Clupea harengus (Atlantic herring): 105896445
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Entry
105896445 CDS
T09045
Symbol
elavl1b
Name
(RefSeq) ELAV-like protein 1b isoform X1
KO
K13088
ELAV-like protein 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105896445 (elavl1b)
03041 Spliceosome [BR:
char03041
]
105896445 (elavl1b)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
105896445 (elavl1b)
mRNA cycle factors
Stress granule specific factors
105896445 (elavl1b)
Spliceosome [BR:
char03041
]
Common components
Common spliceosomal components
General mRNP proteins
105896445 (elavl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
105896445
NCBI-ProteinID:
XP_012678654
Ensembl:
ENSCHAG00000005636
UniProt:
A0A6P3VQI8
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All DBs
Position
10:29300300..29306876
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AA seq
383 aa
AA seq
DB search
MAVRRGHIRYLKVCEVQSCQGADRDSQSHMKASFSPQEAYDNGYEDHMGDEPKDAKTNLI
VNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGNPYQRNQSHSLGYGFVNFVNPSDAE
RAISTLNGLRLQSKTIKVSYARPSSETIKDANLYISGLPKTMTQKDVEDMFMRFGRIINS
RVLVDQATDKCEYLTTPPSGLSRGVAFIRFDKRMEAEDAIKHLNGTKPPGATEPITVKFA
ANPNQARSSQLLSQLYHNQSRRFGGPVHHQAQRFRFSPMSVDHMSSVSGMNVSGNSTSGW
CIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIAS
LNGYRLGDKVLQVSFKTSKSQHK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagaaggggacacatccgataccttaaagtgtgtgaagtgcagagctgtcag
ggtgccgacagagattcgcagtcacacatgaaagcttctttttccccccaggaggcgtat
gacaatgggtatgaggatcacatgggggacgagcccaaagatgccaagaccaacctaata
gtgaactacctgccgcagaacatgacgcaggacgagctgcgctccttgttcagcagcatc
ggcgaggtggagtctgccaaactcattagagataaagtggcaggtaatccttatcagaga
aaccagagccacagtttagggtacggatttgttaactttgttaaccctagtgatgcagaa
agggcaatcagtacactcaatgggctgagactacagtctaaaactatcaaggtctcctat
gctcgtccgagctccgagaccattaaagatgctaatctttacatcagcggcttgcccaag
accatgacccaaaaggacgtggaagacatgttcatgagatttggacgcatcatcaactcc
agagtacttgtcgaccaagccacagacaaatgtgagtatttgactactcctccgtcaggt
ctatctcgaggagtggccttcatccgtttcgacaagcgcatggaggcagaggatgccatc
aagcacctgaatggcacaaagccccctggcgccactgagccaatcacagtcaagtttgcg
gccaatcccaaccaggccaggagctcccaattactctctcagctctaccacaaccaatca
cgtcgcttcggtgggccagtgcaccaccaggcccagaggttcaggttttcccccatgagt
gtggaccacatgagtagcgtctctggcatgaacgtctccggtaactcaacctctggctgg
tgtatcttcatctataacctgggccaggacgcagatgaggggatcctctggcagatgttc
ggcccgttcggagccgtcaccaacgtcaaggtcatccgcgacttcaacaccaacaagtgc
aaaggcttcgggtttgttaccatgacaaactacgaggaggccgccatggcaattgccagc
ctcaacggttatcgcctaggagacaaggtcttgcaagtgtcttttaaaacaagcaagtct
cagcataagtag
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