Clupea harengus (Atlantic herring): 105896994
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Entry
105896994 CDS
T09045
Name
(RefSeq) grainyhead-like protein 1 homolog
KO
K09275
transcription factor CP2 and related proteins
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105896994
Transcription factors [BR:
char03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Grainyhead
105896994
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GFIT
Motif
Pfam:
CP2
Motif
Other DBs
NCBI-GeneID:
105896994
NCBI-ProteinID:
XP_031437668
UniProt:
A0A6P8GEY1
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Position
15:814929..827707
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AA seq
595 aa
AA seq
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MTQEYGKERTVLVLHGEAPAGGAQRQQVFVDEDEAWRSFLENPLTAASKAMMSINGDEDS
AAALSLLYDYYKVPKEKMVKTVKIEADSDCSLTELGTFQKPSQSMASLRTVPLSGIPQLS
LANWEKGSAYHPFDSPTGSTYLRSQEGASQSLPVGGPAAQGSRSEAAAFLRQFSPSYSLR
VQAQTPDSTYTEGLSGTSEEVFPLSDELHSHLPSISPGSYSHISKPGSQQYEYTVEAPRS
MSQKSGVMSYLNKGHFYPISLRCQSGSMAEPQTSTTVRSVVMVVFHEKCVDEQLKSWKFW
HSRQPSAKQRCIDIADYKESASTVANIEDISFNAISFTWNTKDEPRIYVSVNCLSTDFSP
QKGVKGLPLNLQIDTYSCSNHGDQLLLHRAYGQIKVFCDKGAERKIRDEERKVMRRKGRG
QDGSNTRTGSKGAVQQSHVDITVFKSMSDMATQPVLFIPEALFATTQRHGSPVEEGRQSV
AVRRSPYSAEEFGCTPSKRARRDEPERVLLYVRQETDEVFDALLLRTPTLLGLLQAISDK
YKLPVEKVLNVYKKCKKGIIVKMDDNIVKHYSNEDTFQMDLKEERGTFSLMLTEI
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgactcaggagtacggcaaagagaggacggtcctggtgctccatggggaggccccggca
ggcggagcccagcggcagcaggtgtttgtggacgaggacgaggcctggaggtccttcctg
gagaatccactgactgctgcgtccaaggccatgatgagcatcaatggggatgaggacagt
gcagctgccctcagccttctctacgactactataaggtgccaaaggagaagatggtcaaa
actgtgaagatagaagcagacagtgattgcagtctgacagaactgggaacctttcaaaaa
ccctctcagtcgatggcctctctcaggacggtccccctcagtggcatcccccagctcagc
cttgccaactgggagaaagggtcggcctatcatcccttcgactccccgacggggagcacc
tacctgcggagccaggagggggcgtcccagtccctgcctgtagggggccctgctgctcag
gggtcccggtcggaggctgcagcgttcctccgccagtttagccccagctacagcctccga
gtgcaggcccagacaccagactccacctacacagagggcctcagtgggacttcagaggag
gtgttccccctctctgacgagctgcattcacacctcccctccatctctcccgggagctac
tctcacatcagtaagcctggcagtcagcagtatgagtacacagtggaggcccctcgctca
atgtctcagaagagtggtgtgatgagctacctcaacaagggccacttctaccccatcagc
ctgcgctgtcagagtggctccatggccgagccccagaccagcactactgtgagaagtgtg
gtgatggtggtgttccatgagaagtgtgtggacgagcagctcaagtcgtggaagttctgg
cacagcagacagccctcagccaaacagcgctgtatcgacatcgcggactacaaggagagc
gccagcactgtggccaatattgaggacatttccttcaatgccatttcattcacgtggaac
accaaggatgagcccagaatatatgtctcagtgaactgtctaagcacagacttctccccc
cagaaaggggtgaagggcctccccctcaacctgcagattgacacctacagctgcagtaac
cacggcgaccagctcctgctgcaccgtgcctacggccagattaaggtattctgcgacaag
ggggctgagcgcaagatccgtgacgaggaacgcaaggtgatgcgccgcaagggacgtggt
caggacggtagcaacacaaggacaggtagcaaaggcgccgtgcagcagagccatgttgac
ataacagtcttcaagtccatgagcgacatggccacacagccggtcctgttcatcccagag
gcgctttttgccacgactcagcgacatggcagtcctgtggaggagggacgccaaagtgtg
gcagtgaggcgatcgccctactcagcagaggagtttggctgcactcccagcaagagagcc
aggcgcgacgaacccgagagagtgctgctgtacgtgcgtcaggagacagacgaggtgttt
gatgctttgctgctgcggacgcccactctgctcggcctgctgcaagcgatttcagacaaa
tacaagctgccggtggaaaaagtgttgaatgtttacaagaaatgcaaaaaagggattatt
gtaaaaatggacgacaacatagtgaaacactattccaacgaagacacattccagatggac
ttaaaggaggagaggggcacgttctccctgatgctgacggagatctga
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