Clupea harengus (Atlantic herring): 105897350
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Entry
105897350 CDS
T09045
Symbol
sort1b
Name
(RefSeq) sortilin 1b isoform X1
KO
K12388
sortilin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
105897350 (sort1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Motif
Other DBs
NCBI-GeneID:
105897350
NCBI-ProteinID:
XP_012679722
Ensembl:
ENSCHAG00000017607
UniProt:
A0A6P3VT68
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Position
4:complement(1758398..1782564)
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AA seq
817 aa
AA seq
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MGRLRCCLLVFLLPVVFCVDFREGSRQSSRSLSFFAKSSQLGQHHIARRSLGHKVNKRST
DQGGDTCNALQGYQSKLADNTHSYSFNDLSGSVSLAWVGDGTGVVLALTTFQVPLFMLRF
GQSKLYRSENYGKSFQDVTELINNTFIKTEFGIAIGPENCGKVILTGDVTGNSGSRIFLS
TNSGNSFNHVDLPFHPMVQIMYNPHEPKVLVVISNKHDLWLSENFGSDWRMIHSTVCLVK
WGMDNTLFFTTNLNGSCFDRGMLVLRKTSDYGKTSKTIGEKIYSFGIGGRFLFASVMTRT
VQQGNMRMIHVSVDQGDVWNIAQLPAVGHEQFYSILAANNDMVFMHVDDPGDTGYGTIYV
SDNRGTVYSESLERHLYTTTGGETDFTNVTSLRGVFITSILAEDGSVQSVMSFDQGGEWV
PIQKPLNSQCDSTAADKEKCSLHIHASYSTSMKVNVPMLPLSEPNAVGLILAHGSVGDAI
SVMTPDVYVSDDGGYSWQKALSGPHHYAILDSGGLLVAVEQSNEAISAIKFSTDEGQCWH
VYNFTNDPIFFTGLASEPGARSMNVSIWGYRDSFLSQYWVSITIDFRELLTRDCQDDDYV
QWLAHSDDISDPKDGCMLGYKEKFLRLRKDSVCWNGRDYTVNKQHTPCSCTLDDFLCDFG
YYRAENSSECLEQPDLKGHVLEFCLYGKKEQLQTNGYRKIPGDKCEGGVQPVRKEIDLSR
KCVSNLIDPELLKDSQPSSSAPIIATVIVILVISIAAGVLFVKKYVCGGRFLVHRYSVLQ
HNAEVNGIEGVDEPLDTNVAAPAKIEFHDDSDEDLLE
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggggaggctgcggtgctgcctcttagtttttttgttacccgtggtgttttgtgtagat
tttcgagagggatctagacagtcatctcgttcactatcgttttttgcgaagagttcccaa
ctgggacagcaccacattgcaagaagatcacttggacacaaagttaacaagaggagcacc
gatcaaggaggagacacctgtaatgctcttcagggttatcagagcaagttagccgacaac
actcatagctattccttcaacgatctgagtggatctgtgtccctcgcatgggttggcgat
ggaactggagtagttctggctctcacaacatttcaggttccattattcatgctaaggttt
ggtcagtccaaactctacagaagtgagaactatgggaaatccttccaggatgtaacagaa
ctcatcaacaacaccttcattaaaacagagtttggcattgctattggtcctgaaaattgt
ggcaaggtgattctcactggggatgtgacgggaaattcagggtcaaggattttcctttca
acaaactctggcaacagtttcaaccatgtggacctacccttccatcccatggtgcagatc
atgtacaacccgcatgagcccaaagttctagttgtcataagcaataagcatgacctgtgg
ttgtcagagaacttcggttcagactggaggatgatccattcaactgtctgtttagtgaaa
tgggggatggacaataccctgttcttcaccaccaatctcaatggatcttgctttgaccga
ggaatgcttgtgctgagaaagacgtccgattatggtaaaaccagtaagacaattggtgag
aagatctactcctttggaattggtggacgcttcctctttgcctctgtcatgactagaact
gtccaacaaggcaacatgcgaatgattcacgtgtcagtagaccagggagacgtgtggaat
atagcccagcttcctgctgtgggccatgagcagttctactctatactggcagcaaacaac
gacatggtgttcatgcatgtggatgacccgggtgacacaggctacggcactatctatgtg
tcggacaatcgtggcacggtgtactccgagtcactagagcgccacctgtacaccaccaca
gggggcgagaccgacttcaccaacgtcacctccctccgcggagtcttcatcaccagtatt
ctggctgaggatggctcagtgcaaagtgtcatgtcctttgaccagggaggagagtgggtt
cccattcagaaacctctaaacagccagtgtgactccactgctgcagacaaggagaagtgc
agtctacacatccatgcgtcatacagcacctccatgaaggtgaacgtgcccatgctgccc
ctcagtgagcccaacgcagtgggactcattctggcccatggcagtgtgggcgacgccatc
tcggtgatgacgccagatgtgtatgtgtcggatgacggcggatactcgtggcagaaggca
cttagtggccctcaccactatgccatcctggactctgggggcctgctggtggctgtggag
cagagcaacgaggccatctccgccatcaagttctcgactgacgaaggtcagtgctggcat
gtgtacaacttcaccaatgacccgattttcttcaccgggttggcatcggagccgggagca
cgctccatgaacgtcagtatctggggttacagggactccttcctcagccagtactgggtg
tccatcaccattgacttccgggagcttctcacacgggactgtcaggatgatgactatgtg
cagtggctggctcactctgatgacatcagtgatcccaaggatggatgcatgctggggtac
aaggagaagttcctgaggctgcgaaaagactccgtgtgctggaatggcagggactacaca
gtcaacaaacagcatacaccctgttcctgcactctggacgacttcctttgtgactttggc
tactaccgtgcagaaaatagctcggagtgcctggagcaacccgacctcaagggccatgtg
ctggagttctgcctctacggcaagaaggaacagctgcagaccaatggctaccggaaaatc
ccaggtgataagtgcgaggggggagtacagcctgtacgtaaggagattgacctgagcagg
aagtgtgtcagtaacctcatagacccagagctgctgaaggacagccaaccttccagctcc
gctcccatcattgccactgttattgtcattctggtgatcagcattgctgccggagttctc
tttgtgaagaagtatgtctgcggaggaaggttcctggtacacaggtactctgtcctgcag
cacaatgcagaggtcaatggcattgagggtgtggatgaaccactggacaccaatgtagcg
gcgcctgccaagattgagttccatgatgactcggatgaggaccttttggaatga
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