Clupea harengus (Atlantic herring): 105896659
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Entry
105896659 CDS
T09045
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105896659 (gtf3c3)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
105896659 (gtf3c3)
TFIIIC, fungi type
105896659 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_16
TPR_1
TPR_14
TPR_19
TPR_17
TPR_CcmH_CycH
TPR_7
TPR_11
TPR_12
ANAPC3
TPR_20
TPR_9
TPR_15
TPR_EMC2
ARM_TT21_C
TPR_4
ChAPs
DNA_pol_phi
Vps39_1
Motif
Other DBs
NCBI-GeneID:
105896659
NCBI-ProteinID:
XP_012678907
Ensembl:
ENSCHAG00000019562
UniProt:
A0A6P3VQY8
LinkDB
All DBs
Position
21:complement(8912780..8925219)
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AA seq
928 aa
AA seq
DB search
MMSEFSPELIDYLDGRISFEEFEKRRAERKAKEKESKKGSQEFGSGEDATCEDGEDASPS
TSRAARKTRRQRTGETEEGISPSVHQAFASMLGEGGEEEDEENDDDDDDDDEDDDLNKDK
DDNEGEVEGEEDAENEGITAGDVFALEMELNRENKKMMKEKRTRSKLPRALRGLMGEANI
RYARGDKEDAILMCMEIIRQAPLAYEPFSTMAMIYEDQGDMEKALQFGLIAAHLNPSDCE
EWVKLADMSLEQDNIKQAIICYSKAIKYDPTNVRFLWERSSLYEQVGEHKQAMDGYRRIL
NLLPPHDGEHFMQLSRDMAKSYYESSELMSAIGVMEEALKRHPELVSPECINMAAELYIA
NHQHNKALQALVKFCKIELKKEEPKTEPVEQQVENEEKMDEGEEKEEEKEKEEEEKEIEE
PLGVVLEVIVPDEVPVDIRVKLMVCFIHQHVYKPLDPMLTSLMEQSPEELGDLYLDVAEA
FLDEGQYNSALPLLSALVCSERYNLAVVWLRHAECLKALGHMDVAVRSYRKVVEMAPLHL
EARLSLSTLQQQLGRPERALEALESMYDPETLAQDSSAAQQELKLLLHRSTLLLSQGKQA
DYLDTLLTMLAMLLKMAMIRARVCLISDSGHLHLTRASGRKVTDVADQETAYQDIVGKTS
VLSREDWWQLLLRCVNILCDCQRFGEAELMVDTSLQYDTFYDERVKRKELGYLGLSTAFL
DRNFCKAYNYIRLMLMDSVERTQLWNVFNQVTLHSQDVRHHRFCLRLMLKNPENLALCVL
NGHASLVSGSFKHALGQYVQAFRMQPDHPLHSLCVGLTFFHMASQKFVIKRHSLVMQGFS
FLWRYVERRGHCQESMYNLGRALHQLGLMHLAIHYYQKALSLPPPSLEGIDDDQVDLRRE
IAYNMSLIYQSSGNIEMARHLLYTHCTV
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggaatttagccctgaacttattgattatttagacggaaggatctcattcgag
gaatttgagaaaagaagagctgagcggaaagcgaaggagaaggaaagcaaaaaggggagt
caggagttcggctccggtgaagatgcaacatgcgaggatggagaggatgcttcaccgagc
acatcgcgcgctgctcgaaaaacacggagacaacgcaccggtgagacagaagaggggata
agtccctctgtacaccaggcctttgcctccatgcttggtgaagggggtgaagaagaggac
gaggagaacgatgatgatgatgatgacgacgatgaagacgatgacttaaacaaagataag
gacgataacgaaggggaggtagaaggggaggaggatgctgagaacgagggcatcacggca
ggggacgtgtttgctctggagatggaactcaatcgtgagaataagaaaatgatgaaggag
aagcgcactcggagcaaactgccgcgggcccttagaggactcatgggcgaggccaacatc
cgctatgcccgtggggacaaggaagatgccatcctaatgtgcatggagatcattcggcaa
gctcccctggcctacgagcccttctccaccatggctatgatctatgaggaccagggggac
atggagaaggcccttcagtttggcctgatcgccgcgcacctcaaccccagcgattgtgag
gagtgggtcaagttagctgacatgtccttggagcaggacaacatcaagcaagccatcatc
tgctactctaaagccatcaagtacgacccgacgaacgtgcgtttcctgtgggagcgctcc
agcctgtatgagcaggtgggcgagcacaagcaggccatggatggctaccgccgcatcctc
aacctgctgcctccccacgacggagagcacttcatgcagctgtcacgggacatggccaag
agctactacgagagcagtgagctgatgtctgccattggcgtgatggaggaggcgctgaag
cgccacccggagctggtctctcccgagtgcatcaacatggccgccgagctctacatcgcc
aaccaccagcacaacaaagccctgcaggcgttggtgaagttctgtaagattgagctgaag
aaagaggagccgaagaccgagccagtggagcagcaagtagaaaatgaggaaaagatggat
gagggggaggagaaagaagaggagaaggagaaagaggaagaagaaaaagagatcgaagaa
ccacttggagtggtgttggaggtcattgtcccagacgaagtgcctgtagacatcagagtg
aagttaatggtgtgctttatacatcagcatgtgtacaagcctctggatcccatgttgacc
tctctgatggagcagagccctgaggagctgggggatctgtatctggacgtggcggaggcc
ttcctggacgagggccagtacaactcagctctcccgctgctttcggcgctcgtctgctcc
gagaggtacaacctggccgtggtgtggctcaggcatgcagagtgtcttaaagctctggga
cacatggatgtggccgtgaggagctacaggaaggtggtggagatggctcctctgcacctg
gaggcgcgcctctccctctccaccctgcagcagcagctgggccggcctgagcgcgccctc
gaggccctggagtccatgtacgaccccgaaacactcgcccaagactccagcgctgctcaa
caggaactgaagttgctgctacatcgctccacacttctcctctcccagggcaaacaggct
gactacttagacactcttttgaccatgctggccatgctactgaagatggccatgatacgc
gccagggtgtgtttgatctctgattctggtcacctgcacctgaccagagcctctgggcgt
aaggtgactgacgtcgctgaccaggagacagcctatcaggacatcgtaggaaagaccagt
gtgttgtcacgggaggactggtggcaactgctgctgcgctgtgtgaacatcctctgtgac
tgccagcgcttcggcgaggctgagctcatggtggacacctcgctgcagtacgacaccttc
tacgatgaacgggtcaagcgcaaggagctgggctacctgggcctgtccaccgccttcctg
gaccgcaacttctgcaaggcctacaactacatcaggctgatgctgatggactccgtcgag
cggacgcagctgtggaacgtgttcaaccaggtgacgctgcactcgcaggatgtgcgccac
caccgcttctgcctgcgcctcatgctcaagaaccctgagaacctagcgctatgtgtgctc
aacggccatgcctcgctcgtctccggcagcttcaagcacgcccttggccagtatgttcag
gccttccgtatgcagccggatcacccactccacagcctgtgtgtgggcctcaccttcttc
cacatggcctcacagaagtttgtcatcaagcgccactctctggtcatgcagggtttctca
ttcctctggcgctatgtggagcgccggggccactgccaggagagcatgtacaacttgggc
cgcgcgctgcaccagctggggctcatgcacctggccattcactactaccagaaagccctg
agcctccccccgccctctctggagggaattgatgatgaccaggtggatctacgcagagag
attgcctataacatgtcactcatctatcagtccagtggtaacattgaaatggccaggcac
ttgttatacacccactgcactgtctag
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