Clupea harengus (Atlantic herring): 105896815
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Entry
105896815 CDS
T09045
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04517
IgSF CAM signaling
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
105896815 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105896815 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105896815 (sptbn1)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
105896815 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
105896815 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
CH_2
SOS1_NGEF_PH
Flavodoxin_NdrI
Motif
Other DBs
NCBI-GeneID:
105896815
NCBI-ProteinID:
XP_031418082
Ensembl:
ENSCHAG00000024710
UniProt:
A0A6P8F4P2
LinkDB
All DBs
Position
24
Genome browser
AA seq
2353 aa
AA seq
DB search
MTTVAAELDHMELQQQYVGDTVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLSRMSCRITDLYMDLRDGRMLIKLLEVLSGEKLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALL
LWCQMKTAGYTNVNIRNFTTSWRDGMAFNAILHKHRPDLIDFDKLKKSNVHHNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALKVEGKRVGKVLDHAIET
EKMIDKYESLASDLLEWIEQTVIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKTWERLEKAEHERELALRMELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIGAYEERVQA
VFAVARELEVENYHDLKRINARRDNVQRLWEYLLELLKARRHRLEMNLGLQRVFQEMLYI
MDWMDEMKMLLLSQDYGKHLLGVEDLMQKHALVEADIGIQADRVKAVNNNAQKFAVDEEA
GYKPCDPQVIRDRVSHMEFCYQELIQLAAERRARLEESRRLWKFFWEMAEEEGWMREKEQ
ILSSDDCGKDLTGAVRLLSQHRALEDEMSGRATKLHATAQEGDDMADAGHFGADRLRERG
AEVRAQWAALEALAAARKARLEEACALHQFLVDADDADAWTLDALRVVSSGDLGHDEFST
RALAKKHKDAAEEVASYRPALDALHEQARALPPRDADSEEVKGRLVGIEERYAEVVELTR
LRKQALNDALAFYKMLSEAEACEVWIDEKQQWLDHMEIPEKLEDLEVIQHRFESLEPETN
NQASRIAVVNQIARQLIHNGHPSENDIKAQQEKLNTRWSQFRELVDRKKELLQSALGVQN
YHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLKGEA
ARLGEEHPDQASAITGQLEEIAAVWEEMKETLRAREESLGEASKLQGFLRDLDDFQAWLS
RTQTAIASEDMPNTLAEAEKLLAQHEAIKNEIRNYEEDYQKMRDMGEMVTQGQTDAQYMF
LRQRLQALDTGWNELHKMWENRQNFLSQSHAYQLFIRDTKQAEAFLNNQEYVLAHTEMPT
TLEGAEGAIKKQEDFMTTMDANEDKINGVVEAGRRLAGDGNINAEKIQERVDSIDDRHKK
NREAAVELLMRLKDNRDLQKFLQDCQELNLWINEKMLTAQDMSYDEARNLHSKWLKHQAF
MAELQSNKEWLDKIEKEGKQLVSEKPETDAVVKEKLGMLQKQWEDLESTTQTKAQCLFDA
NKAELFTQSCADLDKWLAGLEGQIQSDDYGKDLTSVNILLKKQQMLESQVEVRQREVGEL
QSQAHALSEEGRDTEEVDGQRQVVECKFQELLDPLRKRKNLLMASREIHQFNRDVEDEIL
WADERMPIAMSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRFDDIFERSQSLEGDESPGA
EAIRVRLDDLQGLWGQLKEETEKRHGRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQCSVAMLKKHQILEQAVEDYAEAVHQLSKTSRGLTAAGHPESERIGMRQSQVDKLY
AGLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGTIGQERVDSVNRMADELINAGHTDAATVAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEILGRVLDKHKRLPEELGRDQNTVDTLQRMHTAFEHDIQALGTQV
KQLQEDAARLQSAYAGDKADDIQRREGEVLEAWRSLLEACDGRRVRLLDTGDKFRFISMV
RDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIEMGKSLLAR
KHYASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYL
GGREMGQSVDDVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERRRKP
PTPEPVVQDGETQREGEQVTQNGLPSDQDSPRDGVDGGEIVNGVAERSSKEPSPLPSPTS
GRRGKGSQASTLPAKGQDSPAAQLEGFLHRKHEWEGQNKKASNRSWHNVYCVINNQEMGF
YKDNKNAGQGIPYHNEIPVSLREAVCEVATDYKKKKHVFKLKVTDGNEYLFQAKDDEEMN
TWIQAIQIANMGSASSETKSELTPSNQSTPASSRAHTLPATVTLTTESSPGKREKDKEKD
KEKRFSLFSKKKQ
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtggcggccgagctggaccacatggagctgcagcagcagtacgtgggcgac
accgtcaacaaccgctgggacgacgagtgggacaacgagaacagctccgcccggctgttc
gagcgctcgcgcatcaaggccctcgccgatgagcgtgaggcggtgcagaagaagactttc
accaaatgggtaaactcccacctgtcgcgcatgtcctgccgcatcaccgacctctacatg
gacctgagggacgggcgcatgctcatcaagctgctggaggtgctctccggagagaaactg
cccaagcccaccaaaggccgcatgcgtatccactgcctggagaatgtggacaaggccctg
cagttcctcaaggaacagagggttcacctggagaacatggggtcccatgacatcgtcgat
ggcaaccaccgcctcacactcggtctcatctggaccatcatcctccgcttccagatccag
gacatcagcgtggaaacggaggacaacaaggagaaacgttcagccaaggatgctctgctc
ctttggtgtcagatgaagaccgcaggctacaccaatgtcaacattcgcaacttcaccacg
agctggcgggatggaatggctttcaacgccatcctccataagcacaggccggatctcatt
gacttcgacaagctgaagaagtccaacgtccaccacaacctgcagaatgcgttcaacctg
gccgagcagcacctgggcctgaccaagctactggaccccgaggatatcagcgtggaccac
ccggacgagaagtccatcatcacctacgtcgtcacatactatcactacttctccaagatg
aaggccctgaaggtcgaaggcaagcgtgttggcaaggtgctcgaccacgccattgagaca
gagaagatgattgacaagtacgagtctctggcctcagacctgctggagtggatcgagcag
accgtcatcattctcaacaaccgcaagttcgccaactcactggtgggagtccagcaacag
ctacaggctttcaacacttaccgcaccgtggagaagcccccaaagttcacagaaaaagga
aacctggaggtgctgctcttcaccatccagagcaagatgagggccaacaaccagaaagtc
tacatgccacgagagggcaagctcatctccgacatcaacaagacctgggagcgtctggag
aaggcggagcatgagcgtgagttggccctgagaatggagctgattcgccaggagaagctg
gagcagctcgcccgccgcttcgaccgcaaggcagccatgagagagacctggctgagtgag
aaccagcgcctcgtctcacaggacaacttcgggttcgacctgcaggcggtggaggcggcc
actaagaagcacgaggccatcgagaccgacatcggcgcttacgaggagcgcgtgcaggcg
gtgttcgccgtggcgagggagctggaggtggagaactaccacgacctcaagcgcatcaac
gctcgccgcgacaacgtgcagcgcctgtgggagtacctgctggagctgctgaaggcgcgt
cgtcaccgcctggagatgaacctgggcctgcagagggtcttccaggagatgctctacatc
atggactggatggacgagatgaagatgctgctgctgtcccaggactatggcaagcacctg
ctgggagtggaggacctgatgcagaagcacgctctggtggaggccgacatcggcatccag
gccgaccgcgtcaaggccgtcaacaacaacgcacagaagttcgcagtggatgaggaggcg
ggctataagccgtgcgacccgcaggtgatccgagaccgcgtgtcccacatggagttctgc
taccaggagctgatccagctggctgccgaaaggagggcccgtctggaggagtcgcgccgc
ctgtggaagttcttctgggagatggccgaggaggagggctggatgcgcgagaaggagcag
atcctgtcgtcggacgactgcggcaaggacctgacgggcgccgtgcggctcctcagccag
caccgcgccctggaggacgagatgagcggacgggcgaccaagctccacgccacggctcag
gagggagatgacatggccgacgccgggcactttggcgccgaccggctccgggaacgtggc
gcagaggtgcgggcgcagtgggccgccctggaggcgctggcggcggcacgcaaggcgagg
ctcgaggaagcgtgcgccctgcaccagttcctggtggacgcggacgacgccgacgcctgg
acgctggatgcgctgcgcgtggtctccagcggcgacctgggccacgacgagttctcgacg
cgcgcgctcgccaagaagcacaaggacgccgccgaagaggtggccagctaccggcccgcg
ctcgacgcgctccacgagcaagcccgggccctgccgccgcgcgacgcagactccgaggaa
gtcaaggggcgcctggtgggcatcgaggagcgctacgccgaggtggtggagctgacgcgg
ctgcgtaagcaggcgctgaacgacgcgctggccttctacaagatgctgagcgaggccgag
gcctgcgaggtgtggatcgacgagaagcaacagtggctcgaccacatggagatccccgag
aagctggaggacctggaggtcatccaacacaggtttgagagcctcgagcctgagacgaac
aaccaggcctctcgcatcgccgtggtcaaccagatcgccaggcagctgatccacaacggg
cacccgagcgagaatgacatcaaagcccagcaagaaaagctcaacaccaggtggagccag
ttccgcgagctcgttgaccgcaagaaggagttacttcagtctgccctgggcgtgcagaac
taccacctggactgcaacgagaccaagtcctggatccgggagaagaccaaggtgatcgag
tccacccaggagctgggcaacgacctgacgggcgtcatggccttgcagcgcaagctgacg
ggcatggagcgcgacctggccgccatcgaggacaagctgggcgacctgaagggcgaagcg
gcccgcctgggcgaggagcacccggaccaggccagcgccatcacgggccagctggaggag
atcgccgccgtgtgggaggagatgaaggagacgctgcgtgcccgcgaggagtcgctcggc
gaggcgtccaagctgcagggcttcctgcgcgacctggacgacttccaggcgtggctgtca
cgcacgcagacggccatcgcgtccgaggacatgcccaacaccctcgccgaggccgagaag
ctgctggcgcagcacgaggccatcaagaacgagatccgcaactacgaggaggactaccag
aagatgcgcgacatgggcgagatggtgacgcagggccagaccgacgcccagtacatgttc
ctcaggcagaggctgcaggcgctcgacaccggctggaacgagctgcacaagatgtgggag
aaccggcagaacttcctgtcccagtcccacgcctaccagttgttcatcagggacaccaag
caggccgaggccttcctcaacaaccaggagtacgttctggcccacacggagatgcccacc
accctggagggcgcggagggggccatcaagaagcaggaggactttatgaccaccatggat
gccaacgaggacaagatcaacggcgtggtggaggccggcaggaggctggccggcgacggg
aacatcaacgccgagaagatccaggagagggtcgactccatcgacgacaggcataagaag
aaccgtgaggccgctgtggagctgttgatgagactgaaggacaaccgagacctgcagaag
ttcctacaggactgccaggagctcaatctgtggatcaacgagaagatgctgacggcccag
gacatgtcttacgacgaggcccgtaacctccacagcaagtggctcaaacaccaggccttc
atggctgagctgcagtccaacaaggagtggctggacaagatcgagaaggaggggaagcag
ctggtgtcggagaagcccgagacggacgcggtggtgaaggagaagctgggcatgctgcag
aagcagtgggaggacctggagtctaccacgcagaccaaggcgcagtgcctgttcgacgcc
aacaaggccgagctgttcactcagagctgcgccgacctggacaagtggctggccggcctg
gagggccagatccagtcggacgactacggcaaggacctgaccagcgtcaacatcctgctc
aagaagcaacagatgctggagagccaggtggaggtgcgtcagcgcgaggtgggggagctg
cagtcccaggcgcacgccctgagcgaggagggccgcgacacggaggaggtggacggccag
cggcaggtggtggagtgcaagttccaggagctgctggatccgctgcgcaagaggaagaac
ctgctcatggcctcgcgcgagatccaccagttcaaccgcgacgtggaggatgagattctc
tgggcagatgagaggatgcccatcgccatgtccactgatcatggacacaacctacagaca
gtccaactactcatcaagaagaaccagaccctccagaaggagatccagggccaccagccg
cgcttcgacgacatcttcgagcgcagccagagcctggagggcgacgagagccccggggcc
gaggccatccgcgtgcgcctggacgacctgcagggcctgtggggtcagctgaaggaggag
acggagaagaggcacggccgcctggaggaggctcacaaggcccagcagtactacttcgac
gccgcagaggccgaggcctggatgagcgagcaggagctgtacatgatgtcggaggagaag
gctaaggacgagcagtgttcggtggccatgctgaagaagcaccagattctggagcaggcg
gtggaggactacgcagaggccgtccaccagctgtccaagaccagcaggggactgacggca
gcaggacacccagaaagtgagaggataggtatgcgtcagtcgcaggtggataagttgtac
gcgggattgaaagacttgtcagaggaaaggagggggaagttggacgagaggttccgtttg
ttccagctcaaccgtgaggtggacgatctggagcagtggatcgcagagagggaggtggtg
gccgggtcgcacgagctgggacaggactatgagcatgtgacgatgttgcaggagcgcttc
cgggagttcgcccgcgacacgggcaccatcgggcaggagcgcgtggacagcgtcaaccgc
atggcggacgagctgatcaacgcggggcacaccgacgccgccacggtggcggagtggaag
gacgggctgaacgaggcgtgggcggacctgctggagctgatcgacacgcgcacgcagatc
ctggccgcctcgtacgagctgcacaagttctaccacgacgccaaggagatcctgggccgc
gtgctggacaagcacaagcgcctgcccgaggagctgggccgcgaccagaacaccgtggac
acgctgcagcgcatgcacacggccttcgagcacgacatccaggccctgggcacgcaggtg
aagcagcttcaggaggacgcggcgcgtctgcagtcggcctacgccggcgacaaggccgac
gacatccagcggcgcgagggcgaggtgctggaggcgtggcggagccttctggaagcctgt
gacgggcggcgcgtgcgcctgctcgacaccggcgacaagttccgcttcataagcatggtg
cgcgacctcatgctgtggatggaggacgtcatccgcctcatcgaggcccaggagaagccc
agggatgtctcctctgtggagctcctgatgaacaaccaccagggcatcaaggccgagatc
gacgcccgcaacgacagcttcaccgcctgcattgagatgggcaagtccctgctggcacga
aagcactacgcatcagaagagattaaagaaaagttgctacagttgacagacaagaggaaa
gacatgattgacaaatgggaggacagatgggagtggctaagactgattttggaggtgcac
cagttctcccgtgacgcgggggtggctgaggcctggctgctgggccaggagccgtacctt
ggcggtcgtgagatgggccagagcgtggacgacgtggagaagctcatcaagcgccacgag
gccttcgagaagtctgccgccacctgggaggagcgcttctccgcgctcgagagactgacg
acgctggaattactggaagtgagaagacagcaagaggaggaagagagaaggagaaaaccc
ccgacgcccgagccagtggttcaggacggagagacgcagagggaaggagagcaagtaact
cagaacggactgccatcggatcaggattcaccaagggacggagtggacggaggagagata
gtgaacggcgtggctgagcggagctccaaggagcccagtcccctcccgtcgcccacctct
ggcaggcggggcaagggcagccaggcctccaccctgccggctaaaggccaggactcgccc
gccgcccagctggagggcttcctgcaccgcaagcatgagtgggaaggccagaacaagaag
gcctccaacaggtcttggcataacgtgtactgcgtgatcaacaaccaggagatgggcttc
tacaaggacaacaagaatgcaggccagggcatcccataccacaacgagatccccgtcagc
ctgagggaggcagtgtgcgaggtggccaccgactacaagaagaagaagcacgtcttcaaa
ctcaaggttacggatggtaacgagtatctcttccaagccaaagacgatgaggagatgaac
acatggatccaggccatccagattgccaacatgggctccgcctcctccgagaccaagtcg
gagctcacgcccagcaaccagagcaccccggcatccagccgcgctcacacactgccggcg
accgtaaccctgacaacggagtcgagcccgggcaagcgagaaaaagacaaggagaaggac
aaagaaaaacgcttcagcctcttcagcaagaagaaacagtag
DBGET
integrated database retrieval system
