Clupea harengus (Atlantic herring): 105896863
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Entry
105896863 CDS
T09045
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105896863 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105896863 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105896863 (usp30)
04121 Ubiquitin system [BR:
char04121
]
105896863 (usp30)
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105896863 (usp30)
Peptidases and inhibitors [BR:
char01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105896863 (usp30)
Membrane trafficking [BR:
char04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
105896863 (usp30)
Ubiquitin system [BR:
char04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105896863 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF4636
DUF5700
Motif
Other DBs
NCBI-GeneID:
105896863
NCBI-ProteinID:
XP_031425906
Ensembl:
ENSCHAG00000009019
UniProt:
A0A6P8FQT4
LinkDB
All DBs
Position
7:369056..385766
Genome browser
AA seq
463 aa
AA seq
DB search
MLKSWGLIGGIVAAMAAGVYVLWGPISDKKKMRKGLVPGLLNLGNTCFLNSLLQGLASCP
SFIRWLQEFSGAGQGRLEKANELSTTLVQLLKALSSHNPVEDDVLDAGCLLDVLRLHRWQ
ISLFEEQDAHELFHVLTSSLEEERDHHTAVIHLFDMQSLESSSESRENSLSCRGRGPLHS
MPSLWRNQHPFHGRLMSYMACKHCKQQSPVRFDSFDSLSLTIPSAQLGRPVTLDQCLQHF
ISSETIREVECVHCTKMQAAESLNGHVGENQRTTFIKQLKLGKLPQCLCIHLQRLTWSSE
GTPIKRQEHVQFTEYLSMDRYKHTASPSSLQQTNSTAQSVHPQSSGIEYCDIKPVSTGRF
PSVFLQSPTLSHPFNSAHDYYRSSEYLFRLTAVLVHHGDMHSGHFVTYRRCPASPRCPSP
FSSQWIWVSDDSVRKASLQEALSSSAYLLFYERVPKPSLPTEE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagagctggggcctcattggtggaatagtggcagctatggcagctggagtttat
gtcctgtgggggccaatttcagacaagaagaagatgagaaaaggtttggtgcctggcttg
ctgaacttggggaatacttgcttcctgaactctttgcttcaaggcttggcatcctgtcct
tccttcataagatggcttcaggagttctcaggcgcagggcagggcaggcttgagaaggcc
aatgagctgtccacaactttggtgcaactactcaaagctctgtccagccataaccctgta
gaggatgatgttttggatgcggggtgcctcctggatgtcctaagactccacagatggcaa
atcagtttatttgaagaacaggatgctcacgagctcttccatgtcctcacctcctcattg
gaggaggagcgtgaccaccacaccgcggtcatccacctgtttgatatgcaatctctggag
agttcctctgagtcaagagaaaacagtttatcctgcagaggtcgaggaccgttgcattcc
atgccaagtctgtggaggaaccagcacccttttcatggccgcctgatgagttatatggct
tgcaagcattgcaaacaacagagcccagttcgatttgactcgtttgacagcctttcactc
actatcccctctgcacaattgggacgacctgtcactttagaccagtgtctgcaacatttc
atttcatcagagaccatcagagaggtggaatgtgttcattgcacaaagatgcaggcagca
gagtctttgaatggacatgttggtgaaaatcagaggacaactttcattaagcaactgaaa
cttggcaagctcccccagtgcctgtgcatccacctgcagaggttaacctggtccagcgag
ggcacccccatcaagaggcaggagcacgtccagttcacagagtatctgtccatggatcgc
tacaagcacaccgcctctccttcgagcctgcagcagactaactccaccgcccagtctgtt
catccccagagcagtggtatagaatactgcgacatcaagcctgtttccaccggacgcttt
ccttcagtttttctgcagtctcctaccttaagccatcctttcaactcagcacatgactac
tacaggagttcagagtacctcttcagattgacagcggtgctggttcaccatggggatatg
cactctggacactttgttacctacagacgttgtccagcttctccccgatgcccctctcca
ttcagctctcagtggatatgggtgtctgatgacagtgtccgtaaggccagcctacaagag
gctctgtcatcaagtgcttatcttctcttctatgaaagggtccctaagcctagcctccct
acggaagagtag
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