Clupea harengus (Atlantic herring): 105897126
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Entry
105897126 CDS
T09045
Symbol
slitrk3a
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105897126 (slitrk3a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRRCT_2
Motif
Other DBs
NCBI-GeneID:
105897126
NCBI-ProteinID:
XP_012679462
Ensembl:
ENSCHAG00000004141
UniProt:
A0A6P3VRU0
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Position
9:17563327..17570261
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AA seq
870 aa
AA seq
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MLWVTLLSTIALGWTTPIPMLDDSEEVDEPCFDPCYCEVKEGIFHVHCDSKGFTNVSQIS
QSWTRPFKLNLQRNSMRKLYFNSFLHLNNAISLNLGNNALQDIHVGAFNGLSILKKLFLH
ENKLEVFRNDTFLGLESLEYLQADYNVIKRIESGAFRHLHKLRVLILNDNLIPVLPNMLF
RSASLTHLDLRGNRLKILPYKGTLEFIGRTLMEIQLEENPWNCVCEIVQLKTWLERIPYT
ALVGDITCEHPFHLHGKDLREIKQSELCPLLSEAEVEAKLGIPKIPFSNENTWPTKPSSM
LSSFHNTASSVEYKERPVKPTKRPKPTKTPPTPRSIYPGPNQPPMAGYQTRPPIPIICPA
GCICNLHINDLGLTVNCKEKAFHNISELLPRPLNAKKLYLSGNLIQKIYRSDFWNFSSLD
LLHLGNNRISYVQEGAFINLPNLKSLYLNGNDIEKLTPGMFRGLQTLSYLYFEYNVIREI
QPAAFSLMPNLQLVFLNDNLLRTLPVDAFAGTSLARLNLRNNYFLHLPVSGVLEHLHSIV
QIDLHQNPWDCSCDIIPLKQWMEKLSSVIVVGEVICKTPNFVFGKDLRSLDAEVICPELK
FTAPSAASPNDITSTSTFGLGYAPATGAVPLSVLILSLLILFISSVFVAAGLFAFVLRRR
KKLPFRKRQEVDLTGIQMQCRIFEERQTASPEKPPGHVYDYIPHPVTQMCNNPIYKPREG
EGEEQFAETKENNSNYRTLLEKEKEWTMALSNSQLNTIVTVNQAGEIASFHENGGLCPTV
IDSQRPTPTVGFVDCLYGTVPKLKDMHVAHAHPPGMQYPDLQQDARLKETFLFTAGKGFP
DPTQSEYLELRAKLQTKPDYLEVLEKSYRF
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggttaccctgctaagcacaatagctttaggatggactacgccgatccccatg
ctggacgactcagaggaggtagacgagccttgctttgacccctgctactgtgaagtgaag
gagggcattttccacgttcactgcgacagcaaaggatttacaaatgtcagtcaaatatcc
caatcatggacgaggcccttcaagctcaacctacaaagaaactcgatgcgcaagttgtac
tttaacagcttcctgcatctaaacaacgccatatcacttaaccttggaaacaacgcgtta
caggacattcatgttggtgcgttcaatggtctgagcattttgaaaaagcttttcctgcac
gaaaataaactggaggtgttcagaaacgatactttcttgggcctggaaagcctagagtac
ctccaggctgattataacgtaattaaaagaatagagagcggggcatttaggcacctgcac
aaactcagagtgctgattttgaatgacaatttgatacccgttctacccaatatgttattc
aggtctgcctctctcacgcaccttgacctacgcggtaaccggttaaagattctgccttac
aagggcacgctggagttcattggccgcactctcatggagatccaattagaagaaaacccg
tggaactgtgtgtgtgagattgtgcagcttaaaacgtggcttgaacgtattccttataca
gcgttggttggtgatataacgtgcgagcacccctttcacctccatggcaaggacctacgc
gagattaaacaaagtgagctgtgtcccttgctgtcagaggctgaagtggaggctaaactt
ggcatccccaaaataccgttcagtaacgagaacacgtggcccaccaaaccctcatcaatg
ctgtcttcatttcacaacactgcctcgtcggtggagtacaaagagagacccgtaaagcca
acaaaacgacccaaacccaccaaaactccaccgactccacgcagtatttaccccgggcca
aatcagccacctatggctggttatcagacaagaccgcccattcctatcatctgcccagcg
ggatgtatctgcaatttacacatcaatgatttagggctcaccgtcaattgtaaagagaaa
gcctttcataacatatctgaactgttgccgcgtccattaaatgccaagaaactgtacctg
agtggaaacttaatacagaaaatttacagatcagatttctggaatttttccagtttggat
ttactacacctgggtaacaaccggatatcatacgttcaagagggtgcattcattaacctg
cctaacttgaaaagcctatatttaaatggcaacgacatcgagaagctaactccgggcatg
tttcgtggacttcagactctgagttacttgtactttgagtacaacgttatacgagagatt
cagcctgccgcattcagcctgatgccgaatttgcagctggtctttctgaatgacaacctg
ctgcgcacgctgcccgttgatgctttcgctggcacctcgctggccaggctcaacctgcgc
aacaactacttcctccacctgccagtcagcggggtcctggagcatctgcactccattgtc
cagattgacctacaccagaacccgtgggactgttcctgtgacatcatcccgctcaagcag
tggatggagaagctgagctctgtcattgtcgtcggggaggtgatctgcaagacgcccaac
ttcgttttcgggaaggatctgcgctccctcgacgccgaggtcatctgccccgagctgaag
ttcacggctccctccgccgcttctcccaacgacattacatccaccagcactttcggatta
ggatacgccccagcaactggcgctgtccctctctcggtgctgattctgagtcttttgata
ctgtttatctcttctgtgtttgtggctgctggtctgttcgccttcgtcctaagaagacgg
aagaaactgcccttcagaaagcgacaggaggtggacctgaccggcatccagatgcagtgt
aggatatttgaagagcggcagacagcctcgccagagaaaccgcccggccatgtttatgac
tacatcccccatcccgttacacagatgtgcaacaaccccatatacaaaccacgagaggga
gagggcgaagagcagtttgcagagaccaaggaaaacaacagcaattatcgaactctgctt
gagaaggagaaagaatggacgatggctctgtccaattctcagctcaacaccatcgtcacc
gtcaatcaggcgggtgaaatagcgagttttcacgaaaacggggggctttgccccacagta
atagacagccagagacctacccctacggtggggtttgtagactgcctttatggcacagtt
cctaaattaaaggacatgcacgttgcgcacgcacaccccccaggaatgcaatatcccgat
ttacagcaagacgccagattaaaagaaacatttcttttcaccgcgggtaaaggatttccc
gacccgacccaaagcgaatacctcgagttaagggccaaactccaaaccaagccggattac
ctcgaagtgttggagaaatcataccgattctaa
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