Clupea harengus (Atlantic herring): 105897000
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Entry
105897000 CDS
T09045
Name
(RefSeq) claudin-20
KO
K06087
claudin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03272
Virion - Hepatitis viruses
char04382
Cornified envelope formation
char04514
Cell adhesion molecule (CAM) interaction
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
105897000
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
105897000
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105897000
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105897000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105897000
04147 Exosome [BR:
char04147
]
105897000
Cilium and associated proteins [BR:
char03037
]
Other cilia and associated proteins
Stereociliary proteins
105897000
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
105897000
Exosomal proteins of colorectal cancer cells
105897000
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM_230_134
Motif
Other DBs
NCBI-GeneID:
105897000
NCBI-ProteinID:
XP_012679294
UniProt:
A0A6P8GR55
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Position
15:complement(1001777..1003265)
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AA seq
297 aa
AA seq
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MLSSALQILAFALALLGIFGATVATLLPNWKVSAEQGPNIITAISQMQGLWMDCTWWSTG
VFSCTLKYSVLALPAYLQTARTTMVLSCMMATLGLCLAALGLKCTRWGGSHRSKGHTAIA
AGACFVVSGVLCLVPASWFTKEVITNFLDARVPESSKFEPGGAVYVAFVSAGFFLASGVI
FCLSCPGKREGPLDSGSSYPGKALQKQPHHEQVNREQQTQPPDPREEQHPQPPPLPVPNK
EKANPEKPIHTDELPPPQQPLPPDKLLQEQEQAYYSPSRSRPPPPDIKKGYSLQDYV
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctctcctccgccctccagatcttggcgttcgccctggcgctgctgggcatcttcggg
gcgaccgtggccacgctgctgcccaactggaaggtgagtgccgagcagggccccaacatc
atcacagccatctcgcagatgcaggggctatggatggactgcacctggtggagcacgggg
gtgttcagctgcacgctcaagtactccgtgctggctctgcccgcgtacttgcagacggcg
aggaccaccatggtgctctcctgcatgatggcaaccttgggactctgcctggctgccctg
ggactgaagtgcacccgctggggggggagtcaccgctccaaggggcacacagccatcgct
gccggggcttgcttcgtggtgtccggggtgctgtgcctggtgcctgcctcgtggttcacc
aaagaggtcatcaccaatttcctggatgcccgcgtgccggaaagcagcaagttcgagccc
gggggcgccgtctacgttgcctttgtgtcggcaggattcttcctggcatcaggggtgatc
ttctgcctgtcttgccccgggaagagagaggggccgctggactcggggtcctcctaccct
ggcaaggcgctccagaagcagccgcaccacgagcaggtgaaccgcgagcagcagacgcag
ccgcccgacccgcgggaggagcagcaccctcagcccccgcccctaccggtgccaaacaag
gagaaagccaacccggagaagccgatccacacggacgagctgcctccaccacagcagccg
ctgcctccagacaagctcctccaggagcaggagcaggcatactactccccatcccgctcc
cgacccccaccccctgacatcaagaaaggctacagcctacaagactatgtgtaa
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