Clupea harengus (Atlantic herring): 105896697
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Entry
105896697 CDS
T09045
Symbol
ptprz1b
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105896697 (ptprz1b)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
char00535
]
105896697 (ptprz1b)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
105896697 (ptprz1b)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
105896697 (ptprz1b)
Proteoglycans [BR:
char00535
]
Cell surface proteoglycans
Others
105896697 (ptprz1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
Tc-R-P
PTP-SAK
DSPc
PTP-NADK
PTPlike_phytase
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
105896697
NCBI-ProteinID:
XP_031438529
Ensembl:
ENSCHAG00000010584
UniProt:
A0A6P8GH73
LinkDB
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Position
16:complement(15031984..15071611)
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AA seq
1355 aa
AA seq
DB search
MHQIATEARAPALPMRIVAHPPFTHLSYYAVGAYFRGQRKFSEDVDWSYTGTLNQQNWPK
KYPSCNTARQSPIDIDEDFAQVKLEFQNLQTEGWEQKTPATTTIKNDGKTVALNLNGEYY
ISGGGLRSRFRVGRITFHWGRCNATSDGSEHSLNGVKFPLEMQIYCHEADKYQSIDDALR
EGGRITALAVLFEVSPRDNENYANIIDGVNAVSRFGKSSTVEPFSILGLLPNSTEKYYIY
NGSLTTPPCSEPVEWLVFKNTVSLSESQLEVFCEVMTMQQAGYVMLMDYQQNNFRQQQEP
FMGQVFSSYTGTEELQEPICSSEPENIQADPQNYTGIVVTWERPRAVYDTTIVRYSVTYQ
RLQGKDPPKREYLTDGDQDVGAIIYKLLANSSYVVQVVALCNNGLKGRMSDQVVVDMPLE
DLEGDPEPFTDSPDSEDYFEVTPSTGRGRPDLESPPDRVLTSDSSSSKSSIWVTLATDQP
GFLFPGVKGSAAPVRRRITEESSLSWTPGRDKAETYTRKPLTKLLTPEGVKPPDGVVVTD
IYFEDFLNNSLYETTTSVGMPSPDEEIVGMVTLPRERVYVSPKDNEVRRPDDLYLPGAVT
NPLPETPVISSTQQPEMVTTTTSVPATSTAAAGTQTTTNALLYTTQPMFNEASNSSPESR
VGMVGGVEREKRTVVPLAVVSTLTILCLLVLVGILIYWRKCFQTAHFFVEDNTSPRVFSA
PSTPLLLPTGTEENEALPVKDFVKHVAELHTTHTFSKEFEILKESYEEIQSCTVDMGMTT
DSSNHPDNKGKNRYINILAYDHSRVKLAPNLDKEGECGDYINANYVDAFNHPKAFIAAQG
PMKASLEDFWRMVWEQNVGVIVMITNLVEKGRRKCDQYWPMDNQEEYGCFLVTLKSTKAL
AYYTQRTFTLRNISIKRGSQKGRSQERIVRQYHYTQWPDMGVPDYTLPVLSFVQKSSRAR
TADMGPVVVHCSAGVGRTGTYIVLDSMLRQIKEQGTVNIMGFLKHIRTQRNFLVQTEEQY
VFIHDALVEAILSKETEVSSSRIHAYVSDLLTPGPSGKTRLEKQFKLVSQTNVKQCDYTS
ALKEGNVEKNRTSSLMPVERSRVCLSTTPGESSDYMNASYVMGYRQSCEFIITQHPLPCT
IRDFWRMIWDHNSQIIVSLPDIHGQVEEDECVYWPIKDQPINCETFTVTFTGEDNVCLPN
EELLVVHDFLLEATQDDYVLEVRQYRTPRWPNPDSPMSNTFELINIIREDTRHREGTIVV
HDRYGGSTAGMFCAVTTLADQVEEENCVDVYQTARMTNLMRPGVFTDMEQYQFLFKAILS
LVSTKEDEKTLRSSENNGTIPTGSANATESLESLM
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaatagcaactgaggcgcgcgctccagctcttcccatgagaattgtcgcccat
cccccattcacccatctgtcctactatgcggtgggcgcatacttcagaggccagcgcaag
ttctccgaggacgtcgactggtcatacacaggaactctaaaccagcagaactggcccaaa
aagtacccctcctgcaacacagcgaggcagtcgcccatcgacatcgatgaggacttcgcc
caggtcaagctggagtttcagaacctgcagacagagggctgggagcagaagacgccggcc
actacgaccatcaagaacgacgggaaaaccgtggccctgaacctgaatggagaatactat
atcagcggcggcgggctgcgctccaggtttcgggtgggcagaatcacattccactggggc
cgctgcaacgccacttcagatggatctgagcacagtctcaatggtgttaagttcccactt
gagatgcagatctactgccatgaggcagacaagtaccagtccatcgatgatgcgctgaga
gagggaggaaggataacagcgctggctgtgctctttgaggtcagcccgagagacaacgaa
aactacgccaacatcatcgatggagtcaacgccgtcagccgcttcggtaaaagcagcacg
gtggagccgttctccatcctgggccttctgcccaactccacggagaagtactacatctac
aacggctccctgacaacgccgccctgctcggagcccgtggagtggcttgtttttaaaaac
acagtctcgctctctgagagccagctggaggtattctgtgaggtgatgactatgcagcag
gccggctacgtgatgctgatggactaccagcagaacaatttccggcagcagcaggagccg
ttcatgggccaggtgttctcctcctacaccggaaccgaggagctgcaggagcccatttgc
agttcggagcctgagaacatccaggcggacccccagaactacacgggcatcgtggtgacg
tgggagaggccccgcgcggtctatgacaccaccatcgtacgctactccgtcacctatcag
aggctgcagggcaaagacccacccaagcgcgagtacctgacagatggagaccaggatgtg
ggggcaatcatctacaaattgctggccaacagcagctatgtagtccaggtggttgcgctg
tgcaacaatggcctgaagggtcgtatgagtgaccaggtggttgtggatatgccactggag
gacctggagggcgatcctgaacctttcacagattctccagactctgaagattattttgag
gtgactccatccactggcagaggacgcccggatctggagtcccctccggaccgggtcctc
acaagcgattcctcatcctccaaaagctccatctgggtcaccctggcaaccgaccagcct
ggcttcctcttccccggcgtcaagggcagcgccgctcccgtacggagacgcatcacagag
gagtcctcattgtcatggactcccggccgggacaaggcagagacctacacccgtaagccc
ctcaccaagctgctcacgccggagggggtcaaacctccagacggcgtggtggtcacggac
atctacttcgaggacttcctcaacaactccctctatgagacgaccacatcagtgggcatg
ccgtcccccgacgaggagatagtcggcatggttaccctgccccgggagcgtgtgtatgtc
tccccgaaggacaatgaagtgagaaggccagacgacctgtatttaccaggcgccgtcacc
aatcccctgccagagacaccggtcatcagcagcacccagcagcctgagatggtcaccacc
accacctcagtgccagctacctctactgctgctgcagggacccagaccactaccaatgcc
ttactctacaccacccagccaatgttcaatgaggccagtaacagcagccccgagtcccgg
gtgggcatggtggggggcgtggagagggagaagcgcacggtggtacccctggcagtggtg
tccaccctcaccatcctgtgcctactggtgctggtgggcatcctcatctactggaggaag
tgtttccagacggctcacttctttgtggaggataacacctctcccagggtcttctcagct
ccatccacgcccctactcttacccacgggcacagaggagaatgaagccctccctgttaag
gactttgtgaaacatgtcgctgagcttcacaccacacacacgttctctaaagagtttgag
atcttgaaagagtcttacgaggagattcagtcctgcactgtggacatgggcatgaccacc
gacagctctaaccacccagacaacaagggcaagaacagatacatcaacatcctggcctac
gaccacagccgagtgaagctggcacccaatcttgataaggagggagagtgcggagactac
atcaacgcaaactatgtggatgccttcaaccaccccaaagccttcatagcagcccagggc
ccaatgaaggccagtctggaagacttctggaggatggtctgggagcagaacgtgggtgtg
atcgtcatgatcaccaacctggtggagaagggacggaggaagtgtgatcagtactggcca
atggacaaccaggaggagtatggatgcttcttggtcactctgaaaagcaccaaagccctg
gcctactacacacaaagaacatttaccttgcggaacatcagcatcaaaagggggtcccaa
aagggccgcagtcaggagcggattgtccgccaataccactacacccagtggcctgacatg
ggggtcccagactacaccctgcctgtcctgtcattcgtccagaagtcctcacgggcccgg
accgctgacatggggcctgtggtggtccactgcagtgctggcgtgggaagaacaggtacc
tacatcgtgctggacagcatgcttcggcagatcaaagagcagggcacagtgaacatcatg
ggcttcctgaaacacatccgcacacagaggaacttcctggtgcagaccgaggagcagtat
gtgttcatccacgatgccctggtggaggccatcctcagcaaggagacagaggtctcctcc
agccgcatccatgcctacgtctccgacctcctgacccccggcccctcgggcaagaccagg
ctggagaagcagttcaagctggttagccagaccaatgtgaagcaatgtgattacacatct
gcgctaaaagagggcaacgtggagaagaacaggacctcctctctcatgccagtggagagg
tccagagtgtgcctatccactacaccaggagagtcctctgactacatgaatgcctcttat
gtcatgggttaccgtcagagctgtgaattcatcattacccagcaccctctgccctgcaca
atcagggacttctggaggatgatctgggaccacaactcccagatcattgtctcccttcca
gacatccatggccaggttgaggaagatgagtgtgtgtactggcccattaaagaccagcca
atcaactgtgagacatttactgtaacctttactggggaggacaatgtgtgtttgcctaat
gaggagctgttggtagttcatgactttctactggaagctacacaagatgactatgttctg
gaggtgcgtcagtaccggacccctcgctggcccaacccagacagccccatgagcaacacc
tttgagctgatcaacatcatcagagaagacacgcgtcaccgggagggaaccatagtcgtt
cacgatcggtatggggggtccactgctggaatgttctgtgccgtgacgacgttggcagac
caggtggaggaggagaactgtgtggacgtgtaccaaacggcccggatgaccaaccttatg
aggccgggggtcttcactgacatggagcagtatcagttccttttcaaagctatcctgagc
ctggtgagcaccaaagaggacgagaagaccctgcggtcctccgagaacaacggcaccatc
cccacaggctcggccaatgccaccgagagccttgagtccctcatgtaa
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