KEGG   Clupea harengus (Atlantic herring): 105897000
Entry
105897000         CDS       T09045                                 
Name
(RefSeq) claudin-20
  KO
K06087  claudin
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03272  Virion - Hepatitis viruses
char04382  Cornified envelope formation
char04514  Cell adhesion molecule (CAM) interaction
char04530  Tight junction
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    105897000
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    105897000
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    105897000
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    105897000
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:char03037]
    105897000
   04147 Exosome [BR:char04147]
    105897000
Cilium and associated proteins [BR:char03037]
 Other cilia and associated proteins
  Stereociliary proteins
   105897000
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   105897000
  Exosomal proteins of colorectal cancer cells
   105897000
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 TMEM_230_134
Other DBs
NCBI-GeneID: 105897000
NCBI-ProteinID: XP_012679294
UniProt: A0A6P8GR55
LinkDB
Position
15:complement(1001777..1003265)
AA seq 297 aa
MLSSALQILAFALALLGIFGATVATLLPNWKVSAEQGPNIITAISQMQGLWMDCTWWSTG
VFSCTLKYSVLALPAYLQTARTTMVLSCMMATLGLCLAALGLKCTRWGGSHRSKGHTAIA
AGACFVVSGVLCLVPASWFTKEVITNFLDARVPESSKFEPGGAVYVAFVSAGFFLASGVI
FCLSCPGKREGPLDSGSSYPGKALQKQPHHEQVNREQQTQPPDPREEQHPQPPPLPVPNK
EKANPEKPIHTDELPPPQQPLPPDKLLQEQEQAYYSPSRSRPPPPDIKKGYSLQDYV
NT seq 894 nt   +upstreamnt  +downstreamnt
atgctctcctccgccctccagatcttggcgttcgccctggcgctgctgggcatcttcggg
gcgaccgtggccacgctgctgcccaactggaaggtgagtgccgagcagggccccaacatc
atcacagccatctcgcagatgcaggggctatggatggactgcacctggtggagcacgggg
gtgttcagctgcacgctcaagtactccgtgctggctctgcccgcgtacttgcagacggcg
aggaccaccatggtgctctcctgcatgatggcaaccttgggactctgcctggctgccctg
ggactgaagtgcacccgctggggggggagtcaccgctccaaggggcacacagccatcgct
gccggggcttgcttcgtggtgtccggggtgctgtgcctggtgcctgcctcgtggttcacc
aaagaggtcatcaccaatttcctggatgcccgcgtgccggaaagcagcaagttcgagccc
gggggcgccgtctacgttgcctttgtgtcggcaggattcttcctggcatcaggggtgatc
ttctgcctgtcttgccccgggaagagagaggggccgctggactcggggtcctcctaccct
ggcaaggcgctccagaagcagccgcaccacgagcaggtgaaccgcgagcagcagacgcag
ccgcccgacccgcgggaggagcagcaccctcagcccccgcccctaccggtgccaaacaag
gagaaagccaacccggagaagccgatccacacggacgagctgcctccaccacagcagccg
ctgcctccagacaagctcctccaggagcaggagcaggcatactactccccatcccgctcc
cgacccccaccccctgacatcaagaaaggctacagcctacaagactatgtgtaa

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