Clupea harengus (Atlantic herring): 105897386
Help
Entry
105897386 CDS
T09045
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00061
Fatty acid biosynthesis
char00071
Fatty acid degradation
char01100
Metabolic pathways
char01212
Fatty acid metabolism
char03320
PPAR signaling pathway
char04146
Peroxisome
char04216
Ferroptosis
char04920
Adipocytokine signaling pathway
Module
char_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
105897386
00071 Fatty acid degradation
105897386
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
105897386
09143 Cell growth and death
04216 Ferroptosis
105897386
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
105897386
03320 PPAR signaling pathway
105897386
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
char01004
]
105897386
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105897386
Enzymes [BR:
char01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
105897386
Lipid biosynthesis proteins [BR:
char01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
105897386
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of breast milk
105897386
Exosomal proteins of breast cancer cells
105897386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
105897386
NCBI-ProteinID:
XP_012679768
Ensembl:
ENSCHAG00000019998
UniProt:
A0A6P8H5K0
LinkDB
All DBs
Position
20:complement(24225886..24244991)
Genome browser
AA seq
698 aa
AA seq
DB search
MQMPEFLKNFRLPEMAEMREYLQNMSPNTVMGMGAFAALSTFWYATRPKALEPPCDLWQQ
SVEVEGGEYARRSVLVDGGKLLTYYYEDAKTLYEFLLKGVDMSNNGPCLGARKPKQPYEW
WSYKEVVDMAECLGSALLHRGHSKSSNPYIGIFSQNRPEWTMSELACYTYSLVSVPLYDT
LGAEAIEYIIDKASISTVLCDVPAKATLLLDTLSGRKHSVTTVIMMEEVDAELVERGKKN
NVEILLLKDVLALGKEKHQTPIPPSPEDLAVICFTSGTTGNPKGAMLTHKNIVADCSSFM
RIIQKSCPISSSDVHISYLPLAHMFERVVQGVMLVHGACIGFFQGDIRLLMEDLAALRPT
VFPTVPRLLNRMYDKIQGQANSSPVKKWLLGYASRRKEAEMNSGIMRNNSLWDKLIFKKV
QANLGGRVRLMLTGAAPVSGTVLTFLRGALGCQFYEGYGQTECTAGCTITLPGDWTAGHV
GAPLPCNDIKLVDVSEMNYLAANGEGEVCVRGPNVFRGYLMEPEKTKEALDDDGWLHTGD
IGKWLPNGTLKIVDRKKHIFKLAQGEYIAPEKIENVYIRSDAVAQVFVHGDSLQACLVAI
IVPDAETLPKWAKKRGQEGSYDELCKNKDVKKAILEDLLKLGKDGGLKSFEQVKDLALHN
EMFSVENGLLTPTFKAKRMDLRNHFRDQIDKLYSEINM
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgccagagttcctgaagaacttccggttgcctgagatggctgagatgcgggag
tatctgcagaatatgtcccccaacacggtcatgggcatgggcgccttcgccgctctctcc
acgttctggtacgccacgcggcccaaagccctggagccgccctgtgatctctggcagcag
tctgtggaagtggagggtggcgagtatgcccggcgctccgtgctggtggacggtggcaag
ctgctgacgtactactatgaagacgccaagaccctgtacgagttcctcctgaagggagtg
gacatgtccaacaacgggccttgtctgggagcaaggaaacccaagcagccctatgagtgg
tggtcatacaaagaggttgtggacatggcggagtgcctgggctcagcgctgctccacagg
ggtcactccaagtccagcaacccgtacatcggcatcttctcccagaaccggccagagtgg
accatgtctgagctggcctgctacacgtactctctggtgtctgtgcccctctacgatacc
ctgggtgctgaagctatcgagtacatcattgacaaagcctccatctccacggtgctgtgc
gacgtgcctgccaaggccaccctgctgctggacaccctgtcgggccgcaagcacagcgtc
accaccgtcatcatgatggaggaggtggatgccgagctggtggagagaggcaagaaaaac
aacgtagagatcctcctcctcaaagacgtcctggctttgggcaaggagaaacaccaaacc
ccaatccccccttcgcccgaagacctggctgttatttgctttactagtggaacaacagga
aatccaaagggagccatgctcactcacaaaaacatagtggcagactgctcttcattcatg
aggattatacagaaaagctgccccatatccagcagtgatgttcacatatcttaccttccc
ctggctcatatgtttgaaagagtcgttcagggggtgatgttggtccacggagcctgcatt
ggcttcttccagggggacatccgtctcctgatggaagacctcgccgcactgaggcccact
gtcttccccacggttccccgactgctcaaccgcatgtacgataagatccaggggcaggcc
aacagcagcccggtgaagaagtggctgctgggatacgcctccaggaggaaggaggccgag
atgaacagcggcatcatgaggaataacagcctgtgggacaaactcattttcaagaaagtg
caggccaacttgggtggtcgtgtgaggttaatgctcactggagccgctccagtgtctggc
accgtgctcacattcctgcgaggcgcactgggatgccagttttatgaaggctatggacag
acagagtgcacagcagggtgcactataacactcccaggggactggacagcaggccatgtt
ggagcaccccttccatgcaacgacataaagctggtggatgtttccgagatgaattaccta
gccgccaacggagagggagaggtgtgtgtaaggggacccaacgtgttccgaggctacctg
atggagccagagaaaaccaaggaggcccttgatgatgacggctggctccacacaggggac
atcggcaaatggttaccgaatggaacgttgaagattgtggaccggaagaagcacatcttc
aagctggcccagggagagtacatcgcccctgagaagatcgagaatgtctacatccggagc
gacgcagtggcccaggtctttgttcacggggacagtctacaggcctgcctcgtggccatc
attgtgccggacgccgaaaccttgcccaaatgggcgaagaaaagagggcaggagggatcc
tatgatgagctctgcaaaaacaaggatgtaaagaaagccattttggaggatctcttaaaa
ctaggcaaagatggaggtctgaagtcttttgagcaggtgaaagacctcgccctgcacaac
gagatgttctcagtggaaaacggcctcctcactcccaccttcaaagccaagcggatggac
ctcaggaaccacttcagagatcagatcgacaagctctactccgagatcaatatgtag
DBGET
integrated database retrieval system
