KEGG   Clupea harengus (Atlantic herring): 105896537
Entry
105896537         CDS       T09045                                 
Name
(RefSeq) ATP-binding cassette sub-family C member 4
  KO
K05673  ATP-binding cassette, subfamily C (CFTR/MRP), member 4
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char02010  ABC transporters
char04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    105896537
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    105896537
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:char02000]
    105896537
Transporters [BR:char02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    105896537
SSDB
Motif
Pfam: ABC_tran ABC_membrane SMC_N AAA_21 AAA_29 AAA_16 MMR_HSR1 nSTAND1 AAA_22 RsgA_GTPase AAA_23 Dynamin_N DUF87 DUF815 DO-GTPase2
Other DBs
NCBI-GeneID: 105896537
NCBI-ProteinID: XP_031414006
Ensembl: ENSCHAG00000007230
UniProt: A0A6P8ENW4
LinkDB
Position
21:940343..975060
AA seq 1108 aa
MQLYGAFNSCENTVFREKSCITGQPTNVSVPHLPLCLSLLRSKTATLTDHRIRLMNEVVS
GIRIIKMYAWEKPFSALVDEVRRKEISKIMSSSYLRGLNMASFFSASKVILFITFTVHVL
LGNTISASRVFVTVSLYSAVRLTVTLFFPAAVEKLSESLVSIRRIKTFLLLDEIVKHNPT
LPETKTKESSVEIQDLVCYWDKSLDAPTLQRVSLTVKPGQLLAVIGPVGAGKSSLLSAIL
GELLPDKGVIKVHGELTYASQQPWVFPGTIRSNILFGKEMQKQKYERVLRACALKRDMEL
LPQGDLTIIGDRGATLSGGQKARVSLARTVYQDADVYLLDDPLSAVDAEVGRHLFEQCIC
GILKKSPRILVTHQLQYLEAADQILVLKEGHMVAKGTFLELQKSGLDFTSLLKSEEEDEL
TSALDTSQDSTLRSARSRTISQNSSRSQTSSMQSFQDISDSLPAEQVQTVAEESRSDGTI
GIRLYLKYLIAGANILLLLGIILLNILAQVSYILQDWWLAYWAAKQAELNVADTINGSIS
HINTTQELDLTFYLSIYAGLTGATLLFGFMRSLIMFNVLVRAAQTLHNRMFNSILRTPVR
FFDVNPIGRVLNRFSKDIGQLDSMLPWTFVDFIQVFLQIIGVIAVAASVIPWILIPVIPL
LIAFIFLRRYFLQTSRDVKRLESTTRSPVFSHLSSSLQGLWTIRAFKAAERFQLAFDAHQ
DLHSGAWFLFLTTSRWFAVRLDGICAIFVTITAFGSLLIQNNTEAGSVGLALSYAVTLMG
MFQWGVRQSAEVENMMTSVERVVEYTELENEAPWETEKRPPPSWPSKGQITFDQVNFSYY
PDGPVVLKNMTATFRPKEKVGIVGRTGAGKSSLISALFRLAEPKGKIVVDSLQISELGLH
DLRQKMSIIPQDPVLFTGTMRKNLDPFSQHSDQDLWSALEEVQLKAVVEELPGRLETVLA
ESGSNFSLGQRQLVCLARAILRRNRILIIDEATANVDHKTDELIQRTIREKFRECTVLTI
AHRLNTIIDSDRILVMNAGQIHECDTPYTLLQNPESMFFKMVQQTGKAEAAYLLQTAKQA
HLNKSQTSLSAPEGPNADGTLIIFETAL
NT seq 3327 nt   +upstreamnt  +downstreamnt
atgcagttatatggtgcgtttaatagttgtgaaaatacggtatttcgtgagaaatcctgc
atcaccggtcaaccaaccaatgtttctgtccctcatctacctctctgtctctctcttctc
aggagtaaaacagcaacactaactgaccacaggatccgtctaatgaatgaagtcgtttct
gggatccgaatcattaagatgtatgcctgggaaaagcctttctcagctcttgtcgacgaa
gtcagaaggaaagaaatctccaagataatgtccagctcttatctgcggggcctcaacatg
gcctctttcttctctgccagcaaggtcattttgtttataaccttcactgtgcatgtgttg
ctgggcaacactatctccgccagtcgtgtgtttgtgacggtgtccctctacagtgctgtg
cgcctcaccgtcacactcttcttcccggcggctgttgagaagctctcggagtctcttgtc
agcatccgcaggattaagacgttcctgttgcttgatgagattgtgaagcacaacccaacc
ctgcctgagacgaagacaaaagagagctccgtggagatacaggacctcgtgtgctactgg
gacaagagtctggacgccccgacgctgcagcgtgtgtccctcactgtgaagcctggccaa
ctcctggctgtcatcggaccagttggagcaggaaagtcctctctactcagtgccatctta
ggagagctgctgccagataaaggcgtgataaaggttcatggtgagctcacatatgcatcc
cagcagccctgggttttccccggaaccatccgcagcaacatcttgtttggcaaagagatg
cagaagcagaagtatgagagggtcttgagggcctgtgctttgaagagggacatggaactg
ctccctcagggtgacctcaccatcattggggacaggggggctaccctcagtggaggacag
aaggctcgtgtcagtctcgctaggactgtgtatcaggacgctgatgtctatttgctagat
gatcctctcagtgcggtggatgcagaagtcgggagacacctgtttgagcagtgtatctgt
ggtatactaaagaaaagtcctcgcatactggtcacccatcagctccagtaccttgaagca
gcagatcagatcctggttttgaaagagggtcacatggtggcaaaagggacctttttagag
ttgcagaagtcaggcctagactttacttccttgcttaagagtgaggaagaggacgagtta
acctcagcactggatacgtcacaagactccaccctgagatccgctcgcagccgaaccatc
tctcagaactcatcacgctcacagacatcctcaatgcagtcttttcaagatatatcagac
agtctgccggcggagcaggttcaaaccgtcgcagaagaatctcgctctgatggtacaatt
ggaatccgtctgtatttgaagtatctgatcgcaggagcaaatatcttgcttttgcttggc
attattctactcaatattcttgctcaggtatcatatattcttcaggactggtggctagcc
tactgggctgctaagcaggcagagctcaacgttgctgataccattaatggtagcatctcc
cacatcaacacaacacaagaactggatttaaccttttatctgagcatttatgcaggtctg
acgggtgctacactattgtttggtttcatgcggagtctgatcatgttcaacgtattggtg
cgtgcggctcagacactacataatcgcatgttcaactctattctgcgcacaccggtgcgc
ttctttgatgtcaacccaattggtagagtcttgaatcgattctccaaagatattggccaa
ctggattcgatgctaccatggacttttgtagatttcatccaggtgtttttgcaaattatt
ggagtgattgcagttgcggcctcagtgattccctggatccttatccctgtgatccctctg
ctgattgcattcatatttctccgtcgctacttccttcagacctctagagatgtgaaacga
cttgagtctaccactcggagtcctgtgttctcacacctgtcatcatcactgcaggggctc
tggaccatccgtgcctttaaagctgcggagcgctttcagctggcatttgatgcccatcag
gatctacactcaggggcctggttcctgttcctgaccacctcgcgttggtttgctgtgaga
ctggatggcatctgcgctatatttgtcacaatcactgcgtttgggagcttattgatccaa
aacaatacagaggctgggtctgtgggcttggctctctcctatgctgtcacactgatgggc
atgttccagtggggcgtccggcagagcgccgaagtggagaacatgatgacctcagtggag
agggttgtggagtatactgaactggagaatgaagcaccgtgggaaacagaaaagcgccct
cccccttcctggccatccaaagggcaaatcacatttgaccaggtcaacttctcgtactac
cctgatggacccgtcgttctgaagaacatgacggctaccttcaggcccaaagaaaaggtg
ggaatcgttgggaggaccggtgcaggaaagagctctttaatatccgcactcttccggctg
gcggaacccaaggggaagatcgtggtggattctttacagatctctgagttagggctgcat
gacctgaggcagaagatgtccattattcctcaggaccccgtgctcttcactggaaccatg
aggaagaacctggaccctttcagtcagcattcggaccaggacctgtggagtgctctagag
gaggtccaactgaaggcggtggtagaagaattaccagggcggctggagacggtgctggcc
gagtctggttcaaacttcagcctgggccagaggcagctggtgtgtctggcacgtgctatc
ctccgcaggaaccgcatcctcattatcgacgaggccactgccaacgttgaccacaagaca
gatgaactgatccagcgaaccatccgagagaagttccgagagtgtactgtgctcaccatc
gcccacaggctgaacaccatcattgacagtgaccgcatcctggtcatgaatgcaggccaa
atccatgaatgcgatacgccctacaccctcctgcagaacccagagagtatgttcttcaag
atggttcagcagacggggaaggcagaggcagcctatctgctgcaaacagccaaacaggca
cacctgaacaagagtcagaccagtctgagcgcacctgaaggacctaatgcagatgggact
ctgatcatctttgaaacagcgctgtaa

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