KEGG   Clupea harengus (Atlantic herring): 105896445
Entry
105896445         CDS       T09045                                 
Symbol
elavl1b
Name
(RefSeq) ELAV-like protein 1b isoform X1
  KO
K13088  ELAV-like protein 1
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:char03019]
    105896445 (elavl1b)
   03041 Spliceosome [BR:char03041]
    105896445 (elavl1b)
Messenger RNA biogenesis [BR:char03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     105896445 (elavl1b)
   mRNA cycle factors
    Stress granule specific factors
     105896445 (elavl1b)
Spliceosome [BR:char03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    105896445 (elavl1b)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7 RBD_DEAH11
Other DBs
NCBI-GeneID: 105896445
NCBI-ProteinID: XP_012678654
Ensembl: ENSCHAG00000005636
UniProt: A0A6P3VQI8
LinkDB
Position
10:29300300..29306876
AA seq 383 aa
MAVRRGHIRYLKVCEVQSCQGADRDSQSHMKASFSPQEAYDNGYEDHMGDEPKDAKTNLI
VNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGNPYQRNQSHSLGYGFVNFVNPSDAE
RAISTLNGLRLQSKTIKVSYARPSSETIKDANLYISGLPKTMTQKDVEDMFMRFGRIINS
RVLVDQATDKCEYLTTPPSGLSRGVAFIRFDKRMEAEDAIKHLNGTKPPGATEPITVKFA
ANPNQARSSQLLSQLYHNQSRRFGGPVHHQAQRFRFSPMSVDHMSSVSGMNVSGNSTSGW
CIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIAS
LNGYRLGDKVLQVSFKTSKSQHK
NT seq 1152 nt   +upstreamnt  +downstreamnt
atggcagtcagaaggggacacatccgataccttaaagtgtgtgaagtgcagagctgtcag
ggtgccgacagagattcgcagtcacacatgaaagcttctttttccccccaggaggcgtat
gacaatgggtatgaggatcacatgggggacgagcccaaagatgccaagaccaacctaata
gtgaactacctgccgcagaacatgacgcaggacgagctgcgctccttgttcagcagcatc
ggcgaggtggagtctgccaaactcattagagataaagtggcaggtaatccttatcagaga
aaccagagccacagtttagggtacggatttgttaactttgttaaccctagtgatgcagaa
agggcaatcagtacactcaatgggctgagactacagtctaaaactatcaaggtctcctat
gctcgtccgagctccgagaccattaaagatgctaatctttacatcagcggcttgcccaag
accatgacccaaaaggacgtggaagacatgttcatgagatttggacgcatcatcaactcc
agagtacttgtcgaccaagccacagacaaatgtgagtatttgactactcctccgtcaggt
ctatctcgaggagtggccttcatccgtttcgacaagcgcatggaggcagaggatgccatc
aagcacctgaatggcacaaagccccctggcgccactgagccaatcacagtcaagtttgcg
gccaatcccaaccaggccaggagctcccaattactctctcagctctaccacaaccaatca
cgtcgcttcggtgggccagtgcaccaccaggcccagaggttcaggttttcccccatgagt
gtggaccacatgagtagcgtctctggcatgaacgtctccggtaactcaacctctggctgg
tgtatcttcatctataacctgggccaggacgcagatgaggggatcctctggcagatgttc
ggcccgttcggagccgtcaccaacgtcaaggtcatccgcgacttcaacaccaacaagtgc
aaaggcttcgggtttgttaccatgacaaactacgaggaggccgccatggcaattgccagc
ctcaacggttatcgcctaggagacaaggtcttgcaagtgtcttttaaaacaagcaagtct
cagcataagtag

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