Clupea harengus (Atlantic herring): 105897171
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Entry
105897171 CDS
T09045
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105897171 (wdhd1)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
105897171 (wdhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Ctf4_C
WD40
HMG_WDHD1
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
HMG_box
Beta-prop_IFT140_1st
eIF2A
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
DUF6476
Motif
Other DBs
NCBI-GeneID:
105897171
NCBI-ProteinID:
XP_031436657
Ensembl:
ENSCHAG00000025064
UniProt:
A0A6P8GBK3
LinkDB
All DBs
Position
14:complement(20146152..20166360)
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AA seq
1138 aa
AA seq
DB search
MPCERKPMRYGHSEGHTDVCFDEQGKCILTCGSDGDVRIWESLDDDDPKSINVGEKAYSL
TLKNGKLVTAVSNNTVQIHTFPDGDPDGILTRFTTNANHVAFNHSGTRVAAGSSDFLVKV
VEVADSGQQKTLRGHEAPVLSVNFDPKEEFLASSSCDGSVVVWNIDEQVQVTSWDILQKS
SDVTNAKSLCRLAWQPQSGKLLAVPVETSVHLYERNTWSHVSSLADDFITQAINVIIWSP
CGRFLAAATVGGYLCVWDVETKLCLERQKHEKGYTVCGMAWHPSGGQIAYTDTEGCLGLL
DGLATASAAAAQPTKSLKAKESKETKDYDDLFDEDDNQFLDEEATESRSPAKKSAVGEDE
DDDDDDLMPATGRPRHRSSFLDDDNSQDAGSVNLDKYDAADDASSAIVPKVPAMVPRPVY
EGPMPTPPQRPFQAGSTPAHLMHRFMMWNSVGIVRGYNDEQDNAIDVEFHDTAIHHAMHL
TNSLGHYVADLSQEAVLLACESTDELASKLQCLHFSSWDTSKEWMVDLPKGEDALAVCLG
QGWGAVATSGLLVRLFSIGGVQKEVFSLPGPVVCMAGHGEQLIIAYHRGTGFDGEQSLGV
QLLQLGRRRRQVIHGEPLPLSRKSYLAWLGFSAEGTPCCIDSEGVVRLLNRSLGNTWAPV
CNTREHCKGKSDHYWVVGIHENPQQLRCIPCKGSRYPPTLPRPAVAILPFKLPLCQTTTE
KGQMEEQYWRSVIFQNHHSFLASSGYEIDEDGQNQAQKEQQELLMKMFALSCKLEREFRC
VELAEMMTQSVVTLAIRYASRSRRMALAQRLSELALEKANQEQQEEEEEEPHHTTPNLGY
RHSSEEWRGARQSNSRTPQQNRHEEEEEEVEEEEEEETQDEQMEAEEAAESRKPRLNPFK
KGPASPEKASPKPVSTVSKDGRVNPFKVSGPVKQSASPAGRAGNVLDTMTMSNRKPAASA
TTGSKQNKALVLKPLVPRPKSKTQATLLQMSSRSVSKKKDEKEKEKEKEPATERLKQAED
ATPPHSAGDNQENRRPKTGFQLWLEENRKSILADDPDMEETAVIKEAMGRFRTLSAEERL
SWTERAKGDVGDVKKRKREEGEGREDEGEDQQREEASAKKKKPLDTSAKLSAFAFSKN
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgccttgcgaacgaaagcctatgcgctacggccattcggaaggccacaccgatgtctgc
ttcgatgagcaaggaaagtgcatcctcacctgcggaagcgatggcgatgtccgtatctgg
gagagcctggatgatgacgaccccaaatcaataaatgttggagagaaggcctactctcta
accctcaagaatgggaagttggtcaccgcggtgtccaacaatacagtgcagatccacact
tttcctgatggggaccccgatggcatactcacccgtttcaccacaaatgccaatcatgtc
gctttcaaccacagcggcacccgagtggctgccggctccagtgacttcctggtgaaggta
gtggaggtagcagacagcggtcagcagaagacccttagaggacatgaggctcctgttctc
agtgtgaactttgaccccaaagaggagttcctggcttcatctagctgtgatggatcagtg
gttgtgtggaacattgatgagcaggtccaagtgaccagctgggacatcctccagaagtcc
agtgatgtcacaaatgccaagtctctgtgtcgacttgcctggcagccccagtccgggaag
ctcctggcggtccccgtggaaaccagcgtccatctttatgagaggaacacctggagccac
gttagctccctcgccgatgatttcatcacacaggccataaacgtcatcatctggtccccc
tgtggacgcttcttggcagcggccaccgttggagggtacctgtgcgtttgggatgtggag
acaaagctgtgtttagagaggcagaaacacgagaagggctacacggtgtgtgggatggcg
tggcacccctctggggggcagatagcttacacggacacagagggctgcctcggcctgctg
gacgggcttgcgaccgcttctgctgctgcggcacagcccaccaagagcctcaaggctaag
gagagcaaggagacaaaggactacgatgacctgtttgacgaggatgacaaccagttcctc
gatgaagaggcgactgagtctcgatcgcccgcgaagaagagtgctgttggtgaggacgaa
gatgacgacgacgatgacctcatgcctgccacgggccgacctcgccacaggagcagcttc
ctggacgacgacaactcccaagatgcagggtccgtcaacctggacaagtatgatgccgcc
gacgatgccagcagcgccatcgtgcctaaggtgcccgcgatggtgccaaggccggtgtac
gagggccccatgcccacccccccacagaggcccttccaggccggctccacccctgcccat
ctcatgcaccgcttcatgatgtggaactccgtggggatcgtgcgcggctacaacgatgag
caggacaatgccatcgacgtggagttccacgacacggccatccaccacgccatgcacctg
accaactcactcgggcactacgtggctgacctatcccaggaggctgtgctgctggcctgc
gaaagcaccgacgagcttgccagtaagctccagtgtctgcacttctcctcctgggacacc
agtaaggagtggatggtggacctgcccaagggggaggacgccctggcggtgtgcctgggt
cagggctggggagccgtagccaccagtggcctcctggtgcgcctcttctccatcgggggc
gtccagaaggaggtgttcagcctacccggaccggtggtgtgcatggcggggcacggggag
cagctcatcatagcctaccacagaggtacgggctttgacggggagcagtctctgggtgtg
cagctgctccagttggggcggcgcagaaggcaggtgatccatggggagcccctccccctc
tcccgcaagtcttacctggcctggcttggcttcagcgcagagggaaccccatgctgtatt
gactcagagggagtggtgcgactgctaaatcggtccctgggcaacacgtgggcccccgtg
tgcaacaccagggaacactgcaagggcaagtccgaccactactgggtggtaggcatacac
gagaatccccagcagctcagatgtatcccctgtaaaggctctcgataccccccaactctg
ccccgccctgcagtggccatcctgccctttaaactgcccctgtgtcagaccaccacagag
aagggccagatggaggagcagtactggcgctcggtgatcttccagaaccatcacagcttc
ctggcgtcgagcggctatgagatagacgaggacggccagaaccaggcccagaaggagcaa
caggagctactcatgaagatgttcgctctgtcatgtaagctggagcgtgagttccgctgt
gtggagctggcggagatgatgactcagagcgtggtgacgctggccatccgttatgcctcg
cgctccagacgcatggcgctggcccaacgcctcagcgagctcgccctggagaaggccaat
caggagcagcaggaggaggaagaggaggagccacaccacaccactcccaacttggggtac
agacacagtagtgaggagtggagaggagcgaggcagagcaacagccgaacaccacagcag
aacagacacgaggaggaggaggaggaggtggaggaggaggaggaagaagagactcaggac
gagcagatggaggctgaggaagcagcagagagcaggaagccacgtttgaaccccttcaag
aagggaccagcatccccagagaaagcctctcctaaacctgtttctacagtaagcaaggac
ggaagagtgaatcctttcaaggtgtctgggccagtcaagcaatcagcctcgcccgctggc
cgggcagggaacgttctggataccatgacgatgtccaatcgcaagcccgcagcgtcggcc
accacggggtccaagcagaacaaagcgctcgtgctgaaacccttagttcccaggcccaag
tctaagacccaggccacactgctgcagatgagctccaggtctgtgagtaagaagaaggat
gagaaggagaaggagaaagagaaggagcccgctacggagagactgaagcaggcggaggat
gccacaccacctcattctgctggggacaaccaggagaaccgcaggccaaagacgggcttc
cagctgtggctggaggagaaccgtaagagcatcctggctgatgatccagacatggaggag
accgcagtcattaaagaggccatggggcgcttcaggaccttatctgcggaggagagattg
tcctggacggagagagcgaaaggagacgtgggggacgtgaagaagagaaaacgagaggag
ggtgaggggcgagaggatgaaggtgaagatcagcagcgagaggaggccagtgcgaagaaa
aagaaacctctggacacttccgccaaactctccgcatttgccttcagcaaaaactaa
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