Clupea harengus (Atlantic herring): 105897164
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Entry
105897164 CDS
T09045
Symbol
socs9
Name
(RefSeq) suppressor of cytokine signaling 9
KO
K04698
suppressor of cytokine signaling 5
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105897164 (socs9)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
105897164 (socs9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOCS
SOCS_box
SH2
Lin-8
IER
EIIBC-GUT_N
Motif
Other DBs
NCBI-GeneID:
105897164
NCBI-ProteinID:
XP_031429495
Ensembl:
ENSCHAG00000027207
UniProt:
A0A6P8G1F9
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Position
9:15557607..15562867
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AA seq
627 aa
AA seq
DB search
MSVPKDMGERGKERERGARPKVRQSRSEERREAGVSRKGGRGKKKGLPSQGMVMDRPVSD
GFKYGDQMGSLVRECGSSSPVRERRRWPGLGSERSTVRLAQDGAYGVSLSELPTQEAEGK
AAASGGSSSSNSNSSSRTLRQKIQDAVGQCFPIKSHSTVSSAHIFSPSSVASSSSSSSSS
SSSSSSSSLSVSSRRKIHLSELMLDSCPFPAGTELAQKWYLIKQHTAPISQPPLLESSSP
GGSVEVGGDAPAAAAVTDTVEDEDDLLRERRRISIEQGVEPPPNAQIHTFEVTAEINPLY
KLGPKLAHGMNELAGDDRATLLQQQQQQQQEQQQQQQQEQEQQQQQQQQQLQQQQQQQQL
LLQRQHQQHQLLLQSCLDTLDEVAASSSSSTAAAASAASAASSSSSSSSNSSTVLGVTSN
LGSGSESTSLRGGCPQSNPPEGDPAKPKERFRIHTQIDYIHCLVPDLLQITNLPCYWGVM
DRYQAEALLEAKPEGTFLLRDSAQEDYLFSVSFRRYGRSLHARIEQWNHNFSFDVHDPSV
FHAPTVTGLLEHYKDPNSCMFFEPLLSTPVHRTQPFSLQHICRAVISNHTSYDGISALPI
PNALKEHLKEYHYKQRVRVRRMDTWWE
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcccaaagacatgggagagcggggcaaggagagggagcgtggcgcccgcccc
aaggtgaggcagagccgctctgaggagaggagggaagcgggcgtcagcaggaagggtgga
cggggcaagaagaagggcctgccctcacaaggcatggtcatggataggccagttagcgat
gggttcaagtatggagatcagatgggcagcttggtcagagagtgtggttcttcgtcacca
gtgcgggagcggaggaggtggccaggcttagggagtgaaaggagcactgtgaggctggca
caggatggggcgtatggggtgtctctctcagagctgcccacccaggaggctgagggaaag
gcggcagcgagtggaggtagcagtagcagtaacagcaacagcagcagccgcaccctcagg
cagaagatccaggatgcggtgggccagtgcttcccgatcaagagccacagcacagtgtcc
tccgctcacatattctctccttcatctgttgcttcatcttcctcctcctcctcttcatct
tcatcctcctcttcgtcttcgtcactctcagtttcctcgaggcgtaagatccaccttagt
gagctgatgctggacagctgccctttcccagctgggacggagctggcacagaagtggtac
ctcatcaagcagcacacggcgcccatctcccagcctcccctcctggagtcttcctccccg
ggcggctcagtagaggtgggtggagatgctcctgccgccgccgctgtcactgacactgtg
gaggatgaagatgacctgctgcgtgagcgccggcgaatcagcatcgaacaaggcgtggag
ccgccacccaacgcacaaatccacacctttgaggtgacggcggagatcaacccgctgtac
aaactggggcccaagctggcccacggcatgaacgagctggctggagacgaccgagccact
ctgctacagcagcagcaacaacaacaacaagagcaacaacaacaacaacagcaggagcag
gagcagcagcagcagcagcagcagcagcagctgcagcagcagcaacaacagcagcagctc
ctacttcagaggcagcatcagcagcaccagctgctcctccagagctgcctggacacgctg
gatgaagtggctgcctcctcgtcctcttccacagcggcggctgcttcagctgcctcagca
gcctcgtcctcctcctcctcctcctccaactcctccactgtcctgggggtcacgtccaat
cttggctcgggatcggaatcgacctccctgaggggcggttgccctcagtcgaacccccct
gagggcgatccggccaaacccaaggagcgcttccgcatccacacccagattgactatatc
cactgcctggtacccgacctgctgcagatcaccaacctgccctgctactggggcgtgatg
gaccgctaccaggccgaagcgctgcttgaggccaagcccgagggcaccttcctgctgcgc
gactcggcccaggaggactacctattctcggtgagcttccgccgatacgggcgctcactg
cacgcgcgcatcgagcagtggaaccacaacttcagcttcgacgtgcacgaccccagcgtc
ttccatgcgcccaccgtcaccggcctgctcgagcactacaaggaccccaactcgtgcatg
ttcttcgagccgctgctgtccacgcctgtgcaccgcacacagccctttagcctgcagcac
atctgccgcgccgtcatcagcaaccacaccagctatgacggcatcagtgccctgcccatc
ccaaacgcgctcaaggagcacctcaaggagtaccattacaagcagagggtgcgcgtgcgc
aggatggacacatggtgggagtag
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