Clupea harengus (Atlantic herring): 105896800
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Entry
105896800 CDS
T09045
Symbol
si:ch211-225b11.4
Name
(RefSeq) thyroid adenoma-associated protein homolog isoform X1
KO
K24169
thyroid adenoma-associated protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
char04990
]
105896800 (si:ch211-225b11.4)
Domain-containing proteins not elsewhere classified [BR:
char04990
]
Other domain-containing proteins
Armadillo repeat domain-containing proteins
105896800 (si:ch211-225b11.4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2428
TPR_Trm732_C
TPR_Trm732
HEAT
Motif
Other DBs
NCBI-GeneID:
105896800
NCBI-ProteinID:
XP_031425897
Ensembl:
ENSCHAG00000001065
UniProt:
A0A6P8FRY8
LinkDB
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Position
7:135741..173927
Genome browser
AA seq
1853 aa
AA seq
DB search
MDTRFVTTVLRDDISPPDLTDDLKLLFGKLTECRRSCLKRCKERSLEEAFKILKERIQLQ
SLERSQLLSLVKLLVAMQMDAMDVSVLCRKLDQMVQFVGEMNSDIVFEEVQRHTNTIMHS
DQIMSIRDLQLVSMFLESSTLGQGMFRQECHSLLAKIAEVFVSSQGGDDFRDEALCYQAV
KVCLQIFQLLPKEVSPMVFGTEETNPVMSRILGFLMDILLGWSTNKDTRLLAGTAVAMLV
NTAPNENAARMAALSLLHLTRTEPRQLTLGGLQVQCHCRAEDGLQRLALSRGLLTACRKD
ILAYGLDPRETCLLLDIFPVVAALCEDSLDDHYYAFQVFTLWLKCLKACLPSIWKMSSVP
LMGQDSSLQCQVIEVIWNNAESPIEGITESVRSALCLFMEIYECDCRHHDDAERVLYREL
LHRTIELPWETKAKYLFLCALLPYLGSGKVLENYAEFPAHLLKCLSINHLSPWACEFYKS
FIQEQRRELCKMQPSPPSEFELASKWSQYWQATLLEALTSDVKLLQTNAVSHLLPWTLRT
FPSASMMLMDPLDPTSQGHLRAWTCIMSCHRATCGGSSWISEGSHAFQTLQNALTSLDDG
VRLAALNVLCCSPKSTEMPSALEFSALRNFIPLNLNSEAPAFRQQLYSAVKKFLCRVRDT
CLAKVLKSKSKMGLALEDKNILCKGVEFVDWVAELAFLYLNPVSNYQRKRTVLLLLSAVL
ETCTDTWSPEKKKGQPPANISTLITWARSKGRWDFFSKSKQLVLINCLEDMTNEICELSA
EVLVLYFPKFPDDVIPLVFRRAEHLLHSPRPQDSQTGALMMKVLLQIRSENLSPAWRKSR
VHGDGNITSLCQYLLQLIQQQYLTAKTDMLTASQTAPLHGAVTALQRCLLEVPGVLCKEM
DDDMIRKTLSVMENMTVLLLGVLYGDQDTESKEVPPSFFEMGNAISCVIGQQLGSDDPGE
EYVLLSEEHSLVLSCCWISLKEIGIFLGSLVERMVAGGPNKLDHSVTAHDMKRMAKLYKD
IILKCRHWGAVEGCCRGFIKFCSTLLFSADPEVRDIPAQLLKEGLQLLQSPRGTSVTRRA
AGLPMLFLCVVSAAESSQSRSLLPLSINTLLEVANGPLPDNWDQTLDLPQVCAVHTLNAL
VRGSSLGVAIQKYCSEMTTLALTLLNSCCWAVRNAALQLYSSLCTRMLGQSPGSVHASTQ
CGMCPLTFFTHYPSLLPFLLAQLRDAALDLQDSSQLRRLCVHPSLYPVLTLLAKLQPGLQ
TETRELSDAVTLLLQLASSPVYSIRVMASKALVAMMPCAKYTVYLIKLVEELPKSGEEPC
FHNYLHGQLLQIRAILTQVLHTDKTALNSLRLFVEVLESKIWLVTSGQKCLLIRVFYLDV
VCLVRSCCSKGFLHQLCALLLSELHTSPHHTQVGSDSFHEAVVYFLCEDPSWVCLVWQRF
SSWSAALKLPLLRWASEGGGSSMTDIQPLLEKTLQVNLKDVLLNEDTEIRGVYLKALVSV
MAGGVGGLVLEETAIQECAEILVRSLEVSDGGSEYRSRALCAISLLLSESLDWTLCPRWC
SLLERHMVPHASEALRLACAESLCLAGGPLMRKDQKDNVHKPDLSLRLINTGLWLLQDQS
EHVRVKAAVFVSKVRNPTPRGRGRQQSSFLIHVNQSMLMLLDLLLEEFWDHSGILEVLLS
HLPESDFSSVLKDTKESKFSSLYERDDANVYVEPLAVSESLLPYLLQLAGRYSESSTLAQ
RLDHWVKDHLAQVLENLTVCKKIVSGLQSLESSWLSFLSDPLFHTNLCGLFARAIFLNQL
LISGELHPLCDSTTLSRDLLDVHRQLCMNGVFLPQIFPDAVMRLLEKSNIQVV
NT seq
5562 nt
NT seq
+upstream
nt +downstream
nt
atggatacacgttttgttaccactgtactaagagatgatatctcacctcctgatcttacg
gatgacctgaagctccttttcggcaaactgacagaatgcaggaggagttgcctaaagcgc
tgcaaagagcgttccctagaggaagctttcaagattctcaaagaaagaattcagctgcag
tctttggagaggtcacagcttctctcactcgtcaagctgcttgttgctatgcagatggat
gctatggacgtttcagttctatgtcgaaaacttgaccagatggtccagtttgttggtgaa
atgaattcagatattgtttttgaagaagttcagcgacacactaataccataatgcacagc
gaccagattatgtcaatcagggatctccagttagtgtccatgttcctggagagcagcact
cttggccagggaatgtttcgacaagagtgccattctctactcgccaaaatcgctgaagtg
tttgtgtcttcccaaggaggggatgattttagagatgaagctttatgttaccaggctgtt
aaggtttgtctacagatttttcagttattgcccaaagaagtgtcccctatggtgtttggg
acagaagaaaccaaccctgttatgagccgcattctggggtttctcatggacatccttcta
ggatggagcaccaacaaagacacaagacttttggcaggcacggcagtggccatgctggtt
aacacggctccgaatgagaacgctgcaaggatggctgcattgtctctccttcacctcact
agaacagaaccgaggcagctgactctgggaggacttcaggtgcagtgtcattgcagagca
gaggacggattgcagagactggctttgagccgaggtttactgactgcctgcaggaaggac
atccttgcctatggccttgatcccagggagacttgccttctcctggatatattccctgtt
gttgctgctctgtgtgaagattcattagacgatcactactatgcattccaagtgtttacc
ctttggctaaaatgcctgaaggcgtgtctgccatctatatggaagatgagcagtgtccca
ctgatgggacaagactcaagtcttcaatgccaagtcattgaggtcatttggaacaacgcc
gagagcccaattgaggggatcacggaatctgttcgcagtgccctgtgtctatttatggaa
atctacgaatgtgactgtcggcaccatgacgatgcagagagggtactctaccgggaactg
ctgcatcgcactattgagttgccctgggagaccaaagccaagtacttgttcctctgtgct
cttctgccatacttgggctctggaaaggttttagagaattatgctgagtttcctgctcat
ctcttgaaatgcctctccatcaatcatctttctccatgggcctgtgagttttataaatca
ttcattcaagagcagcgacgagagttgtgcaaaatgcagccatcaccaccttcagaattc
gaactagcctctaagtggagtcaatattggcaagcaactctcctggaggcactaacctcc
gatgtgaaactcttgcagaccaatgcagtcagccaccttctgccttggactctgcgtact
tttccatctgcttctatgatgctgatggatcccctggaccccacctcacagggccatctc
agagcgtggacctgcatcatgagctgtcacagagccacctgtggaggatcctcttggata
tctgagggtagccatgcgtttcaaactctgcagaatgccttgacttctcttgatgacggt
gtccgtttggctgcactcaacgtgctgtgctgcagcccaaaatccacggaaatgccaagt
gccttggaattctcagccttgaggaacttcatccctctcaacctcaacagcgaggcacca
gcattccggcagcagctttactccgctgtgaagaagtttctctgcagagtgagagacact
tgtttggccaaagtgctgaaaagcaagagcaagatgggccttgctctagaggataagaac
atactctgtaaaggggttgagtttgtggactgggtggcagagctagctttcctctaccta
aatcctgtaagcaattaccagagaaagaggactgttctgttactgctgtctgctgtgtta
gagacatgcaccgacacctggagccctgagaagaaaaaagggcagccaccagctaatata
tccacattaattacctgggccagatcgaagggaagatgggacttcttttccaagtcaaaa
caactggttctcataaactgcttggaagatatgacaaatgagatatgtgaactgtctgct
gaggtgcttgtcctgtattttcccaaatttccggatgatgtcattcccttggtattccgc
cgtgctgagcatttgctccacagtccccgccctcaggattctcaaacaggcgccctcatg
atgaaggtccttctacagatcaggtctgagaatctgtctccagcatggcgaaagagcaga
gttcatggagatggaaacatcacctcactttgccagtacctccttcagttgatacagcag
cagtacttgacggccaaaacagacatgctgacggcttcacagacagcaccccttcatggt
gctgtgacggctttacagaggtgtttgctggaggtgcctggtgtcttgtgtaaagaaatg
gatgatgacatgatcagaaagactctcagcgtgatggagaacatgaccgttctcttgctt
ggtgtgctgtatggggaccaggacacagaaagtaaagaggtccccccatccttttttgaa
atgggaaatgcaatcagctgtgtgatcggtcagcagttgggttctgatgatcctggggag
gagtatgtcctgctttcagaggaacacagcctggtgctcagttgttgctggatctcacta
aaggaaataggaatatttctgggctcccttgttgagaggatggttgccggggggccaaat
aagctggatcactcagtgactgcacatgatatgaagaggatggccaaactgtataaagac
attatcttgaagtgtcgacactggggggcagtagaagggtgctgccgtggattcatcaag
ttttgcagcactctgctgttcagtgcagacccagaggttcgagatatccctgcacagttg
ctgaaagaaggtctccaacttctccagtctccccgtggcacctcagtgactcgtcgagcc
gcaggtctcccaatgctcttcctctgcgtggtttcagccgctgagtccagtcagagcagg
tctctgctccccctcagcataaacacccttctggaggtggcaaatggccctctaccggac
aactgggaccagactcttgatctaccacaggtgtgtgctgttcatactctaaatgcttta
gttcgtggatctagtctgggtgtggccattcagaaatattgttcagaaatgaccaccctt
gccctgactcttctcaactcctgctgctgggccgtgaggaatgcagcattgcagctttat
agttccctgtgcacacgaatgcttggccagagccccggaagtgtgcacgcctccacccag
tgtggcatgtgcccgctgaccttcttcacccactacccttcgctgttgcccttcctcctc
gctcagctcagagatgccgccctagatcttcaggattcgtctcaactcagacgactgtgt
gtccatccctccctttaccctgtgctgaccctcctggccaaactccagcctggacttcaa
actgaaaccagagaactttcagacgctgtgacactgttgctccaattagcctccagtcct
gtgtacagcatcagagtgatggcgtccaaagcactcgtggccatgatgccttgcgctaaa
tatactgtttacctcatcaagctggttgaagagttaccaaaatccggagaggagccctgc
tttcacaactatttgcacggccaactccttcagatcagagctatactaactcaagttctg
catactgacaaaactgccttaaattcactccgtctatttgtggaagtgttggagtccaag
atttggcttgtgacaagtggccagaagtgccttctgatccgagtgttctatctggatgtg
gtctgcctggtgaggagctgctgctccaagggcttcctgcaccagttgtgtgcactgctt
ctgtcagagcttcacacctcaccacaccacacacaggttggctcagactcctttcacgaa
gcagtggtttacttcctgtgtgaagatccaagttgggtgtgtctggtgtggcagcgtttc
tccagttggagtgctgctcttaagctgccattgctcagatgggcgtcagagggaggcggc
tcaagtatgaccgatatacagcctctgctagaaaagactttgcaggttaacctgaaggac
gtgttactgaatgaagatactgaaatcaggggagtgtatctcaaggccctagtatcagtc
atggctggaggagtcggtggcttggtactggaggaaacggctatccaagaatgtgcagag
atcctggttaggagcttggaggtctctgatggggggtccgagtaccgctcacgggccctg
tgtgccatcagcctgctactctctgaaagcctggactggaccttgtgtccgcgctggtgc
agcctactagagcgtcacatggtgccacacgcctcggaggccctcagactggcctgtgct
gagtccctctgcttggcaggaggtcctctgatgcggaaagaccagaaagacaacgtacac
aaaccggatttgagcctcaggttgatcaacacaggcttgtggttacttcaggatcagagt
gaacatgtgagggtgaaggctgctgtctttgtgtcaaaggttcgcaatcccaccccaaga
ggaagaggacgacagcagagttcttttttgatccatgtcaaccaatccatgctcatgctc
ctggacctgctcttggaggaattctgggatcactccggcattttagaggttttactttcc
catttaccagagtcagacttcagcagtgttctaaaagacaccaaggaatcaaaattcagc
agtctgtacgaacgagacgatgccaatgtgtatgtggagcccttggccgtcagcgagtct
cttctgccctatctgctccaactggctgggaggtactctgaatcgtcaacgctggcacag
aggctggatcactgggtgaaggatcatttggctcaagtgctcgagaaccttacagtctgt
aaaaagattgtatcaggcctgcagagtctggaatcttcttggctgagctttctttcagat
cctcttttccacaccaatctgtgtggacttttcgcaagagcaatctttctaaatcaactt
ctgatctctggcgaattgcaccccctctgtgatagcactactctgtctagagatttgctg
gatgtccacagacagctttgtatgaatggagttttcttgcctcaaatctttcctgatgct
gtaatgaggttgttggagaagtcaaatatccaggtggtctag
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