Clupea harengus (Atlantic herring): 105896641
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Entry
105896641 CDS
T09045
Symbol
sucla2
Name
(RefSeq) succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00020
Citrate cycle (TCA cycle)
char00640
Propanoate metabolism
char01100
Metabolic pathways
char01200
Carbon metabolism
Module
char_M00009
Citrate cycle (TCA cycle, Krebs cycle)
char_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
105896641 (sucla2)
00640 Propanoate metabolism
105896641 (sucla2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105896641 (sucla2)
Enzymes [BR:
char01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
105896641 (sucla2)
6.2.1.5 succinate---CoA ligase (ADP-forming)
105896641 (sucla2)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105896641 (sucla2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
DUF3201
Motif
Other DBs
NCBI-GeneID:
105896641
NCBI-ProteinID:
XP_012678878
Ensembl:
ENSCHAG00000008208
UniProt:
A0A6P3VQX3
LinkDB
All DBs
Position
21:complement(8219497..8230952)
Genome browser
AA seq
466 aa
AA seq
DB search
MATSLICGRLSAGLRNSGSRTTLSSATKVLAGATGLFGGHGSQQPPLAMQQQQRHLSLHE
YMSIGLLKEAGICVPEGMVATTSEEAYSVAKQIGSKDLVVKAQVLAGGRGKGTFEGGLKG
GVRIVYSPEEARDISSQMIGKKLYTKQTGEAGRICNQVFICERRYPRREYYFAITMERSF
QGPVLIGSSQGGVNIEDVAAENPDAIVKEPIDIMEGIKKEQAVRLAEKMGFPKALINDAS
ESIIKLYNVFIQYDASMLEINPMVEDSDGQVMCMDAKLNFDSNAAYRQKKVFDMQDWSQE
DPRDRQAAKADLNYIGLDGTIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATAHQV
TEAFKLITSDKKVQAIMVNIFGGIMRCDVIAQGIIMAVTDLELKIPIVVRLQGTRVDDAK
ALIAASPLKILACDDLDEAAKMVVKLSEIVSLAKQAQVDITFQLPI
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccctgatttgtggccggttgtccgctggacttaggaattccgggtccagg
acaactttaagctcagcaactaaggtcctcgctggtgccaccggtctgttcggcggacat
ggctcccagcagcctcccctggctatgcaacagcagcagaggcacctgtcgctgcatgag
tacatgagcatcgggctgctgaaggaagctggcatatgcgtgcccgaaggcatggtggcc
accacatctgaagaggcctactctgttgccaagcagattggttctaaggacctggtggtg
aaggcgcaggtgctggctggaggcagagggaaaggcacatttgaggggggtctgaaggga
ggagtgaggattgtttactcgcctgaagaggcccgtgacatctcctctcagatgattgga
aagaagctctacaccaaacagactggggaggcgggccgcatctgcaaccaggtgttcatc
tgtgagcgccgctacccccgtcgggagtactacttcgccatcaccatggagaggtccttc
cagggcccagtgctaattggcagctctcagggaggtgtgaacatcgaggacgtggcagca
gagaacccggacgccattgtcaaggagccaatcgacatcatggagggcataaagaaggag
caggctgtcaggctggctgagaagatgggctttccaaaagctttgattaatgatgcatca
gagagtatcattaaactctacaatgtctttatccaatacgacgcctccatgttggagatc
aacccaatggtggaggactccgatggccaggtgatgtgcatggatgctaagctcaacttt
gactcgaatgcggcataccgacagaagaaggtgttcgacatgcaggactggtctcaggag
gacccacgtgaccggcaggcggccaaggccgacctcaactacattggcctagatggcacc
attggctgcctggttaacggagctggtttggctatggccaccatggatatcatcaagctc
catggcggcaccccggccaacttcctggatgtggggggtggagccacggcgcaccaggtg
acagaagccttcaagctcatcacttccgacaaaaaggtccaggctatcatggtgaacatc
tttggaggcatcatgaggtgtgatgtcattgctcagggcatcatcatggctgtcacagac
ctggaactgaagatccccatcgtggtgcggttacaagggacgagagtggatgatgcaaaa
gctctgattgctgccagccctctgaagatcctggcctgtgatgatctggacgaggctgca
aagatggttgttaagctttctgaaatcgtatcgttggccaagcaggcccaggtggacatc
acgttccagctgcccatctaa
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