Clupea harengus (Atlantic herring): 105897326
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Entry
105897326 CDS
T09045
Symbol
l1cama
Name
(RefSeq) LOW QUALITY PROTEIN: neural cell adhesion molecule L1.2
KO
K06550
L1 cell adhesion molecule
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105897326 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105897326 (l1cama)
04090 CD molecules [BR:
char04090
]
105897326 (l1cama)
04091 Lectins [BR:
char04091
]
105897326 (l1cama)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
L1 family
105897326 (l1cama)
CD molecules [BR:
char04090
]
Proteins
105897326 (l1cama)
Lectins [BR:
char04091
]
I-type lectins (Siglecs)
105897326 (l1cama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_3
C2-set_2
Ig_5
Glyco_hydro_36C
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
105897326
NCBI-ProteinID:
XP_031421596
Ensembl:
ENSCHAG00000022229
UniProt:
A0A6P8FCX0
LinkDB
All DBs
Position
4:complement(1971108..2022336)
Genome browser
AA seq
1291 aa
AA seq
DB search
MPTSMPGQPVGSRGRCTPLLLPLLHLHLLLLLLALTSRPSQAAIDIPPNYQIPDFKKPPE
ITAQPESITASSDITLTCEASGNPEPTFRWEKDGSEFDLSSDPDLKVTPGTGTFQVTAED
QPISLYSGNYTCFASNELGTAVSNEVQITTENPPTLQKEKKVQFKVEEGESVVLRCNPPA
SIIPPHIHWMDDKLHHIQLNERVTKGLDGNLYFAHTLVEDSRNDYTCNMRYMSARTMFSK
EPITLVVKPSNSVVRNRRPQMLRPMGTQSSYHVLRGQTLELECIVQGLPTPTPQWVRKDG
EMSETRIFRKNNGTLLHFSQVHEADAGQYQCTASNSQGTATHVYSIAVEAAPYWRKEPVS
QLYAPGETVRLHCEADGIPSPRVAWSMNGNPLSEIDPDSRRSVRAGVLTLKNVDYSDTAV
FQCKATNKHGSIVANTYVYVIELPAQILTPDRNPYTVIEGQMAEMECKSFGSPRPVVTWE
NEDFESLLSSPRVTQLSGGSLQISNVSHGDSGLYTCSIPKANISISAELEVFNRTVIVSP
PLELRVQRGKSAIFTCIAKVDPKLDHQLLWRRAGQKLIDSSVDDKYTFADPDLVVADVQQ
EDEGVYTCEIITDLDMAQASGSIAIVDFPDPPSRPQITTPKDRGVTLSWTPGDEHNSPVI
EFQIETEVTAVETDDWRLLRTVAGDTLRAHIDLRPFLSYRFRVVAINDVGMSKPSPASVV
HSTPAAAPDSNPVGVRSQSMDPDTLVIRWEEMDQQNFNGPEFQYKVMWRRVVGAGPAWNS
NFTTSPPYVVTGVGNYTAFDIKVQAVNGIGLALDPVPTIGYSGEDVPLEPPMDVGVALIN
STTIKVTWAAIEKDTVRGHLLGYKIHLTNRGPRSRHHHEEPARRARELQNSVVVVGPTEQ
KKVVGELQPYSRYTVSVSVFNMKGDGPASEPFVFHMPEGVPSPPVSLELDSPSETEMTLR
WRPPAQPNGVLTGYLLQYQQIVETEDSPMQVEPIDNPKVTNVTLKQLDPHSRYRFQVRGR
TSAGEGKPATREGATTLDGVPYSPANISVSVGETSVNLSWASGERHRNVGFHVRYLNKNG
PGWGKWVLSEKLDSSQSFYQLQGLQPGSGYRLVFIYNNATFWETEVHTDGAGVMPVQGGF
ATEGWFIGLVTAIALLVLLLLILCFIKRSKGGKYSVKDKEEGHVDSEARPMKDETFGEYR
SLESDNDEKRTASQPSLCDDSKLCSDDGNLDDYGNSNSVQTEVIMDESLASQYSGIRDNV
PETEAPDSSSLDPPTYTAANQGLPISSAFLD
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccagcatgccaggacagccggttggcagcagggggcgctgcacacctctgctg
ctccccctcctccacctccacctcctcctcctcctcctggccctcaccagcagacctagc
caggctgccatcgacattcccccgaactaccaaatacccgactttaagaagccgccagag
atcactgcccagccagagtcgatcactgcctcctctgacatcacactcacctgcgaggct
tctgggaatcccgagcccacttttcgatgggagaaagacggcagtgaattcgatctctcc
agtgatcctgacctcaaggtgacgcccggtaccggcacattccaggtcaccgcagaagac
cagcccatcagcctgtacagtggcaactacacgtgtttcgcttctaacgagcttggcacc
gccgtctcgaatgaggtccagatcactacagagaatcctcccaccctgcagaaagagaag
aaagtccagttcaaagtggaggagggagagagtgtggtcctgcgctgcaaccctccagcc
agcatcatccctccacacatccactggatggacgacaagctgcatcacatccagctgaac
gaacgtgtgaccaagggcctggacgggaacctgtacttcgcccacaccctggtggaggat
agccgcaatgactacacctgcaacatgcgttacatgagcgcccgcaccatgttctccaag
gagcctatcaccctcgtcgtcaaaccctctaattcagtggtgcgaaatcgaaggcctcag
atgctcagacccatgggcacccagagctcgtaccacgtcctgcggggccagaccctggag
ctggagtgtatcgtccagggcctcccaactcccaccccccagtgggtgaggaaggacggg
gagatgtcagagacgcgcatcttccggaagaacaacggcacgctgctgcacttcagccag
gtccacgaggccgacgcgggccagtaccagtgcacggccagcaactcccaggggacggcc
actcacgtgtactccatcgccgtggaagcggctccgtactggaggaaagagcccgtgagc
cagctgtacgccccgggggagacggtgcgtctgcactgcgaggccgacggcatccccagt
ccccgagtggcctggagcatgaatggaaaccctctctcagaaatagaccccgactcccgg
cgcagcgtgcgagcaggagtgctcaccctgaagaacgtggactacagcgacacggcagtg
ttccagtgcaaggccaccaacaaacacggcagcattgtggcgaacacctacgtctacgtt
atcgaactccccgcgcagatcctcactccagaccgcaacccctacactgtcatcgaggga
cagatggcggagatggaatgcaagagctttggctcaccgcggcccgtggtgacatgggag
aatgaggactttgaatccctcctatcatccccgcgagtgactcagctgagcggaggctcc
ctgcagatcagtaacgtatcccacggtgacagcggcctgtacacctgctccattcccaag
gccaacatatccatcagtgcagagctggaagtgttcaacaggacagtgatcgtctcgccg
cccctggagctgagggttcagcgaggcaagtcggccatctttacctgcatcgccaaggtg
gaccccaaactggaccaccagctgctgtggaggcgtgccgggcagaagctgattgactca
tccgtcgatgacaagtacaccttcgcggatccagacctcgtagtggcagacgtccagcag
gaggatgagggcgtttacacctgtgagatcatcacggatttggacatggcacaggccagt
ggctccatcgccatagtcgactttccggaccctccatctcggcctcagatcaccaccccg
aaggaccgcggcgtgacgctcagttggacgccaggagatgaacacaacagccctgtcata
gagtttcagattgagactgaggtgacagcagtggagacagacgattggaggctgttgagg
actgtggcaggggacacgctgcgtgcccacattgatctgcgacctttcctatcctatcgc
ttccgggtcgtcgccattaacgacgttgggatgagcaagccaagcccagcctcggttgtc
cactccacccctgcggcagcgccagacagcaatcctgtgggggtgcggagccagtctatg
gacccggacacacttgtgatcagatgggaggagatggaccagcagaacttcaacggcccc
gagttccagtacaaagtgatgtggagacgggttgtgggcgctggccccgcatggaactcc
aacttcaccacgtcgccgccgtacgtggtcaccggggtgggcaactacaccgccttcgac
atcaaagtgcaggcggtcaacggcatcggcctggccctggaccctgtgcccaccattggc
tactctggggaggacgttcctctggagcctcccatggatgtgggagtggcattgattaac
agcacgaccatcaaggtcacctgggccgccatcgagaaggacaccgtcagaggacacctg
cttggctacaagatccacctaaccaaccgcgggcccaggagcagacaccaccatgaggag
cccgccaggcgggcgagggaactgcagaacagtgtggtggtggtgggccccacggagcag
aagaaggtggtgggggagctgcagccatactcacgctacaccgtcagcgttagcgtcttc
aacatgaaaggagacggacccgcctccgaacccttcgtctttcatatgccagagggagta
cccagtccaccagtctcccttgaactggacagcccatcagagacagagatgactctgcgc
tggaggccacctgctcaacccaatggcgtcctgactggctacctgctgcagtaccagcag
attgtagagactgaggacagccctatgcaggttgagcccattgacaacccgaaggtcacc
aacgtgaccctaaaacagctggacccccacagccgataccgctttcaagtgcgggggcgc
accagcgcaggggagggtaaacccgccaccagggaaggggccacaacgcttgatggagtg
ccttactcccctgccaacataagcgtttctgtcggagagacgtctgtgaacctgagctgg
gcgtcaggggagagacacaggaatgtcggcttccatgtccgttacctcaataagaacggc
ccaggctgggggaaatgggtgctgtcggagaaactggactcctcccagtccttctatcag
ctgcagggcctgcagcctggctctgggtacagactggtcttcatctacaacaacgccacc
ttctgggagacggaggtgcacactgatggcgcaggcgtgatgccggtgcaggggggcttt
gccacggagggctggttcatcgggctggtgaccgccatcgccctgctggtgctgctgctg
ctcatcctctgtttcatcaagaggagcaaagggggcaaatactcagtcaaagataaagaa
gaaggccacgtagactccgaagcccgacccatgaaggatgagacgtttggagagtacaga
tccctagaaagtgacaatgacgagaagcgcaccgccagccagccgtccctgtgcgacgac
agcaagctgtgcagcgacgacggcaacctggacgactacggcaacagcaacagcgtgcag
acggaggtgatcatggacgagtctctggctagccagtacagcggcatccgagacaacgtg
cctgagaccgaggccccagacagctcgtcgctcgacccccccacatacaccgccgccaat
caggggctaccgatctcatctgcctttttagattaa
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integrated database retrieval system
