Clupea harengus (Atlantic herring): 105896843
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Entry
105896843 CDS
T09045
Symbol
vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
105896843 (vti1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105896843 (vti1b)
Membrane trafficking [BR:
char04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
105896843 (vti1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
DUF922
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
105896843
NCBI-ProteinID:
XP_012679099
Ensembl:
ENSCHAG00000018067
UniProt:
A0A6P3VRK8
LinkDB
All DBs
Position
14:21452966..21456389
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AA seq
231 aa
AA seq
DB search
MDTGIMSSEEFEKLHEIYTSLYEELQLIPQQILRCHGEERKRLVRVFDERIGEAEEVLQS
MDRELIGAPSSFRNPMSTKVRMYRRDLGKLQRDVRSSDQGSGLAVRPGESRQGIYATQND
HSTHLQSQRAMLIQGTSSLNNATASIERSQRLAAETDQIGNEIIEELGEQREQLDRTRDR
MVHTGENLSRSRKILRSMSRRLVTNKLLLSVVIVMELAILGAVVYLKFFRK
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggacactggaataatgtcatcagaggagtttgaaaagttacatgagatttacacatct
ctgtatgaagaactccagctgatacctcagcagatcttgcgatgtcacggagaagagaga
aagcggttggtgcgagtcttcgatgagaggattggggaagcagaagaagttctgcaaagt
atggaccgggaactcatcggagctccatcctccttccgaaacccaatgagcaccaaggtc
cggatgtataggagggacctgggcaagctgcagcgagatgtccggagctcagatcagggt
tctggcctggcagtccgccctggagagagcaggcagggcatctatgccactcagaatgac
catagtactcacctgcaatcacagcgggccatgctcatccagggcacatcatctcttaac
aacgccacagccagcattgagcgcagccagcgacttgctgcagaaacagaccagattggt
aatgaaatcattgaggagctgggtgagcagagagagcaattggaccgcacacgtgaccgg
atggttcatactggagagaacttgagcagaagtcgaaaaatcctccgctcaatgtccaga
cggcttgtaaccaacaaactgcttctgtcggtcgtcatcgtaatggagctggccattctg
ggggctgttgtgtacctgaagttcttccgtaaatag
DBGET
integrated database retrieval system
