Clupea harengus (Atlantic herring): 105897116
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Entry
105897116 CDS
T09045
Symbol
plch1
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 isoform X1
KO
K19006
phosphatidylinositol phospholipase C, eta [EC:
3.1.4.11
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00562
Inositol phosphate metabolism
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
105897116 (plch1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105897116 (plch1)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
105897116 (plch1)
Membrane trafficking [BR:
char04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
105897116 (plch1)
Endocytosis
Macropinocytosis
Phospholipase C
105897116 (plch1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
C2
EF-hand_like
EF-hand_7
PH_12
EF-hand_1
EF-hand_10
EF-hand_6
PH
EF-hand_5
AIF-1
EF-hand_8
EH
Motif
Other DBs
NCBI-GeneID:
105897116
NCBI-ProteinID:
XP_031429587
Ensembl:
ENSCHAG00000016341
UniProt:
A0A6P8G261
LinkDB
All DBs
Position
9:18349927..18389267
Genome browser
AA seq
1827 aa
AA seq
DB search
MELLPEPVQRSAVASAACLLARRIYHIGGSLAIPYKCHLAYSVERCMSVMQSGTQMVKLK
NGSKGLVRLFYLDEHRSCIRWRPSRKSEKAKITIDSLYKVTEGRQSDIFHRHAEGSFDPA
CCFTIYHGNHMESVDLVTANAEEARTWVTGLRYLMAGISDEDSLAKRQRTHDQWMKQTFE
EADKNGDGLLNIDEIYQLLHKMNVNLPRRKVKQMFQEADTDDQQGTLTFEEFSVFYKMMS
LRRDLYLLLMCYSEKKDHLTAEELGNFLRVEQKMPNVTVECCLDIIDKFENSEENKQKGI
LGIEGFTSFMRSPTCDIFNPMHLEVNQDMDQSLCNYFISSSHNTYLTGDQLLSHSKTDMY
AWVLQAGCRCVEVDCWDGPDGEPMVQHGYTLTSKITFKSVVETIDKYAFINNEYPVILSI
ENHCSIQQQKKIAQHLREIFGDKLDVEEAFSKDPKQLPSPNSLRGKILIKGKRLPTHLSA
DAEEGEVSDDDSADEIEDDFKLRNSSSNSIIQRQVESHIRKKLDSLQKESQIGDKEDTDS
FSIGALLRATHEGLHRNLKKNSKETLKKSQSRSFIGNLKHKRNSKSRMKCQSVDVDTDDE
ENEEVYGKELVGVPYRGGRRRRTIKLSRDLSTLVGLTNTLAAQQALDEGAPGNVLSFSET
RAQQLVHHRAEEFLRLNHQQLSRIYPSAYRIDSSNFNPQAYWNVGCQLVALNYQTEGRMM
QLNRAKFMVNGGSGYVLKPPPMCKGSFSPFSNDPLPAYPKKQLLLKIISGQQLPKPPDSM
MGDRGEIIDPFVEVEIIGLPVDCCKEQTRVVDDNGFNPVWEETLSFTLHMPEMALVRFLV
WDHDPIGRDFVGQRTVAFSSLMPGYRHVYLDGLTEASIFVHITVHDVYGKWSPLVLNPSY
TIMHFLGANKNRQLKGIRGLFNKGSKASVENGLPMRKRSLSDHLLRRTASAPAKGRRKTK
MALAEAAEDRKNSTGEALQAQEVALDRRTSPRAPLQHRPVSMPLEKLLQGQLSLASPDQG
KPDPITDTLIDLVHFARPRSISVDLLIETTPSYNSDDHSSSVGKIPGADEMSNTAYLVIG
EGEKNVDDPNTAPSSLDRVSHKPNAKEVPTPCCSSPAPGSSSASQVSSPVHHKTSLSSPS
PLAVDQYDQQSQLSLQDSTISRLIDAVSLGNEYDTCGSISALIGQFELTMEHGTPKTESG
QSIYGPSLYSVTPNSHRISHKHNKSNTIKTTDASSSPLKAIPNSQKHASPKKVLRNTSSP
STVPFYSEPLLLSSPETTEPAVYTILDEEVLSPVSLSNQRDESFGVEKNFRKNAHGCTLD
SFPSKQEIGVNLEDTDCWGENREDGQRGQYTTKRSVHAWQANGYTTSASTGPNPDHFVFC
HESAGSSLMEVELNVDEDPLETTQFSPRHGYGWNGRGLNNTISAGIHNAHYTSSLHDRLS
NEPSPLHQPTLQPPPSHRHAGQPFQLDQRQSFSNLCQDRYQISNARTDPNHHNINDRTLS
GRHWRDTYSGYTTNGRQGMPQKTDDHDERAGHFHNGNLSEYLSEPQRHNSTMGRDLYSPI
SDCDVPYNYTENGFVSTKYSQHTQAAPPHMEHSLAAPGVTKGPSPCKSKSLGDLTSDDIS
CNFQSKYQVISRSFITSSRDNRRMASLNQRPQSADPLTEQLRKLVTLEQEELPQSSLSNQ
IPPKPLPTSLPSLNPFPVSSAEAADDLEDPPPLLTRRLSSRSQSRVRHIASRAREKQEAL
KSRTAANSNRVVLRHKSPSSQNPLPNRHSTGSYIAGYLEQLEDRGLPEGACTSLRYSYGD
HYYTDDSALLSDSCLPSEPEVYFLLRL
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggagctgttgcctgagcctgtgcagcggtcagctgtggcctcggctgcctgtctgctt
gccaggagaatctaccacattggcggcagcctggccataccatacaaatgtcatctagca
tattcagtcgagcgatgtatgagtgtcatgcagtctggcactcagatggtcaagctcaag
aatggttctaaaggcctggtccgtctgttctacctggacgagcatcgctcctgcatcaga
tggaggccttccagaaagagcgagaaggccaagatcactatcgactccctctacaaggtc
acagaggggcgccagtccgacatcttccaccgccatgccgaaggaagcttcgatcctgcc
tgttgcttcaccatttaccacggaaaccacatggaatctgttgacctggttaccgccaat
gcagaggaagcccgtacctgggtgaccggtctgagatacctgatggcaggcattagcgac
gaggactcactggccaagagacaacgcacccatgaccaatggatgaagcaaacatttgag
gaagccgataagaatggcgatggccttctgaacattgatgagatctaccagctcctacac
aaaatgaacgtgaacctgcctcgtaggaaagtcaagcagatgtttcaggaagcagacaca
gatgaccaacagggcacactcacattcgaggagttcagcgtcttttataagatgatgtcc
ctacgccgtgacctgtacctactgctcatgtgctacagtgagaagaaagaccacctcaca
gcagaggagctgggcaacttcctacgtgtggagcaaaagatgccaaatgtgacagtggag
tgctgcctggacatcattgataaatttgaaaactcagaggagaataagcagaaaggaatt
ttagggattgaagggtttaccagttttatgcgcagtccaacatgtgacatatttaatccc
atgcatctcgaggtgaaccaggatatggatcagtcgctgtgtaactacttcatctcgtcc
tcccacaacacctacttgactggagaccagctcctctctcactccaagacggacatgtat
gcctgggtgctgcaggctggctgccgctgtgtggaggtggactgctgggatggcccagac
ggagagcccatggtccagcatggctatactctcacttctaagatcaccttcaagtctgtt
gtagagacaatcgacaagtatgcctttatcaacaatgagtacccagtcatcctgtcgata
gagaaccactgtagtatccagcagcaaaagaagattgcccagcacctgagggaaatcttt
ggggacaagctggatgttgaggaggctttcagtaaagacccaaagcagcttcccagcccc
aacagcctgcggggcaagatccttataaagggtaagcgtctgcccacacatctgtcagcc
gatgcagaagagggggaagtgtcagatgatgacagcgccgatgagattgaggacgacttc
aaactgagaaacagctccagcaacagcataatccaacgccaggtggaatcccacatcagg
aagaagcttgattctctgcagaaggagtcacagatcggggacaaagaggacacagacagc
ttctccatcggggccctgctgcgtgccacacacgagggactccacagaaacctcaaaaag
aactccaaagaaaccctgaagaaatcccagagtcggtctttcattggcaacctcaaacac
aagagaaattccaagtccaggatgaagtgtcagagtgtggatgtggacacagatgatgaa
gagaatgaggaggtctacggaaaggagttagttggcgtgccttacagaggtggccggcgg
aggaggactataaagctgagtagagatctgtctactctggtgggactcaccaacactctg
gccgcacaacaagctctggatgagggtgccccagggaatgtgctgtcattcagtgagaca
agggcacagcagctggtccaccaccgagcggaagagttcctccgtctgaaccaccagcag
ctctctcgcatctatccatctgcctaccgtatcgactccagcaacttcaacccgcaggcc
tactggaatgtgggctgccagctagtggctctgaactaccagacagaaggtcgtatgatg
cagttaaaccgagccaagttcatggtgaatggtggcagtggctatgtgctgaaacctcca
ccaatgtgcaaaggatccttcagtccattttctaatgatccacttccagcatatcccaaa
aagcaactattgcttaagatcattagcggacaacagctccccaagccacctgactccatg
atgggggaccggggagagatcattgacccttttgtggaggtggagatcattggtcttcca
gtggattgctgtaaagagcagacacgtgtggtggatgataatgggtttaacccagtatgg
gaggagactctgtcctttactctacacatgccagagatggcattggtgcgattccttgtc
tgggaccacgacccaattggacgagactttgtcggtcagagaaccgtggcattcagcagc
cttatgccaggttacagacatgtttacctggacggtctgacagaagcatccatctttgtc
catatcacagtgcatgatgtttacggaaagtggagtcccctagtcctcaaccccagctat
acaataatgcactttctaggagctaataagaaccgtcagctgaaaggcatcagaggccta
tttaataagggctcaaaggcatcagttgagaacggactccccatgcgaaagcgttccctt
agcgatcacctcttgcggcgcacagccagcgcccctgccaagggccgaaggaagaccaaa
atggctctcgctgaggctgcagaggaccggaagaatagcaccggcgaagctttacaagcg
caggaagtggcgttggaccgtcgtaccagtcctcgagctcctctccaacacaggccagtc
tccatgcccttggaaaagctgctgcagggccagctcagcctggcgtccccagaccagggg
aagcctgacccaatcacagacactctcatcgatctggtccactttgcacgccccaggtcc
atctcagtggacctcctcattgaaaccacaccctcatataattctgacgaccattcctcc
tctgttggcaagatcccaggagcagatgagatgagtaatactgcctatctggtaattgga
gaaggagagaaaaatgtagatgatcccaacacagccccttcttcactggaccgtgtcagt
cacaagcccaatgctaaggaagtgccaactccatgctgctcttcgcctgcaccaggcagc
agttcagcatcccaggtttcaagcccagtacatcacaaaacatctctttcttcgccttca
cctcttgcagtggaccagtatgatcagcaaagtcagctatctcttcaggacagtaccatc
tcaaggcttattgatgctgtttccctgggcaatgagtacgacacttgtgggtcaatatcg
gccttgattggtcagtttgaactcacaatggaacatgggacccctaaaacagaatcagga
caatcaatctatggcccctctctctacagtgtaactccaaactcacatagaatatcccac
aaacacaataaaagtaacactatcaaaaccacagatgcttcaagcagtcctctcaaagct
atcccaaactcacaaaaacatgcttcccctaagaaagtcctccggaacactagtagtcca
tccacagttccattctattctgagcctttacttctctcaagtccagagaccacagaacct
gcagtgtacaccattcttgatgaggaagtgctgtccccggtttctctaagtaaccaaagg
gatgagtcctttggtgttgagaagaacttccgaaagaatgcacatggttgcaccttggat
tctttcccttctaaacaggaaatcggtgtgaatcttgaagacactgattgctggggggaa
aacagggaggatggccaaagaggccagtataccactaagagatcagtgcatgcctggcaa
gcaaatggctacaccacctcagccagcaccggtccaaaccctgaccacttcgtcttctgt
catgagtcagcaggtagtagtctaatggaggtagagctcaatgtcgatgaagatccgctg
gagaccacacagttctctccacgacatggttatggttggaatggccgggggcttaataat
accatatctgctggcatacacaatgcacattacacttcctctctgcatgacagactctca
aatgagccctcacctcttcaccagcccaccctacagccccctccttcacacagacatgct
ggtcagccattccagttagaccagcgtcaaagtttttctaatctgtgccaagatcggtac
caaatcagcaatgcaaggactgaccccaatcaccacaatatcaatgataggaccttatcg
gggaggcattggagggacacttacagtggatatacgactaatggaagacagggaatgcca
caaaaaacagatgatcatgatgagagagccggacactttcataatggaaacctctctgaa
tatctgtctgagccccaaaggcacaactccaccatgggcagggacctgtattcgccaatc
tcagactgtgatgttccctacaattacactgagaatggctttgtctcaaccaaatattct
cagcacacccaggcagcgcccccccacatggagcatagtttagctgcaccaggagtaact
aaaggcccgagcccttgcaagtccaagagtctgggagacctgacgtctgatgacatctcc
tgcaacttccaaagcaagtaccaagttatcagccgcagcttcatcacttcatcccgagac
aacaggagaatggccagcctaaaccagcgacctcaatctgcagaccccttgacagagcag
ctacgcaagctagtgaccttagagcaagaagagctgccccagtcgtccctctccaatcag
atcccacccaagcccttgccaacatccctgccctctctgaatcctttccctgtcagctca
gcggaggctgcggatgatcttgaggatcccccgcctcttctgacccgtcggctgtcctct
cgcagtcagagccgagtgcggcacatcgccagccgcgcccgcgagaagcaggaggcactg
aaatcccgaactgctgccaacagcaaccgagtagttctgcgacacaagtcacccagctca
caaaatcctctgcctaacaggcactccactggctcctacattgcggggtatctcgagcaa
ctggaggaccgaggtttgcctgagggggcctgtactagtctccgatacagttatggtgat
cattactacacagatgactcagcgctcctctctgattcctgtcttccttcagaacctgag
gtctacttcctgctcagactatga
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integrated database retrieval system
