KEGG   Clupea harengus (Atlantic herring): 105896741
Entry
105896741         CDS       T09045                                 
Symbol
trip11
Name
(RefSeq) thyroid receptor-interacting protein 11
  KO
K23368  thyroid receptor-interacting protein 11
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105896741 (trip11)
Membrane trafficking [BR:char04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab associated proteins
    105896741 (trip11)
  Retrieval pathways
    105896741 (trip11)
SSDB
Motif
Pfam: GRAB Mod_r CALCOCO1
Other DBs
NCBI-GeneID: 105896741
NCBI-ProteinID: XP_012679003
Ensembl: ENSCHAG00000017105
UniProt: A0A6P3VRC1
LinkDB
Position
14:21369844..21389873
AA seq 1967 aa
MSSWLGGLGSGLGQSLGQVGGSLSSFTGQISNFTKDILLEGAEEVGDAATELQVSKSRLE
DLEATSASQKSEYDRLRKIHAELEERFEASELQNKQLSTEYRTILQQKEVEISHFKARQS
ALQEEMQKLERSAHHAVASSLSSEPALLPVTTSATGTTTSSAFMRHSTGAHHGFHGDEMD
FSDVLWSQQEINRLSNEVQRLEAEASHWRRSAQASKTSGGESDDQGEMLKLQRIIKELRE
SMGHEVDQHQHELTALQDVQRQKMAEVTRRHRQELAEYEERIEELEEQLQNDSNLSPASL
NPPGHEHQDKKLLELTASLEEAAGQRASLEQEREEARAENAELMHNYSRLQSSVSELQAR
VQEQEGKAMLKAQQDAEIQALKKALDGAEKEITTLKDLIESEPKTEVEHADILELNTIIG
TLKTEKDELEKEMHALAARLQTAEERVAEAAVGESGGVEQGEVAELKAQLEKKKQALTQA
QLDQDTLTAELEELDRQNQEATQHLIALKDQLSCQRTEADDEMIHLQSDLSAAQDQKGAL
QQQLEAMKEKLSQSAFTLNDLHMGRQQLEATVKELRDKLSKSHEQAKEIRHEASELKATL
KERESELEMVQHKLGEAGERQGESEGHRKELDDKERELDEVRTELAEMRNSHEKVKSEDY
EMKMENRRLKEEGAQALAKVEELSRQVQDGQAGLSRTVLEKDTRIEAHKLEKSQLEGELT
QAEKRLSDQTKQYQQTIEELSRARSMDATALQTEHERAVKLNQEKDLEIGQLRRDIEQLT
ADHKDTDEMLSITVAGQKQLTELLQEKDGFAELLKAKAAETQKEMEETIARANQETESLK
RSVEDKDKQQGVMKEENSHLKEEIDRLKDQQSRPQPMSEPRTLDIITELETEVTQLKVAR
DRLDEEAQSLRAAAEEQRSTLLQAQHALQVQQSELEQARSRHEQNTLNYERLITAKDEEI
ARLQEAAENPLQSPPSRDILQEDDKTQSLSRDNGNEKHDFSKVEIDKLVKGIKEKENEIS
QLNEKNLSLTKQLDQLVVSRDEMGKLSQMVRQKDLEIQTLHARVSMSGAGGHSQDVLFLQ
QQLQAYAVEREQVLAVLNEKTRENSQLRSDYHHLMDVVAGKEAALLKLQQENQRISCSSD
PTGSQEMFRETIQNLSRIIREKDIETDALTQKCQTLVTVLQASSAGDLGGGGSGVSSNQF
EELLQERDMLKQQVKKMEEWKQQVITTVKNMQHESAQLHEELLKLQGQVTADSACSSSLS
GDYARLIQSYEQKEKRLGSLGQQLVHVQQSISQLSSTKEVLLGKLDCVVQSPDTLVMAPP
PMAAPPVAVESSLQQGAAATNEGLRQELEFLRRQLAERNVTVQTLQENNGRLSDAAAASE
GEQRGKAEAMRQLRERLESIQRSLREKDLLIQSKGEQLNQATESLRNRESDNELLRQAVT
NLKERALILELDARKLREENEQVVARSREKESEFRALQETNMQVSLLLREREFQWNSASE
KAATMEKMLKDREQGKSCELNQLLNEVRSMQEKAVTFQQERDQVMLALKQKQMDTTALHS
ETQHLRDKEQRQQQELGRLRNHLLEMEESHTRELVAAEDREAELRRRVALLTSSSSAVEN
ASQQASLQVESLQEQLNGVIKQRDEALLQLRATQEQLNQYAMSLSNLQMVLEQFQQEEKA
MYSSELDKYKREKDEWRRKAEKFADEAAALKLNLDEATAALDSASRLTDQLDLKEEQIED
LQKQASVRQEMLEDSQNKLVNLLNSTEGRVDKVLMRNLFIGYFHTPRNKRSEVLRLMGSV
LGVEREEVDSMLEDEGRHGVTGWMSNWLGGRAVQSVPNTPQRPNQAQSFNSSFSEMFVKF
LETESTPSLPAPKLPVYDIKPLGAPPPGRMSASTPAAGGALGPGKRASESNPFLAPRSAA
VPLLHPGGGAGAGSGHLLMKPISDSLPSFTPVPVSAEASGLKDLLKQ
NT seq 5904 nt   +upstreamnt  +downstreamnt
atgtcttcctggcttggtggattgggctcggggcttggccagtcactcggccaggttgga
ggaagcctatcgtcgtttacaggacaaatctcaaatttcaccaaagacatacttctggag
ggggcggaggaggttggagatgctgccacagagttgcaggtgtccaaatctagactggag
gaccttgaagctacctctgcttcacagaaatctgagtatgaccgtcttcgaaagatccat
gcagaactggaggaaaggtttgaagcgtctgagctgcagaataaacagctgtctacagaa
tacaggaccatcctgcaacagaaagaggtggaaatcagccacttcaaggctcggcagagt
gccctgcaggaggagatgcagaagctggagcgctcagcccatcatgcggtcgcctcctcc
ctctcctcagagcctgccctgcttcctgtgacaacctcggccaccggcaccaccacttcc
tccgccttcatgcgccactccaccggtgcccaccacggcttccatggtgacgagatggac
ttcagcgacgtgctgtggtcccagcaggagatcaaccgcctgtccaacgaggtgcagcgg
ctggaggcagaggcgtcccactggagacgttcggctcaggcctccaaaacatcaggagga
gaaagtgatgaccagggcgaaatgctgaaactgcagaggattatcaaggagctgagggag
tctatgggccatgaggtagaccagcaccagcatgaactgacggcactgcaggacgtccag
cggcagaagatggccgaggtcacgcgcagacaccgccaggagctggccgaatatgaggag
cgcatcgaggagctggaggaacagctacagaatgacagcaacctcagcccagcatccctg
aatcctccagggcacgagcatcaggacaagaagctactcgagctgacggccagcctggag
gaggccgccggtcagcgtgcctctctagagcaggagagggaggaggcgagggcagagaac
gctgagctgatgcacaactatagccgcttgcagagctcggtgtccgagctgcaggcacgc
gtgcaagagcaggagggcaaggccatgctcaaggcccagcaggatgcagagatccaggca
ctaaagaaggcactcgatggggcagagaaagagataaccacgttaaaagatcttattgag
agtgagcctaagactgaggttgaacatgcagacatcttggagctcaacacaataattgga
accctgaaaactgagaaggatgaactggaaaaagaaatgcatgccttagcagcaagactg
cagactgcagaggagagggtagcagaggctgcggtgggagagtctgggggtgtggagcag
ggggaggtggcagagctgaaggcccagcttgagaagaagaagcaggctttgactcaagcc
caactggatcaggacacactaactgcagagctggaggaactggataggcagaaccaggag
gccacacagcatttgattgccctgaaggatcagctctcctgccagagaactgaagccgat
gatgaaatgatccatctgcagtcagacctcagtgcagctcaggaccagaagggggcgctg
cagcaacaacttgaggccatgaaggagaaactcagccaaagtgcctttaccttgaatgat
ttacacatgggcaggcaacagctggaggccacagtaaaggagttgagagacaaactgagc
aagtcacatgagcaggccaaagagattcgacatgaggcctccgagctgaaagcaacattg
aaggaacgagagagtgagctggaaatggtccagcacaagctgggcgaagctggggagaga
cagggtgaatccgagggacatagaaaagagctggacgacaaggagagggagctggatgag
gtcaggacggagctggcagagatgagaaactcccacgagaaggtgaaatccgaggactat
gagatgaaaatggagaaccgccggctgaaggaagagggcgcacaggcgctggctaaggtg
gaggagctcagtaggcaggtgcaggatggccaggcaggccttagcaggacagtgctggag
aaggacacccgcatcgaggctcataaactggagaaaagccagctggaaggcgagctgacc
caagctgagaagcgcctctctgaccagaccaaacaataccagcagaccatcgaggaactg
agtcgagcccggtccatggatgccactgccctgcagactgagcatgagcgggcagtcaaa
ctcaaccaggagaaggacctggaaattggccagctgagaagagatattgagcagctgaca
gctgaccacaaggacaccgacgagatgctttccatcacggtggcagggcagaagcagctt
accgagctcctgcaagagaaggatggctttgcagagttgctcaaagctaaggcagcagag
acacagaaggagatggaagagaccattgccagagcaaatcaggagacagagtccttgaaa
cgttcggtggaggacaaggacaagcagcaaggtgttatgaaagaggagaacagccacctg
aaggaggagatcgacaggctaaaggaccaacaaagccggccgcaaccgatgtctgagccc
cggacattagacatcatcacggagctagagacagaggttacccagttgaaagttgctcgt
gatcggcttgacgaggaagcacagtccctgagggctgcagcggaggagcagcgtagcact
ctcctccaggcccagcatgccttgcaggtccaacagagtgagctggagcaagcgcgatca
cggcatgaacagaacaccctcaactacgagcggctcatcacagccaaggacgaggagatc
gctcgcctgcaggaggcagcagagaatccactccagtccccaccaagcagggatatcctg
caggaggacgacaagacccagtcactcagcagggataatggcaatgagaagcacgacttc
tcgaaggtggagatcgataaactggtgaaaggcatcaaggagaaagagaatgagataagc
cagctgaatgagaagaacctgtccctgaccaaacagctggaccagctggtggtgtcccgt
gatgagatgggcaagctttctcagatggtgcggcagaaggatctggagatccagaccctc
cacgctcgggtgtccatgagtggtgcagggggacacagccaggacgtgctcttcctccag
cagcagctgcaggcctacgctgtggagcgggagcaagtcctcgctgtgctcaatgagaag
acacgggagaacagccagctgcgctctgactaccaccatctcatggatgtcgtggccggg
aaggaggcggctctcctaaagctccagcaggagaaccagcggatctcctgctccagcgat
cccacggggagccaggagatgttccgtgagaccatccagaacctgtcccgcatcatccgt
gagaaggacattgagactgatgcgctgacacagaagtgtcagacgttggtgaccgtcctc
caggcgtcgtcggccggggatttgggcggtggcgggtcaggcgtgagcagtaaccagttt
gaggagctgctgcaagagcgtgacatgctgaagcagcaggtgaagaagatggaagagtgg
aagcagcaggtgatcaccacagtgaagaacatgcagcacgagtcggcacagctgcacgag
gagctgctcaagctgcagggccaggtgacggccgacagtgcctgcagctccagcctgtct
ggcgactatgcccgtctcatccagagctacgagcagaaggagaaaaggctaggctctctt
ggccagcaacttgtccatgtgcagcagagtattagtcagctcagcagtaccaaagaggtc
ctgctggggaaactcgattgtgtagtacagagccctgatactttggttatggccccacct
ccgatggctgcccctccagttgcagtggagtcctccctccagcagggagcagcagctaca
aacgaggggctgagacaggaactggaattcttgcgccggcagctggctgaacgcaatgtc
actgtccagacgttgcaggagaacaacggacgtctgtcagacgcagctgctgcctccgag
ggtgaacagcggggaaaggcagaggcgatgcggcagctccgtgagcggctagagtcgatt
cagcgctctcttcgggagaaggacctgctgatccaatccaaaggtgagcagctaaaccag
gcgaccgaaagcctgcggaaccgcgagagcgacaacgagctgctgcggcaggccgtcacc
aatcttaaggaacgggcactgatcctggaactggatgcccgcaagctccgtgaagagaac
gagcaggtggtggcacgctctcgcgagaaggagtctgagttccgggcgctccaggagacc
aacatgcaggtgtcgctactgctgcgcgagagggagttccagtggaattctgccagcgag
aaggccgctaccatggagaagatgctcaaggacagagaacagggcaagtcgtgtgaactg
aaccagctgctgaacgaagtgaggtccatgcaggaaaaggccgtgacattccagcaggag
agggatcaagtgatgctggcactcaaacagaagcaaatggacaccacagctctccacagt
gagacgcagcacttgcgggacaaggagcagcggcagcagcaggaactggggcgcctgcgc
aaccacctgctggaaatggaggagtcgcacacgcgggagctggtggccgccgaggaccgc
gaggctgagctgagacgtagggtagcgttgctgacatcatcctccagtgcagtggaaaac
gccagtcagcaggccagtctgcaggtggagtccctgcaggagcagctgaatggggtgatc
aagcagagagacgaggccctgctgcagctgcgcgccacccaggagcagctcaaccagtac
gccatgtccctctctaacctgcagatggtgctagagcagttccagcaagaggagaaggcc
atgtactcatcagagctggacaagtacaagagggagaaggatgagtggaggagaaaagca
gaaaagtttgcagatgaagctgcagccctgaagctgaacctcgatgaggccactgctgca
ctggactccgcttccagactgactgaccagttggatctcaaagaggagcagatcgaagat
ctgcaaaagcaagcgagcgtgaggcaagagatgctagaagattcccaaaacaagttagtg
aacttgctcaacagcactgagggcagagtggacaaggtactcatgaggaacctgttcatt
gggtacttccacaccccgagaaacaagcgctcagaggtgctgaggctcatgggtagtgtc
cttggagtggaacgagaggaggttgacagtatgctggaggatgagggacggcacggggta
actggctggatgtccaattggctgggtggcagagcagttcagagtgtccccaacactccg
cagaggcccaatcaggctcagagcttcaactcgtctttctcggagatgttcgtgaagttc
ctggaaacagagtccacgccgtcacttccagcacctaagctgcctgtctacgacatcaaa
cccctaggtgcgcctcctccgggccggatgtccgccagtacgccagcagcaggtggggca
ctaggacccggcaagcgagcttcagagtccaatcccttcttggctcctcgctcagctgca
gtgcccttgctccatcctggaggtggcgctggagcaggcagtgggcacttgctgatgaag
cccatctctgactctcttccttccttcacgcccgtccccgtctctgccgaagccagtggg
ctcaaagacctactcaagcaatga

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