Clupea harengus (Atlantic herring): 105896413
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Entry
105896413 CDS
T09045
Symbol
grin3bb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04020
Calcium signaling pathway
char04080
Neuroactive ligand-receptor interaction
char04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
105896413 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105896413 (grin3bb)
04082 Neuroactive ligand signaling
105896413 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105896413 (grin3bb)
Ion channels [BR:
char04040
]
Ligand-gated channels
Glutamate (ionotropic)
105896413 (grin3bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
105896413
NCBI-ProteinID:
XP_031430128
Ensembl:
ENSCHAG00000025468
UniProt:
A0A6P8FPN9
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All DBs
Position
10:28749662..28844401
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AA seq
997 aa
AA seq
DB search
MNLIFSNFLAYFYFGFQILHSFISPCQLHPQPCHILARIGHTVRLGALLPSRQPARVRAA
LNRALNGLAETGDNFLPYNLSLEVVPRESTDGDPESLFRCVCQSIVVQGVSAVLAFPQTQ
EEIVQVEFMSSFLEIPFISIIEHGEPLRTQNRFHLQMMTGVPPSGLAELLLSVLRRSGWQ
EGMAVLCQGWEDAGMLELLGPVGAPQWPGDSQWHLRASLDLSHVTQEEAEITNFLSEHLQ
QAEPPPASVLLFGSDPQCAASVLRSAQELGLTLPTVHWIMGYPLSPDMLHTIGLPLGLLA
YGEVDRKPLEFYIRDALELVTRAVAAATVVRPDLALIQNMVNCYDKPNKHELPSSGQYLA
RQLISEPRQPLHQAVLKARFLSNTSFTGLTGPVSVQRNASRVVTSQRVHVWSLRRDAVGQ
PTWVTVGSWERGRLEVEEQGLWQGSSPRQRAESQRGREGGRWRAGMPVTGSRIRVVTLVE
HPFIFTREVDEDGNCPAGQYCLDAGTNSTDMLDRYFKELSLGNRSFVPAEYSKCCYGYCI
DVLEKLAEDMHFEFDLYIVGDGKYGAWKGGRWTGLVGDLLSGVADMAVSSFSINSARSRV
IDFTSPFFSTSLGILVRSKDTAAPIGAFMWPLHWTMWVGIFVALHITALFLTLYEWNSPF
GMTPHGRNRVKVFSYSSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYT
ANLAAVMVGEKTFEELSGIHDAKLHHPSQGFRFGTVRESSAEDYMKKSFPEMHEYMRRFN
EPTTPNGVSNLKTDPPKLDAFIMDKALLDYEVSIDADCKMLTVGKPFAIEGYGIGLPQNS
PLTSNISEFISRYKSDGYMDMLHDKWYKVVPCGKRVFAVTETLQMGIRHFSGLFVLLCVG
VAGALLTLAGEHAFYRLVLPRIRRRQKFKYWLHTSQKIHRALNMTYEDVKKQRASTEKSC
NIQRSQPPQPPPAAPRKEPSPAGTTRAAAQPSRQPRR
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaatcttttccaatttcttggcatacttttacttcggattccaaattctccat
tccttcatcagcccgtgtcaactccatccccagccctgtcacatcctggcgcggatcgga
cacaccgtgcgcctgggtgccctcctgccgtccagacagccggccagggtgcgggctgcc
ctgaaccgcgccctcaacggactcgccgaaactggggacaactttcttccgtacaacctc
agcttggaagtggtgcctcgagaatcaacggacggagacccggagtccctgttcaggtgt
gtttgtcagtctatagtggtccagggggtctccgctgtgcttgccttcccccaaacccag
gaagaaatcgtgcaagtggaatttatgtcttctttcttggaaatcccttttataagcatc
atagaacacggagaaccgcttagaacacagaaccgcttccacctgcagatgatgaccggc
gtgcccccgtcgggcctggcggagctgctgctgtcggtgctgcggcggagcggctggcag
gagggcatggcggtgctgtgccagggctgggaggacgcgggcatgctggagctcctgggg
ccggttggcgccccccagtggcctggagactcccagtggcacctgcgtgcttctctggac
ctgtcgcacgtcacgcaggaggaagcggagatcaccaacttcctgtccgaacacctgcag
caggccgagccgccacccgcctcggtgctgctgttcgggtcggacccgcagtgtgccgcc
tcggttctgcgcagcgcccaggagctggggctcaccttgcccaccgtccactggatcatg
ggctacccgctgagccctgacatgctgcacaccatcgggctgcccctcggactgctggcc
tacggcgaggtggaccgtaagcccctcgagttctacatcagagacgccctggagctggtc
accagggccgtcgccgcggcaactgtggtgcggccagacttggcgctgatccagaacatg
gtgaactgctacgacaaacccaacaagcacgagctgccctcctcaggacagtacctggcc
cgccagctgattagtgagccccgccagcctctgcatcaggccgtgttgaaggccaggttc
ctgtccaacacgtccttcacgggtctgacggggccggtgagcgtgcagcggaacgcgtcc
cgcgtggtgacgtcccagcgcgtgcacgtgtggagcctgcgtcgcgacgccgtgggccag
cccacctgggtgacggtgggcagctgggagagaggccgcctggaggtggaggagcagggc
ctgtggcaggggtcgtcgccacggcaacgcgcggagagtcagcgcggtcgggaggggggc
cggtggagggcgggcatgcccgtgacgggcagccggatacgggtggtcacgctggtggag
caccccttcatcttcaccagggaggtggacgaggacgggaactgccccgctgggcagtac
tgcctggacgcgggcaccaacagcacggacatgttggaccgctacttcaaggagctgtcg
ctgggcaaccgcagcttcgtcccggcggagtatagcaagtgttgctatggctactgcatc
gacgtgctggagaagctggccgaggacatgcacttcgaattcgacctgtacatcgtgggc
gatggcaagtacggcgcgtggaagggcggccgctggacggggctggtgggcgacctgctg
agcggcgtggccgacatggccgtctcctccttcagcatcaactcagcccgcagccgcgtc
atcgacttcaccagccccttcttctccaccagcctgggcatcctggtgcgcagcaaggac
acggcagcgcccatcggcgccttcatgtggccgctgcactggaccatgtgggtgggcatc
ttcgtggcgctgcacatcaccgcgctcttcctcacgctgtacgagtggaatagccccttc
ggcatgacgccgcacgggcgcaaccgcgtcaaggtcttctcctactcctcggcgctcaac
ctgtgctacgccatcctgtttgggcgcaccgtctccagcaagacgcccaagtgctggacg
ggccgcttcctcatgaacctgtgggcaatcttctgtctcctggtgctgtccagctacacc
gccaacctcgccgccgtcatggtcggggagaagactttcgaggagctttcgggaatccac
gacgccaagctccaccacccgtctcaggggttccgctttggaaccgtgcgcgagagcagc
gctgaggactacatgaagaagagcttcccggagatgcacgagtacatgcgccgcttcaac
gagcccaccacaccaaacggggtctccaacctcaagacagatccccctaagttggacgca
ttcattatggacaaggccctactggactacgaggtgtccatcgacgccgactgcaaaatg
ctgacagtgggcaagcccttcgccatcgaaggttatgggatcgggctgccccagaactcc
cctctcacctccaacatctcagagttcatcagtcgctacaagtctgacggctacatggac
atgctgcacgacaagtggtacaaggtggtgccctgcggcaagagggtgttcgccgtcacc
gagactcttcagatgggcatccgtcacttctcagggctgtttgtgttgctgtgtgtgggt
gtggctggcgcgttgctaacgctagccggtgagcacgccttctaccgcctggtccttcca
cgcatccgccgccggcagaagttcaagtactggcttcacaccagccagaaaattcacaga
gcgttgaacatgacctatgaggatgtgaagaagcagcgtgccagcacagagaaaagctgt
aacatccagcgctctcagcccccccagcctcctcctgcagccccccgcaaggagccttcg
cccgctggaacaacgagagcagccgcgcagccaagcaggcagccgaggcgctag
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