Clupea harengus (Atlantic herring): 105897002
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Entry
105897002 CDS
T09045
Symbol
pax1b
Name
(RefSeq) paired box protein Pax-1
KO
K09382
paired box protein 1/9
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105897002 (pax1b)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
105897002 (pax1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_29
Motif
Other DBs
NCBI-GeneID:
105897002
NCBI-ProteinID:
XP_012679296
Ensembl:
ENSCHAG00000012216
UniProt:
A0A6P3VRM9
LinkDB
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Position
15:complement(1188720..1192315)
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AA seq
351 aa
AA seq
DB search
MDQTYGEVNQLGGVFVNGRPLPNAIRARIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKSIREYKISDPGIFAWEIRDRLLADGVCDKYNVPSV
SSISRILRNKIGNMSQPNQYETSKPQPPQIPYNHMYPYSYPNTMSPTGNKLGNAPGVPVG
AGHVSLSRAWSSMHTVSNFLGIRAFMDPSAIAGAEGYQPKLEDWTSMNRATFPSAHAING
IEKSPIEADMKYPQSSSSLSSYVQACAYSPANQYGVYGGNYVTGHPWQSQGGTLSHPNNA
TSMHAPSLHSPMAFKHSSREAGDRKPPSPLSKHQHETLSSVHGLALTTSGS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaacatacggagaagtcaaccagctggggggtgtattcgttaatggccgacct
cttcccaacgctatccgagcaagaatcgtagagttggcccagctcggaataagaccatgt
gatatcagtcgacaactgcgcgtctcgcatggttgtgtgagcaagatcttggcgaggtac
aacgaaactggttcgattttaccaggtgctattggaggaagtaagccccgagtaacaaca
cccaatgtcgtaaaaagcattagggaatacaagatatcggatcctggaatatttgcttgg
gaaatccgtgacagacttcttgcagatggagtttgcgacaaatacaacgttccgtcagtt
agctccattagccgaattctgaggaacaagattggaaatatgtctcaaccgaatcagtat
gaaaccagtaagccacaacctccacagataccgtacaatcatatgtatccctactcatat
cccaatacaatgtcgcctaccgggaacaagctggggaacgcacctggagtgccagtggga
gcagggcatgtcagcctatcacgggcctggtcgtcgatgcacactgttagcaatttttta
ggcatccgggccttcatggatccgtcagctattgctggagctgagggttaccagccgaag
ttagaggactggactagcatgaacagagccacatttccatctgcacacgccatcaatggc
attgaaaagtctcccatagaggcggacatgaaatacccacagtcttcgtctagcctatcc
agttatgttcaagcttgtgcatactctccagccaaccaatacggggtatatggtggtaat
tatgtgactggacacccgtggcagtcccaaggaggtacgctgtctcatcccaacaacgcc
acatccatgcatgcgccaagcctgcactcacctatggccttcaagcactcgtcacgagaa
gctggagacagaaaacctccgagtcctctgagcaagcaccagcacgagacgctgagtagc
gtccacgggctcgcgctcactacctcaggctcctaa
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