Clupea harengus (Atlantic herring): 105896390
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Entry
105896390 CDS
T09045
Symbol
washc5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105896390 (washc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105896390 (washc5)
Membrane trafficking [BR:
char04131
]
Protein recycling
Others
WASH complex
105896390 (washc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
RSF
Motif
Other DBs
NCBI-GeneID:
105896390
NCBI-ProteinID:
XP_012678593
Ensembl:
ENSCHAG00000014583
UniProt:
A0A6P8GAD4
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All DBs
Position
11:4238023..4249681
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AA seq
1159 aa
AA seq
DB search
MVDFLAENNLCGQAILRIVSRGNAIIAELLRLSEFIPVVFRLKDKIDQQKYGDIICDFSY
FKGPEYYEAKLEAKPELQDLDEEFRENNIEILSRFYLAFESVHKYVVDLIRYLDDLNEGV
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGEVRERMLVSYYRYSAARSSAD
SNLDDICKLLRSTGYSSQPGAKRPANYPESYFHRVPIIPTFVSMVIGRLRSDDIYNQVSA
YPLPEHRSTALANQAAMLYVCLYFTPSILITQQAKMREIVDKYFPDNWVISIYMGITVNL
IEAWEPYKAAKTALNYTLDTANIREQASRYAASMDSLRPHVQQLLKEGFLREEIVLDNIP
KLLNCLRDCNVAIRWLMLHTAEAVYDPNNKRLRQIKEQVINDSKYSPKILFQLLLDTAQF
EFILKEMFKQMLTEKQMKWESYKREGSERMTELAEVFSGVKPLTRVEKNENLQAWFREIS
KQIESLNYEDSTAAGRKTVQLIQALVEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSYAWQLIDSFTAIMQESIRASPAMVTKLRATFLKLASALDLPLLRI
NQANSPDLLSVSQFYSGELVAYVRKVLQIIPESMFTSLAKIIKLQIHDIMEVPTRLDKDK
LKDYAQLGARYEVAKLTHAISVFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVRRVAY
SLHKGLIFNPKAKPSELMPKLKEMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINY
NVEQECNSFLRTKIQDWQSMYQSTHIPIPKYPPVDESATFIGRLCREILRITDPKVTCYI
DQMNTWYDLKTHQEVTNNRLFSEIQDTLGTFGLNGLDRLLCFMIVKELQNFLTVLQKSIL
RDKVVVDVFKAMLSAANPVKGIVANAGKVYPNAVAKTQKIWPAYLESIMKVGQMQILRQQ
IANELNYSCKFDSKHLAAALENLNNSLLADIEAHYQDPSLPYPKDDNTLLYEITSYLETA
GIHNPLNKIYITTKRLPYFPIVNFLFLIAHLPKLQYLKNQGMTCRKAADPVDWPPLVLGL
LTLLKQFHSRYTEQFLALIGQFIRSIMEQCTSQKIPDMPSDVVGALMFLEDYVRYTKLPR
KVAEAHVPSFIFDEFRTVM
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggtggactttctggcggagaataacttgtgcggccaggccatccttcggattgtgtcc
aggggaaatgctatcatcgccgagctgcttcgcctctccgagtttataccggtggtcttc
aggctcaaggacaaaatcgaccaacagaaatacggagacatcatatgcgacttcagctac
ttcaaaggaccagagtactatgaggcgaaactagaagcaaaaccagaacttcaagacctg
gatgaagaatttagggagaacaacattgaaattctgtcacggttttacctggcatttgaa
agtgtccataagtatgttgtcgacctgataagatacctagatgacctaaatgaaggcgtg
tatatccagcagaccctggagactgtactcctgaatgaagatggaaaacagctcttgtgc
gaggccttgtatctgtatggggtgatgcttctggtcatcgatcagaagattgagggagaa
gtcagagagaggatgctggtgtcgtattacagatacagcgctgcacgctcctcggcagac
tccaacttggacgacatctgcaagttactgcgcagcacgggctactccagccagcccgga
gccaagcggcccgctaactaccccgagagctacttccacagggtccccatcatccccacc
ttcgtcagcatggtgatcggacgactgcgctcagatgacatctacaaccaggtgtctgcc
tacccacttcctgaacaccgcagcaccgctctggccaatcaagcagccatgctctacgtc
tgcctgtacttcaccccgagcatcctgatcacacagcaggccaagatgagagagattgtc
gacaaatacttccctgacaactgggtaattagcatatacatggggatcactgttaacctt
atagaggcgtgggagccctacaaagcggccaagactgccctcaactacactttggacacg
gctaacatcagagaacaggctagccgatatgctgccagtatggacagcctgaggcctcac
gtgcagcagctgctaaaagagggttttctcagagaggagattgtcctagacaacatcccc
aagctgctcaactgcttgcgtgactgcaatgtcgccatccgttggctaatgctccatact
gcagaagcagtctatgatccaaataacaaaaggcttcgtcagataaaagagcaagtcatc
aacgactccaagtacagccccaagattctcttccagttgctgttggacactgcccagttt
gagttcattctgaaggagatgttcaagcaaatgctgactgagaagcagatgaagtgggag
agctacaagcgggagggctccgagaggatgaccgagctcgcagaggtcttctctggggtc
aagcccctcaccagggtggagaagaatgagaatctccaggcttggttcagagagatctcc
aaacagattgagtctctcaactatgaagactccacagctgctgggaggaagactgttcag
ctcattcaggccttagtagaggtgcaagagttccatcagctggagtccaaccttcaggtg
tgccagttcctggctgatacacgcaagttcctgcaccagatgatccgcaccatcaacatc
aaggaggaggtgctgatcaccatgcagatcgtgggggatctgtcatacgcctggcagcta
atagacagcttcacagcgataatgcaggagagcatcagagcgagtccagcgatggtgact
aaactgcgagcaactttcctcaagctggcctctgccctggacctgccactgttgcgtatc
aaccaggccaacagcccagatctgctcagcgtgtcccagttctactcgggggagctggtg
gcctacgtcaggaaggtcctgcagatcattccagaaagcatgttcacctccctggcaaag
atcatcaagctgcagatccatgacatcatggaggtgcccacgcgtctggacaaagacaag
ctaaaagactacgcccagctaggggcgcggtatgaggttgccaaactcacccacgccata
tctgtattcactgaggggattttgatgatgaagacaacactggttggcatcattaaggtt
gatcctaagcagcttctggaagatggtatcaggaaagaacttgtgaggcgtgtggcttat
tctctccacaaaggccttatcttcaaccccaaagccaagcccagtgagctgatgccgaag
ctgaaggagatggccgccaccatggacgggttctaccgctcgttcgagtacatccaggac
tacgttagcatctacgggctcaagatctggcaggaggaggtgtcccggatcatcaactac
aacgtggagcaggagtgcaacagcttcctcaggacaaagatccaagactggcagagtatg
taccagtcaacacacatcccaattcccaagtatccacctgtggatgagtctgccaccttc
attggacggctctgcagggagatcctccggataacagatcccaaagtgacctgttacatt
gaccagatgaacacgtggtacgacctgaaaactcaccaggaggtgaccaacaacaggctg
ttctctgagattcaagacacgctgggcacgttcgggttgaacggcctcgatcgactcctc
tgcttcatgatcgtgaaggagctacagaacttcctaacggtacttcagaagagtattctc
agggacaaggtggtggttgatgtgttcaaagcaatgctgagtgccgctaaccctgtcaaa
ggcattgtggccaacgcaggcaaagtctatcccaacgcggtggctaagactcagaagatc
tggccagcatatttggaatcaatcatgaaggtgggtcagatgcaaattctgcggcagcag
attgccaacgagctgaactactcctgcaagtttgactcgaagcatctcgccgctgctctg
gaaaacctcaacaactccctgttggctgacattgaggctcactaccaggacccctctctg
ccttaccccaaggatgacaacacgcttctgtacgagatcacctcttacctggagaccgct
gggattcacaatcctctcaacaaaatctacatcacaacgaagcgcttgccgtacttcccc
attgtgaacttcctcttcctcatcgctcacctacccaagctacagtacctcaaaaaccaa
ggaatgacgtgcaggaaggcagcagaccctgtcgactggcccccactggtgctcgggctg
ctgacgcttctgaagcagttccactccagatacacagagcagttcctggccctgattggc
cagttcatccgctccatcatggagcagtgcactagccagaagattccggacatgccttca
gatgtagtaggtgcgctgatgtttctggaagactacgtgcgctacacaaaactccctcgc
aaggtggctgaagcacatgttccaagcttcatttttgacgagttccggactgtgatgtga
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