Clupea harengus (Atlantic herring): 105896776
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Entry
105896776 CDS
T09045
Symbol
brcc3
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03440
Homologous recombination
char04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105896776 (brcc3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
105896776 (brcc3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105896776 (brcc3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105896776 (brcc3)
03036 Chromosome and associated proteins [BR:
char03036
]
105896776 (brcc3)
03400 DNA repair and recombination proteins [BR:
char03400
]
105896776 (brcc3)
Peptidases and inhibitors [BR:
char01002
]
Metallo peptidases
Family M67
105896776 (brcc3)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
105896776 (brcc3)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
105896776 (brcc3)
BRISC complex
105896776 (brcc3)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
105896776 (brcc3)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
105896776 (brcc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
REP_ORF2-G2P
DUF7385
Nucleoprot-TPR
Motif
Other DBs
NCBI-GeneID:
105896776
NCBI-ProteinID:
XP_012679032
Ensembl:
ENSCHAG00000012002
UniProt:
A0A6P3VRH8
LinkDB
All DBs
Position
20:548401..554416
Genome browser
AA seq
260 aa
AA seq
DB search
MAVSAVYLGSDAFLVCMNHALSTEKEEVMGLCIGEVDTNRVVHIHSVIILRRSDKRKDRV
EISPEQLSAASTEAERLAEITGRPVRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVVPHEAIGKVCLESAVEL
PRILCQEEQDTYRRIHSLTHLDPVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNT
QSILELQQEKERLALELASL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggctgttagtgcagtttatctcggatcagacgcctttcttgtttgtatgaatcatgcc
ttaagtaccgagaaagaggaggtcatgggactgtgcatcggagaggttgatacgaatcgt
gtcgttcacattcattccgtgatcatcctgcggcggtcggataagaggaaagatcgtgtc
gaaatatcaccggagcagctctctgccgcctcaaccgaggcagaaaggttagctgagatc
accgggcgcccagtcagggttgtaggatggtatcattctcatcctcacatcacagtgtgg
ccatcacacgtcgatgtgagaacccaagccatgtatcagatgatggaccaaggatttgtt
ggacttattttctcttgtttcattgaggacaagaacactaaaacgggccgagttctttat
acctgtttccagtctgtacaggcgcagaaaggctcagagtatgagagaattgagattcca
attcatgtggttccacatgaggcgattggtaaagtctgcctggagtctgcggtcgaactt
cccaggatcctttgccaagaggaacaggacacatacagaaggattcacagcttaacacat
ctggaccccgtcacaaagatccataacggctcagtattcaccaagaacttgtgcagtcag
atgtctgccgtgagcggcccgctgctgcagtggctggaggaccgtctggaacagaacacg
cagagcattctagaactccagcaggagaaggagcgcctcgccctggaactagcctctctt
tga
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integrated database retrieval system
