Clupea harengus (Atlantic herring): 105897249
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Entry
105897249 CDS
T09045
Symbol
hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00280
Valine, leucine and isoleucine degradation
char00650
Butanoate metabolism
char01100
Metabolic pathways
char04146
Peroxisome
Module
char_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
105897249 (hmgcl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
105897249 (hmgcl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
105897249 (hmgcl)
Enzymes [BR:
char01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
105897249 (hmgcl)
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GFIT
Motif
Pfam:
HMGL-like
TGT
Motif
Other DBs
NCBI-GeneID:
105897249
NCBI-ProteinID:
XP_012679617
Ensembl:
ENSCHAG00000022680
UniProt:
A0A6P3VS10
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Position
14:22510319..22516555
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AA seq
339 aa
AA seq
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MATLMRFVNHSFCSRMGHRSIALSCNSSVARAVSFGAAAGKPLPAKVKIVEVGPRDGLQN
EQTIVPAEVKIRLIDMLSEAGLPVIEATSFVSPKWVPQMADQVEVMQGIHKKPGVNYPVL
TPNLKGFQAAVKAGAQEVAIFGAASELFSKKNINCSVEESLQRFEEVTKAAKAQGVLVRG
YVSCVLGCPYEGKVSPEKVAHVAKRLYAMGCYEISLGDTTGVGTPGGMSEMLEAVKQEVP
VDALAVHCHDTYGQALANILVALQMGISVVDSSIAGLGGCPYAKGASGNVATEDVVYMLH
GLGIQTGVDLHKLMDAGAFICQFLNRRTSSKVSQAACKL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcttatgagatttgtcaaccattccttctgttccagaatggggcaccgctcc
attgcactgagttgtaactcatctgtagcaagagccgtgagttttggtgctgctgcaggg
aaaccgctgcctgccaaggtgaagattgtggaagtggggcccagagatggtcttcagaat
gaacagaccattgtccctgctgaggtgaaaatccgactgattgacatgctgtcagaggca
gggcttcctgtcatcgaagccacaagctttgtctctcccaagtgggttccacagatggca
gatcaagtggaagtcatgcagggcattcacaaaaagcccggagtgaactatccggtccta
actcctaatctaaagggcttccaagctgctgtgaaagcgggggcacaagaggtggctata
ttcggtgctgcatctgagctcttcagcaaaaagaacatcaattgttccgtggaggagagt
ctccagcgctttgaagaagtcaccaaggcagccaaggcacaaggtgtacttgttagaggg
tatgtttcgtgtgttttgggatgcccatacgaagggaaagtgtcacctgagaaagttgcc
catgtagcaaagcgcttatatgccatggggtgctatgagatctcccttggcgacaccact
ggggttggcactccaggtggcatgagcgagatgctggaggcagtgaagcaggaggtgcct
gtggatgccctggctgtgcactgccatgacacgtatggccaggccctggccaacatcctg
gtagcactacagatgggaataagtgtggtggactcctctatagctggacttggaggctgt
ccatatgccaaaggggcttctgggaacgtggccactgaagatgttgtttacatgctgcat
ggacttggaattcaaactggagtggatcttcataagctgatggatgctggtgcattcatc
tgtcagttcctgaacagacggaccagctcaaaagtgtctcaggctgcctgtaaactctga
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