Clupea harengus (Atlantic herring): 105897277
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Entry
105897277 CDS
T09045
Symbol
c1galt1a
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00512
Mucin type O-glycan biosynthesis
char00514
Other types of O-glycan biosynthesis
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
105897277 (c1galt1a)
00514 Other types of O-glycan biosynthesis
105897277 (c1galt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105897277 (c1galt1a)
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
105897277 (c1galt1a)
Glycosyltransferases [BR:
char01003
]
Glycan extension
Type 3 chain
105897277 (c1galt1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
105897277
NCBI-ProteinID:
XP_031421635
Ensembl:
ENSCHAG00000002545
UniProt:
A0A6P8FD43
LinkDB
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Position
4:2412298..2419328
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AA seq
379 aa
AA seq
DB search
MGVMKSHSSRCAFFLGFVLGSCTLYFFLRQVWFERSFVRHRGTQGRGAEAGDAVPGSGSG
SRAEWKMDGAALINLRQTQEKGEDSLVADELYKKVRILCWVMTGPSNLQTKARHVKATWS
RHCNVVLFMSSVDDPDLPAVGLGTGEGRDQLYWKTIRAFHYVLKNHADDADWFLKADDDT
FVVVDNLRWILSNHTAEEPIYFGKRFKPYAKQGYMSGGAGYILSKEALRRFVEGFRTKVC
THTTSVEDLALGQCMEKMGVLAGDSRDTLHRETFHPFVPEHHLTGSFPKSFWYWNYCYYT
IVEGPQCCSDLAVSFHYVDNVLMYILEYYAYHLRPYGYRPRYRPPVPEGLIGSTQTEQAA
AAAVNPGIEDRLWKRGQAR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcatgaagagccacagctctcgatgtgccttcttcctgggcttcgtcttgggc
tcctgtacgctgtacttcttcctgcgtcaggtgtggtttgagcggagtttcgtacggcac
agagggacccagggcaggggggcagaggctggagatgcagtgccaggcagcggcagcggc
agcagggcagagtggaagatggacggagcggctctcatcaacctgagacagacacaagaa
aaaggcgaagacagcctcgtcgcagacgagctctataagaaagttcgtattctgtgctgg
gtgatgacggggcccagcaacctgcagacgaaggctcgtcacgtgaaagccacgtggagc
cgccactgtaacgtggtgctcttcatgagctccgtggacgatccggacctcccagccgtt
ggccttggcaccggagagggccgcgaccagctctactggaagaccatccgtgctttccac
tacgtcctgaagaaccacgccgacgacgccgactggttcctgaaggccgacgacgacacc
ttcgtggtggtggacaacctgcgctggatcctgtccaaccacacggccgaggagcccatc
tacttcgggaagcggttcaagccgtacgccaagcagggctacatgagcgggggagcgggc
tacatcctgagcaaggaggccctgcggcgtttcgtggagggcttccgcaccaaggtgtgc
acccacaccacctccgtggaagatctggccctgggccagtgcatggagaagatgggcgtc
ctggcgggggactccagggacacgctgcaccgggagacattccatccattcgtccccgag
caccacctgacggggtcgttccccaaaagcttctggtactggaactactgctattacacc
attgtggagggtcctcagtgctgttcagacttggccgtgtctttccactatgtggacaac
gtgctgatgtacattctggagtactatgcctaccacctgcgcccctacggctaccggccc
cgctaccggccccctgtgcctgaggggctgatcgggtcgacccagactgagcaggcggcg
gctgcggcggtgaaccctggcatcgaggaccgcctgtggaaaagaggccaagcccggtga
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