Clupea harengus (Atlantic herring): 105897179
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Entry
105897179 CDS
T09045
Symbol
utp25
Name
(RefSeq) U3 small nucleolar RNA-associated protein 25 homolog
KO
K14774
U3 small nucleolar RNA-associated protein 25
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
char03009
]
105897179 (utp25)
Ribosome biogenesis [BR:
char03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105897179 (utp25)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP25_NTPase-like
Utp25_C
DEAD
Motif
Other DBs
NCBI-GeneID:
105897179
NCBI-ProteinID:
XP_012679526
Ensembl:
ENSCHAG00000020321
UniProt:
A0A6P3VRP8
LinkDB
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Position
14:22002869..22013390
Genome browser
AA seq
754 aa
AA seq
DB search
MGKRQRRENDAISKLTKKQKKHLKEFGEEHPFHDNVSERPERTQIVHLRDSPKRKNAESD
DELQPEEQPSAYQKLLGTLKHSEDDSEEDESDEEEEELIEEKEESELESEQDGEEEDDTK
EKEVDPVLKGVEAVVEAGGALDGVDDREGGQAGDEFTDKKHESQFCLETNIPTEGDPDGE
DDTTTEGDEDTFMKHMNTELTEEEVKLMADGRKTKTQIKWPRLGNLLCTSSLERLPAPGQ
TSSIDIPPLHKALQANWTSLNQAFQPKGAPLQELSDLQRELLGLMGTYRDVYVPECSPST
DAKEVRSAYCLHVLNHVLKANSNVLTHNASLKVGEMAEDEARDQGLTRPKVLIVVPFRDS
ALQVVQTFVHLLEPKEKKIDVSNKKRFKDEFGEDPEDRPTNLIRPDDYQAIFSGNVDDHF
RICVSILKRSIRLYSPFYSSDIIIASPLGLRTVLGVEGEKKRDFDFLSSIEVVVLDQADV
LLMQNWEHVLHVMKHLNLQPSDSHGVDFSRVRMWNLNGWAKYYRQTLVFSSIQEPKINNI
LTKHSFNCRGQVATKNLPKTGSICQVLVQLPHVFQLFSADSLMDQDARFQFFVDKVLPQY
RDSVMSHTFIYVPSYFDFVRLRNYLKKEEVNFTSISEYSPRSEVSRARHYFQNGDIQFLL
FSERFHFYKRYTIKGIRHLLFYGLPTYPHFYSEVCNMLQAGTDVVDTASCTCTALYSRYD
AHKLAAVAGAERAAQMLQSKKPVHLFITGEDKAS
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggggaagagacaacgacgggaaaacgatgctattagcaaattaacaaagaagcagaaa
aaacatttgaaggagtttggcgaagagcatcccttccacgataatgttagtgagagacct
gagaggacgcagattgtacatctgcgtgacagtccaaagcgaaagaatgctgaaagcgat
gatgagctccagccggaggagcagccatcagcttatcagaaactactgggcacgctgaag
cactccgaggatgatagcgaggaggacgagagcgatgaagaggaggaagaattaattgaa
gaaaaagaagagagtgaacttgaatctgagcaagatggtgaggaagaagacgacacaaaa
gagaaggaggttgatcctgttcttaagggggttgaagcagtggtggaagctggtggagca
ttggatggagttgatgaccgtgagggaggccaagcaggggatgaattcacagacaagaag
cacgaatcccagttctgtttggagacaaacatccctacagagggagatccagatggagaa
gatgacaccactactgaaggggacgaagacactttcatgaaacacatgaatacagaactt
actgaagaggaggtgaagctgatggcagatggtagaaaaactaagacccagatcaagtgg
cccagactgggtaacctgctatgcacctctagcctggagaggctcccagccccagggcaa
acctccagcattgacatcccccctctccacaaggcccttcaggctaactggacctcgctg
aaccaagcctttcagccaaagggtgctcctctgcaggagctgagcgacctgcagagggag
ctcttgggtctcatgggtacctacagggatgtgtatgttcccgagtgctcgccttccact
gatgcaaaggaggtgaggagcgcctactgcctccatgttctcaaccatgtgctgaaggcc
aactccaacgtgctcacccacaacgccagcctcaaagttggcgagatggcggaggatgag
gcccgagaccaaggccttaccaggccaaaggtgctgatcgtggtgcccttccgagacagt
gccttgcaggtggtccagaccttcgtccacctcctggagcccaaagagaaaaagattgac
gtgagcaacaagaagaggttcaaggatgagttcggggaggatcccgaggaccggccaacc
aacctcatcagacccgacgactaccaagctatcttctctggcaatgtagatgaccatttc
aggatatgtgtatctatattgaagcgcagcattcgtctttattcgccgttctactcatcg
gatatcatcattgcctccccgctgggcctgcgcacggtgctgggggtggagggggagaag
aagcgtgactttgacttcctgtcctccatcgaggtggtggtgttggaccaggcggatgtc
cttctcatgcagaactgggagcatgtgctgcatgtaatgaagcacctgaacctgcagccg
tcggactcccatggagtggacttttccagagtgcgcatgtggaacctgaacggctgggca
aagtactaccgccagactctggtgttcagttccatccaggagcctaagataaataacatt
ctgaccaagcacagcttcaactgcagaggacaggttgccaccaaaaatctccccaaaaca
ggttcaatctgccaggtgcttgtgcagttgccacacgtattccagctgttcagtgcagac
agtttgatggaccaggatgcgaggtttcagttttttgtggacaaggtgttgccccagtac
agagactccgtcatgtcccacaccttcatctacgtgccgtcatactttgactttgtgcgc
ttacgcaactacctgaagaaggaggaggtgaacttcaccagcatctcggagtactcgccg
cggtctgaagtgtcccgggcgcgccattacttccagaacggtgacatccagttccttctc
ttcagtgagcggttccacttctacaagagatacaccataaaggggatccgacacctcctc
ttctacggtctgcccacctatccccacttctacagcgaggtgtgcaacatgctgcaggcg
ggcactgatgtggtcgacactgcaagctgcacctgcacggccctctactctcgctacgat
gcccacaagctggccgccgtggccggagcagagcgggcggcccagatgctgcagtccaaa
aagccagtgcacctcttcatcaccggggaggacaaggcctcgtga
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