Clupea harengus (Atlantic herring): 105897347
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Entry
105897347 CDS
T09045
Symbol
hspa1b
Name
(RefSeq) LOW QUALITY PROTEIN: heat shock 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03040
Spliceosome
char04010
MAPK signaling pathway
char04141
Protein processing in endoplasmic reticulum
char04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105897347 (hspa1b)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105897347 (hspa1b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105897347 (hspa1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105897347 (hspa1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105897347 (hspa1b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105897347 (hspa1b)
03009 Ribosome biogenesis [BR:
char03009
]
105897347 (hspa1b)
03110 Chaperones and folding catalysts [BR:
char03110
]
105897347 (hspa1b)
04131 Membrane trafficking [BR:
char04131
]
105897347 (hspa1b)
03051 Proteasome [BR:
char03051
]
105897347 (hspa1b)
03029 Mitochondrial biogenesis [BR:
char03029
]
105897347 (hspa1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105897347 (hspa1b)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
105897347 (hspa1b)
Spliceosome [BR:
char03041
]
Complex B
Other components
Prp19 complex
105897347 (hspa1b)
Complex C
Prp19-CDC5 complex
105897347 (hspa1b)
Ribosome biogenesis [BR:
char03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
105897347 (hspa1b)
Chaperones and folding catalysts [BR:
char03110
]
Heat shock proteins
HSP70 / DNAK
105897347 (hspa1b)
Membrane trafficking [BR:
char04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
105897347 (hspa1b)
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
105897347 (hspa1b)
Proteasome [BR:
char03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
105897347 (hspa1b)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
105897347 (hspa1b)
Exosome [BR:
char04147
]
Exosomal proteins
Proteins found in most exosomes
105897347 (hspa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Motif
Other DBs
NCBI-GeneID:
105897347
NCBI-ProteinID:
XP_042563497
UniProt:
A0A8M1KHZ6
LinkDB
All DBs
Position
4:complement(1727218..1729411)
Genome browser
AA seq
571 aa
AA seq
DB search
MSVAKGILFGIDLGTPYSCVWVFQRGKVEIIADDQGNGTSPSYVAFTDTERLIGDAAKNQ
VAMNPNNTVFDAKRLIGRRFDDPIVRSDMKLWPFNVVSDRRKPKVQVEYKGETKTFYPEE
VSSMVLVKIXEISDAFLGQKVNNAVITVPAYFNDSQRQATEDAGVIAGLNVFRVISEPTA
IXAYGLDKGNKGERNVSIFDLGGGTFDVSVLAIEDGIFEVKATAGDTHLGGEDFDDRMVQ
HFTDXFKRKNKKDISPNKRAVRRLRTACERAQRTLSSHTQASLEIDSLFDGIDXSFTRAR
FEELNSELFRGTLEPVKKALRDAXMDNSQIHDVVLIGGSTRIPKIQKLLQDFFNGRDLNR
SIHPDEAVAYGTAVQAAILMGDTSENVQDLLLLDGASLSTLGIETAGGVMAPLIKRNTTI
PSKQTXIFSTYSDNQPDVLIQVYKGERAMTKDNNLLGTFELIGIPPAPRGVPQIEVTFDI
DANGILNVSAVDKSTGKENKITITNDKVWLSIDRMVQEADKXKAEDEVQRERIAAKNCLE
SYAFNMKNSVEDEKVEGKISQQEKNKVVEKW
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgctaaaggaatattatttggaattgatcttggaacaccctattcatgtgta
tgggtatttcaacgtggtaaagttgaaataattgccgatgaccagggaaacgggacatca
cccagctatgtggccttcacagacacagagagactaattggagatgcagccaaaaaccaa
gttgccatgaaccctaacaatactgtatttgatgccaaacgtcttattggcagaaggttt
gatgaccccattgtccggtcagacatgaaactttggccttttaacgtggttagtgatcgt
agaaaacccaaagtacaagttgagtacaaaggagaaactaaaaccttctatcctgaggaa
gtctcctccatggtcttggtgaaaatannagagatttcggacgcgttcttgggacagaag
gttaacaacgctgtcatcacggtcccagcttactttaatgactcacagcgccaggcaacc
gaggatgcaggagtcatcgctggactaaatgtttttagggtcatcagtgagccgacagcc
atcnncgcctatggtctggacaaagggaacaaaggggaacgcaatgtatcgatctttgac
cttggagggggtacttttgatgtgtcagtcctggcaatagaagatggaatatttgaggtg
aaagccacagcaggggacacacacctgggtggggaagactttgacgatcgaatggtccaa
cactttactgattagtttaagaggaaaaacaagaaagacataagtccgaacaagagggct
gtgaggagactgcgtacagcatgcgagagggcacagagaaccctgtcgtcgcacacccag
gcaagcctcgagatagactctctctttgatgggattgacnnctccttcaccagggcacgc
tttgaggagttaaactcagagctcttcaggggaacattagaaccagttaaaaaagccctt
agagatgcctaaatggacaacagccaaatccatgatgttgtgctcattggtggctcaaca
cgaatccctaaaattcaaaaactcctgcaggatttcttcaacggtagagatttgaatagg
agtatacatccagacgaggcagtggcgtatggaacggcggttcaggctgctattctcatg
ggtgatacttcagagaatgtacaggacttactgctcctggatggggcttcactctccact
ctgggtattgagactgctggaggagtcatggcacccctcatcaaacgcaataccaccatc
ccatcaaaacagacataaatattctcaacgtattcagacaaccagcctgacgtgttgatt
caggtgtacaagggagaaagagccatgactaaagataacaaccttctaggtacgtttgaa
ctcattggtatcccacctgcacctcgtggagtccctcagattgaggtgacctttgacatt
gatgcaaatggcatcctgaacgtatcagcagttgacaagagcactggcaaagagaacaag
atcacaatcaccaatgataaggtatggttgagcattgacaggatggttcaagaagctgac
aagtaaaaggctgaggatgaagtccagagagagcggattgctgccaagaactgcctggag
tcgtacgcctttaatatgaagaacagtgtagaggatgagaaggtggaggggaaaataagt
cagcaagagaagaataaagttgttgagaagtggtaa
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