Clupea harengus (Atlantic herring): 105897133
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Entry
105897133 CDS
T09045
Symbol
mindy4b
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105897133 (mindy4b)
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105897133 (mindy4b)
Ubiquitin system [BR:
char04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
105897133 (mindy4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
105897133
NCBI-ProteinID:
XP_012679470
UniProt:
A0A6P3VRM3
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All DBs
Position
9:16905709..16922216
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AA seq
472 aa
AA seq
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MEEDTDNTDIHKRKDVNSELEEILRHIADLDKRRALFNARGLELKTFAKRPPERYNAEED
AEDVSGSASATKPLRAQAHQLTVPYSIPRALAVHPSLGGKPVSPELAVSLRKTLFGNVFH
IFNYEWKKSCFKFREPYSALSYALEAERGGARAIQMVVQANIIKYLLFSRKADSDCYGMQ
SLEEVDEKEQEHALASALADILWTAGDEQAATVTLVTSDRCFTPVLDYKSDSFTERLQLF
NFLRKEDTQRFIYEHIQCFKEEGSHGVILFLYSLILTRTIDRLREDLDKTTTHLLQQSLG
NFVCRQALLNLLLTGRASPNVFNGTLLYDENGDLLEHPLHGVLARSDVGYLHWSREQVKQ
GKLPAVGSMLKTPKLPVWVCSINDTYSIIFSPHPSLLSDWKMEHLFNLYFYNGQSTQTST
ALLTIDTHSHHWEVEKRDVQGDPEKRFPSVEMTIRTKWEGAAIDWNGIGPFY
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagacacggacaacacagacatacacaaacgaaaagatgtcaattctgaattg
gaggaaattcttcgtcatatagcagacctggacaaacggagagcgctcttcaacgcgcga
gggttggaattgaaaacctttgctaagaggccacctgagcgttataacgcagaagaggat
gcagaggatgtttccggatctgcatctgccaccaagcctttgcgtgctcaggcccaccag
ctcacagtgccttactccatcccccgagcattggctgtgcacccaagtctgggaggaaag
cctgtgtccccagagcttgctgtgagtcttaggaagactttgtttggcaatgtgtttcat
atcttcaactacgagtggaagaaatcttgcttcaaattcagagagccctactcagctctg
tcatatgctttggaggctgaacggggtggcgcccgagcaattcagatggtggtccaggca
aacataatcaaatatctcctgttttcacggaaggccgattctgactgctatggcatgcag
agtctggaagaggtggatgagaaagagcaggagcatgctctggcttcagctctggcagat
atattgtggacagccggagatgaacaggctgccactgtcaccctggtaacatccgatcgc
tgtttcactccagtcttggactacaaatctgacagtttcacagagaggctacagctcttc
aactttcttagaaaagaagacactcaaaggttcatctatgagcatattcaatgttttaaa
gaggagggaagccatggagtcatcctcttcctctacagcctgattttgaccaggactatt
gataggttgagggaagacctggataaaaccaccactcatctactacagcaaagcttgggg
aacttcgtatgtcgacaggcactgctcaaccttttgcttaccgggcgagccagtcctaat
gtcttcaatgggaccctgttatatgatgaaaatggtgacctgttggagcaccctcttcat
ggggtactggctcgcagtgatgttgggtatctgcactggagccgagagcaggttaaacaa
ggcaaactgccagcggttggcagcatgctgaagacgcccaaactgcctgtctgggtatgc
agtatcaatgacacctacagcattattttcagtccacatccctccttactctctgactgg
aagatggaacatctctttaacctgtatttctacaatggccagtccacccagaccagtact
gctcttctgaccatagatacccattcacatcactgggaggtggagaaaagggatgtccag
ggggaccctgaaaagagattcccgtctgtagagatgacaatccgtaccaaatgggaaggg
gcagccattgactggaatgggatagggcctttctactga
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