Clupea harengus (Atlantic herring): 105897215
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Entry
105897215 CDS
T09045
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3-like
KO
K04953
cyclic nucleotide gated channel beta 3
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105897215
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105897215
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Borrelia_P83
TMEM214
Zip
RR_TM4-6
DUF4746
Motif
Other DBs
NCBI-GeneID:
105897215
NCBI-ProteinID:
XP_031440321
UniProt:
A0A6P8GR78
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Position
17:18954957..18966122
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AA seq
691 aa
AA seq
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MLCLPSTESAPAAAPAPAPAPTAAPAPAPAPGGDKPPGEGGEGQEEEPPAPRPIVINRYA
DQLLRDIALRMKERTDIYKDKVKDPYDSSPERSLPATPLYTKEEYKLKLEEDKRRQEEAE
QKKKEAEEKKKKDAEEKKKKDEEAKKQKEEEEKKKKEEEPPEEAKPIGKSFCPKISCTFV
DVLLNPIEDKMDKHLGTSVDPFSDRRYLVWLGVISTAFNYNLWFITARMTFPYHTPEAIP
IWFAFDLIADSIYIFDMIFFQQRMQFVKGGDVIYDKVQTKKHYRESKKFQYALLSVAPVD
LLYIPFGFKSIFRANRLLRSEAFDEFSDRLEAYMTKAYIWRVTRTIGYLLFVLHINACVY
YEASAYEGIGATKWAYSGNGSAYLRCYYYAVRTLVNIGGLDEPHSVFEISFQLSNFIVGV
FVFSGLIGQMRDVIGAATAGQTYFRNSMDNCMSYMVINKIPKLVQGRVRTWYNYTWDAQG
MLDESELLDKMPLVMKTAIAVDINLTTFQKIELFKGCDGQMLVDMLLRLKSIIYLPGDFV
VKKGDIGKEMYIIKSGAVQVVGGPDNSIVFVTLKAGCVFGEISLLQSSANGGNRRTANVK
AHGFLNLFVLEKKDLFDILVHYPASQKVLARKGKLLMKAKGPAAAKAAEDKKKGLTLFGP
KPPTPKFLRLFGAGLNKQSLLERMKAAANSS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcctcccttctacagagtctgcccctgcggccgctcctgcacctgcacctgcc
cccacggctgccccagccccggctcctgcacctggtggagacaagccaccaggggagggg
ggcgaagggcaggaggaggagccacctgcaccacggcctatagtgataaacaggtatgcg
gatcagctccttcgtgatattgccctacgaatgaaggagcgaacagatatctacaaggat
aaggttaaggacccatacgactcttcccctgagaggagccttccagccacgccactgtac
acaaaggaggagtataaactcaaactggaggaagacaaaaggaggcaagaggaagcggag
cagaagaagaaggaggcagaggaaaagaaaaaaaaggacgcagaagagaagaagaaaaaa
gatgaggaggcaaagaaacagaaagaggaggaggaaaagaaaaagaaagaggaggagcca
ccagaagaggccaaacccataggaaaatccttctgcccaaagatctcatgtacgtttgtg
gatgttctcctgaatcccatagaggacaagatggacaagcacctcggcacctccgtggac
cctttctcagatcgccgctaccttgtctggttgggtgtgatctccactgccttcaactac
aacctctggtttatcactgctcgcatgaccttcccttaccacacaccagaggccatccct
atctggttcgcatttgacctgattgcagattccatctacatcttcgacatgatctttttc
cagcaacgcatgcagtttgtgaagggcggtgacgttatatatgacaaagttcaaacgaag
aaacactacagggaatccaaaaagttccagtatgcactgttatccgttgcgcccgttgac
ctgctctacatcccctttgggttcaagtccattttcagagccaatcgcctgctgcggtcc
gaggccttcgatgagttcagtgaccggctggaggcgtacatgaccaaggcctacatctgg
agagtcacccgcaccattggctatctgcttttcgttctgcacatcaatgcctgtgtctac
tatgaggcttcagcctatgaaggtattggagccaccaaatgggcctacagtggaaacggc
agtgcgtacctgcgctgttattattatgctgtgcgaacacttgtcaatattggaggactt
gatgagccacactcagtctttgagatctcgtttcagttgtcaaactttatcgttggtgtc
tttgtgttctcaggcttaattggacagatgagggatgtcatcggggcagccaccgctggt
cagacctatttccgcaactccatggacaactgtatgtcctatatggtgatcaacaaaatt
cccaagctggtgcaaggccgtgtgcgcacctggtacaactacacctgggacgctcagggc
atgctggatgagtcagagctgctggacaaaatgcccctggtcatgaaaacagccattgct
gtggacattaacctgaccaccttccagaagatagaactcttcaagggctgtgatggccag
atgcttgtggacatgttactgaggctcaagtccattatctacttgcctggagactttgtg
gtgaagaagggagacatcggtaaggagatgtacatcatcaaatcaggggctgtgcaggtg
gtgggaggtccagataattccatcgtctttgtaacactgaaggcaggatgtgtgtttggg
gagatcagtctgttgcagtcatcagctaatggaggcaaccgcagaacagcaaacgtaaag
gcccacggctttctcaacctctttgtgctggagaagaaagatctgtttgacatcctggtc
cactacccagcgtcccagaaggtgctggccaggaaggggaagctactgatgaaagcgaag
ggtccggcggctgccaaggcggcagaggacaagaagaagggactgactctgttcggaccc
aaaccccccaccccaaagtttctccgccttttcggcgctggacttaacaaacaaagcctc
ttggaaaggatgaaggctgctgctaattcatcataa
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