLEESNRN
LDEMTDLALELQQQTGIRVLWVTCNLFAHPRYMNGASTNPDCHVLAYAAAQLKKGLDVAK
KLGAENFVFWGGREGFLSIYNTDVAAELKHMANFFKMAVAYKDKIGLKCQFLIEPKPKEP
CKHQYDYDAMSVIGFLKHYGLDQHFKLNIEPNHTTLAGHAYEHDIVMASVFDMLGSVDSN
TGSPDLGWDTDQFPMDIRNTTVVMKTVIEQGGLQPGGLNFDAKVRRESTDLVDLFIAHIG
AMDAFARGLRNAVRIIEEGFLDGMLKDRYLSFRAGIGQKVDEGRATLEELEDFIKQNGEP
SVTSGQQEKYESVFNHYL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagagtattttcgagatatttcaaagattccctattcgcccagcgctggtgcc
aaggacgtgttgtgctttaagcactacaatgcaggggaagtgttacatggaaggacgatg
gaggactggctgaggttctctgtgtgttactggcataccttctgtggaaccggtgccgat
ccgttcggatcccccacgctccatcggccttggaatgaagggggcagcgctatggaaacg
gcaaagaaaaggctccatgctgcttttgagttcttcaccaaacttggtgtgaagtattac
accttccatgacagggacatgtccccggagggctccaccctggaggagtccaaccgcaac
ctggacgagatgactgatctggccctggagctccagcagcagactgggattagagtgctg
tgggtcacctgcaacctgtttgcccacccccggtacatgaatggcgcctccacaaaccca
gactgccatgttttggcctatgcagcggcccagctgaagaaaggcctggatgtggcgaaa
aaattgggcgctgaaaactttgtattctggggaggcagagaaggtttcctgtcaatatac
aacactgatgtggctgctgagctgaagcatatggcgaactttttcaaaatggcagtcgca
tacaaagataagattggactgaagtgccagttcctcattgagccgaagcctaaggagcca
tgcaagcaccagtatgattacgatgcgatgagtgtgattggtttcctgaagcattacgga
ctggatcagcatttcaagctcaacatcgagcccaaccacaccacactggctggccatgct
tatgagcacgacatcgtcatggcctctgtgtttgacatgctggggtctgtagactccaac
acaggatcacctgatcttggatgggacactgaccagttccccatggacatcaggaacact
acagtagtaatgaagaccgtgattgagcagggtgggctacagccagggggcttgaacttt
gatgccaaagttcgacgggagtccacggacctggtggacctgtttattgcccatattgga
gccatggatgcttttgccagaggcttacgaaatgctgttaggattattgaagaaggattt
ctggatggcatgcttaaggatcgttaccttagtttcagggcggggattggacagaaagtg
gatgagggcagggccacgctggaagagcttgaggacttcattaaacaaaatggggaacca
agcgtcacatctggacagcaggagaaatatgagtctgtttttaatcattacctgtga
DBGET
integrated database retrieval system