Clupea harengus (Atlantic herring): 105896574 Help Entry 105896574         CDS       T09045                                  Symbol aqr Name (RefSeq) RNA helicase aquarius isoform X1   KO K12874   intron-binding protein aquarius Organism char  Clupea harengus (Atlantic herring) Pathway char03040   Spliceosome Brite KEGG Orthology (KO) [BR:char00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     105896574 (aqr)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:char03041]     105896574 (aqr) Spliceosome [BR:char03041]  Complex B   Other components    Prp19-related factors     105896574 (aqr)  Complex C     105896574 (aqr) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Aquarius_N_1st Aquarius_N_2nd AAA_11 AAA_12 Aquarius_N_3rd AAA_19 ResIII AAA_30 UvrD-helicase UvrD_C_2 DEAD SLFN-g3_helicase AAA_16 Parvo_NS1 AAA DnaB_C PhoH NB-ARC AAA_22 nSTAND3 ATPase LPD34 Motif Other DBs NCBI-GeneID:  105896574 NCBI-ProteinID:  XP_031435662 Ensembl:  ENSCHAG00000002988 UniProt:  A0A6P8G877 LinkDB All DBs Position 14:complement(20671211..20744629) Genome browser AA seq 1484 aa AA seqDB search MEKDSRVKKIAAPSVSQINAEYVTQLANKYWAPLVKKKLPFDRKVIEDIYENEIHKSKFA IRKIMLLEFSQYLENYLWVNYTPQVSSNAYLMSICCIVNEKFRENVPAWEVFKKEPRHFP FFVQCVMEASLAGKEKGLSLREQTVLLLFLDHCFNSLEVDLIREQVQQLISLPMWMGLLP SRLQQEMKKVPKLKKFWNLIKKNYEKLEPKAAEQAKMERTFLSDLINKFLQVLGSIPASG TVSMEAVHYCERFIELMIDLEALLPTRRWFNTVLDDSHLVVSCHLSSLSQREKEGHLFCQ LLDMLKFYTGFEINDQTGNALTEKEMTTLHYDRITSLQRSAFAHFPELQDFALSNVAAVD TRESLNKKFGNLSPDTLHRVASYLCLLPELPEGKSTTYDKEVLLELLVSRHERRISQIEQ LNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYE IRQDIEDVVSRMKPWQSEYGGVVFGGWARMAQTIMAFSIVEVAKPNIGEGWPARVRADIT VNLNVRDHIKSEWEGLRKHDVCFLVTVRPMLPYGTRFDRRQPFVDQVGLVYVRGCEVQGM LDDKGRVIEEGPDPKPKLRGDSRTFRVWLDPNQYQQDMTHSIQTGVEDPYETFNIIMRRK PKENNFKAVLETIRNLMNTECVVPDWLHDIILGYGDPGSAHYSKMPNQIPSLDFNDTFLT LDHLKACFPGYQVKVTVDDPALQVPPFRITFPESKTSQQAKGKKRKADHDEHKEEEGKKE EDCTLVVEPHVIPNRGPYPYNQPKRNTIPFTPTQIEAIRAGMQPGLTMVVGPPGTGKTDV AVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRMGHGEEELETEKDF SRYGRVNYVLARRLELLREVGRLQESLDVPGDVSYTCETAGHFFLYQVISRWEEYMSKVR PKGGRPVSVEAVSSHFPFPKYFQNAPQPLFHGNSYEEDMDIAEGCFRHIKKIFTQLEEFR AFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIET FIPLLLQNPEDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRLGVPTVD LDAQGRARASLCNLYNWRYKQLGNLPHVQQQHEFQMPNPGLTYDFQLVNVEDFNGVGETE PNPYFYQNLAEAEYAVALFMYMRVLGYPADRISILTTYNGQKHLIRDVVNQRCARNPFFG QPNKVTTVDRFQGQQNDYIILSLVRTKAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQN CFELTPAFNQLTARPMQLHIRTNEYYTQPIGDRSSQPNQAIKNMPEMANLVYNMYMHMMQ QSQQQRQQQQLLPPPRQVREATVEPEAEPEPEADAAAETEAPAKAQEGADPEGQEPMEEE PSATAIQSAAPKPVQAEPQEEAHPKMPEHPGRDSDSEYSEEDEA NT seq 4455 nt NT seq  +upstreamnt  +downstreamnt atggagaaagactctcgtgtgaagaaaatagctgcaccttctgtgtcccaaatcaacgct gaatatgttacacagctggcaaacaaatattgggcaccccttgttaagaaaaagcttccc ttcgaccgcaaggtaatagaggacatatatgagaatgagattcataaatcaaagtttgct ataaggaaaatcatgttgctggaatttagtcagtacctggagaattacctctgggtgaac tacacacctcaagtgtccagcaacgcctatctcatgtccatctgctgcatcgtcaatgag aagtttcgtgagaacgtaccggcatgggaggtgtttaagaaagagcccaggcacttcccc ttcttcgtccagtgtgtgatggaggcctcgttagctgggaaggagaagggcttgtcttta cgggaacagactgtactcctgctcttcctcgatcactgtttcaacagcctggaggtggat ctgattcgtgagcaggtgcagcagctcatatctctgcccatgtggatgggcctgctaccg tctagactgcagcaagagatgaagaaagttccgaagctgaagaagttctggaacctcatc aaaaagaattacgagaagcttgagccaaaggctgctgagcaagccaaaatggagagaacg ttcctgtctgacctcatcaacaaattcctccaggttctgggatccattcctgcatcaggg accgtttccatggaggccgtgcattactgtgaacgattcatcgagctcatgattgacctg gaggctctcctccccactcgccgctggtttaacacagtcctggacgactctcacctggtg gtgagctgccacctgtccagtctgagtcagagggagaaagagggacacctcttctgtcag ctacttgacatgctgaagttctacaccggctttgagataaatgatcagacgggcaacgct ctcacagagaaggagatgacaacccttcactacgacaggatcacgtctctgcagagatcg gctttcgcccacttccctgagcttcaggactttgccctgtccaatgtggctgcagtggac acacgagagtccctcaacaagaagttcggcaacctcagtcccgacactctccaccgggtg gcgtcgtacctgtgtctgctcccagagttgccagaggggaaaagcaccacctacgacaag gaggtcctgctggagcttctggtgtcacgccatgagcggaggatctcccaaatcgagcag ctgaaccagatgcccctgtacccgacggagaagattatctgggatgagaacatcgtaccc actgagtactactctggtgaaggttgtctagctctgccgaagctgaacctgcagttcctg acactgcatgactacctgctgaggaacttcaacctgttccgcctggagtccacctacgag atcaggcaggacattgaggatgtggtgtccagaatgaagccatggcagtctgaatatggt ggtgtggtgtttggcggttgggctcgtatggctcagaccatcatggccttctccatcgtg gaggtggccaagcccaacatcggcgagggctggccagcacgtgtccgcgccgacatcacc gtcaacctcaatgtgcgcgatcatatcaagtcagagtgggagggcctgcgtaaacatgac gtgtgtttcctggtcaccgttcgacccatgttgccgtacggcacacgcttcgaccggcgc cagccctttgtggaccaggtgggcctggtgtacgtacgcggctgcgaggtgcaaggcatg ctggacgataagggccgtgtcatcgaggaaggtccggacccgaagcccaagctgagggga gactccagaaccttccgggtttggctggacccaaaccagtaccagcaggacatgacccac agcatccagactggagtggaggatccgtacgagaccttcaacatcatcatgcgccgcaag ccaaaggagaacaacttcaaggctgtgcttgagaccatccgaaacctgatgaacacagag tgcgtcgtccccgactggctccacgacatcatccttggttacggcgacccgggcagcgcc cactactccaagatgcccaatcagatcccgtcactggacttcaacgacaccttcctgacc ctagaccacctcaaagcctgtttccctggataccaggtcaaggtcacagtggacgaccca gctctccaggttccacccttcagaatcacattcccagaaagcaagacttcacagcaagct aaagggaagaaaagaaaggccgatcatgatgagcataaagaggaggaggggaagaaggag gaagattgcacgctggtggtagaacctcatgttatccctaatcgtgggccatacccctac aaccagccaaaacgaaacaccatccccttcacgccaacgcagatcgaggccatccgagcc ggcatgcagcctggactcaccatggttgttggtcctcctggtacgggtaagactgacgtc gccgtgcagatcatctccaacatctaccacaacttccccgagcagaggaccctcattgta acccactccaatcaggctctgaaccagctgtttgagaagatcatggccctggacatcgat gagcgccacctcctgcgtatgggtcacggagaggaagagctagaaactgagaaggatttc agcagatatgggcgtgtgaactacgtgttggcgcggcgcctggagctgctgagagaggtg ggtcgtctgcaggagagtttagatgtgccgggagacgtgagctacacctgtgagaccgct ggacacttcttcctctaccaggtgatctctcgctgggaggagtacatgagtaaggtgagg cctaaaggagggcgtccggtgagtgtggaggccgtgtccagccacttccccttccccaag tacttccagaacgctccacagcccctcttccatggcaactcctatgaggaggacatggac attgctgagggctgcttcaggcacatcaagaagatcttcacacagctggaggagttccgg gcctttgagcttctgcgtagcgggttggaccggtccaaatacctgctggtgaaggaggcc aagatcatcgccatgacctgcacacacgctgcactcaagcgccacgacctggtggagctg gggttcaagtatgataacatcctgatggaggaggctgctcagatcctggagattgagacc ttcattccgctcctcctgcagaaccctgaggacggcttcagtcgtctgaagcgctggatc atgattggggaccaccaccagttgcccccggtcattaagaacatggcctttcagaagtac tccaacatggagcagtcgctcttcacccgcttcgtcaggctgggcgtgcccaccgtcgac ctggatgcccagggacgagcccgtgccagtctgtgcaacctgtacaactggcgctacaag caactgggcaacctgccccacgtgcagcagcagcatgagttccagatgcccaacccgggc ctcacctacgacttccagctggtcaatgtggaggacttcaacggcgtgggagagaccgaa cccaacccctacttctaccagaacctggcggaggcggagtacgcggtggcgctcttcatg tacatgcgggtcctgggttacccggccgaccgcatcagcatcctcaccacctacaacggc cagaagcatctcatccgagatgtggtcaaccagcgctgcgccaggaaccccttcttcggc cagcccaacaaggtgacaacagtggaccgcttccagggtcagcagaatgactacatcatc ctctcactggtgcgcaccaaagctgtgggacacttgagggatgtgcggcgtctggtggtg gccatgtctcgagctcgtctgggtctctacatcttcgcccgcgtgtctctgttccagaac tgctttgagctcacgccagcctttaaccagctcaccgcgcgccctatgcagctacacata cggactaatgagtactacacccagcctattggagatcgctcgtcccagcccaaccaggcg atcaagaacatgccggaaatggccaacctggtgtacaacatgtacatgcacatgatgcag cagagccaacagcaaagacagcagcagcagttgctccctcctcctcgtcaggtgcgggag gcaacagtagagccggaggccgagcctgagccagaggcagacgcagctgcagagactgag gctcccgccaaggcccaggaaggggcggaccctgagggccaggaaccaatggaggaagag cccagcgccacagccatccaatcagcagcccccaagcccgtccaggctgaaccccaagag gaggcacaccccaagatgcctgagcaccccggtcgagacagtgacagcgagtacagtgaa gaggacgaggcgtag

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