Clupea harengus (Atlantic herring): 105897388
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Entry
105897388 CDS
T09045
Symbol
trappc11
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 11
KO
K20308
trafficking protein particle complex subunit 11
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105897388 (trappc11)
Membrane trafficking [BR:
char04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
105897388 (trappc11)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun-like
Gryzun
NTS_TR130
Prefoldin
Motif
Other DBs
NCBI-GeneID:
105897388
NCBI-ProteinID:
XP_031442966
Ensembl:
ENSCHAG00000021995
UniProt:
A0A6P8GYC0
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Position
20:complement(24409713..24428169)
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AA seq
1133 aa
AA seq
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MMSPTQWDLPPELCCRPMAFVALTGLDVVYNAVHRAIWDAFCANRRADRVPISFKVLPGD
HEYPKCRTKRTSYEWYIPKGVLKTGWMNKHLNLVPALVVLFYELDWDDAQWKEKQSECAT
KVEIVRTSLQGRNTKVAVVLIQKKTPLPPGEDVVASERAAALCNACDLSGKSLFVLPHTD
HLVGYIIRLENAFYEHAQTYYYTEIRRVKSHKEFLNKTTHQLLFVRHQFKIGFFSELKQD
TQNALKYYRTAYSLVHELRAHETNMLEIKTMAGFINYKICRLCFQHNTPLDAIAQFRKHI
DLCKKKIGSAELAFEHTAWMSKQFQSFGDLFDEAIKLGLTAIQTQNPGFYYQQAAYYAQE
RKQQAGQLCSHEPNAAPPAPDPLETTAGALDFYGQRPWRQGHQSIDPPDAEKEKLGILAL
QMKEKDIPHSELIIALLSNAVAQFKKYKCPRMKSHLMVQMGEEYYHAKDYTKALKLLDYV
MCDYRTERWWSLLTSILCTALKCSYLMGLIKDYITYSMELVGRASTLXGEQKSRIEKNLI
KVLMNEVPEPEPDCDPASVKAAQALWNDRVSLAGSNDLTVDMQDYVPFVQCKAKFLSPSF
HVDDPVQLHVYLKADCPHSLRFSKLCVSLSNQDYNQYCLVEEPCKSQDILEPSTQENMCL
VPGRTRKYCFRFVAKTEDVGKKIEITGVHLMLGSENGRSVYLNWRGGGGDAASSHEALQA
SRSFKRRGRLPEQPPDWDMATIQASTMVISRVPRISVQLRHEPPALNNEMYCMALTVQSH
EDSVAREVKLTAGLKPGQDANLTQTTHVTLNGSEVCDDTHPALLTDLPIGDLQPGEKIEK
SLYVRSVSTGSRIFLFHVAYTMSTTVEGKEITCKCHKDETVTIETVIPFEVTTRFVSTKF
ENLDRVFMDIPFLLMTDILSASPWPLHLQTSRLDLAATMAAIDQPESQVEDVVLQTGECA
SECFCLKSPPVPSGSTTVASGQYIISWKRKSACAATPVINTVVTLPHVMVETIPLYVHAD
LPSFGRVRESLPVRYSIENRTALVQDVEMSVEPSDAFMFSGLKQVRMRILPGTEQEMLYN
FYPLMAGYQSLPLLSVSLLRFPSVPPQLLQRFLPSRIFVKPQGRPGDDSIAAA
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgatgagccccacacagtgggacctacccccggagctctgctgcagacccatggctttc
gtggcgctgacgggtctggatgtggtgtacaatgctgtgcaccgcgctatctgggacgca
ttctgtgccaaccggagagctgaccgtgtgcccatctctttcaaagtcctgccaggagac
cacgagtatcccaagtgccgcacaaaaagaacctcgtatgagtggtacataccaaaagga
gttttgaagactggctggatgaataagcacttgaaccttgtgccagctctggtggttctc
ttctatgagctagactgggatgatgcgcaatggaaggagaagcagtcagagtgtgccacc
aaagtggaaattgtcagaacaagtctgcaaggcagaaacaccaaggttgctgtagtctta
atccagaagaaaacccctcttcctccaggggaggatgtggtggcctctgaacgtgctgct
gccctctgtaacgcctgtgacctgtcagggaagtccctgtttgtccttccccacactgac
caccttgtgggctacatcatcaggctagagaatgccttctatgaacatgcccagacttac
tactacacagaaataagacgagttaagtctcacaaggagttcctcaacaagacaacccac
cagttactgtttgtgaggcatcagtttaagattggatttttcagcgagctcaaacaagac
acacagaatgcactcaaatactacagaacagcgtatagccttgtgcatgagttacgggct
catgaaaccaacatgttggagattaagaccatggccggcttcatcaactacaagatctgc
aggctgtgcttccagcacaacacccccctggatgccatcgctcagttcagaaaacacatc
gacctgtgcaagaagaagataggcagcgcagagctggcgttcgaacacaccgcctggatg
tccaaacagtttcagtcctttggtgatctcttcgacgaggccattaagctgggcctcacc
gccatccagacccagaatcctggcttctactaccagcaggcggcgtactacgcccaggaa
cggaagcagcaggccggccagctctgcagccacgagcccaatgcggctcctccagcccca
gaccctctggagacgacggcaggagcgctggacttctacggccagagaccctggaggcag
ggccaccagagtattgatcctcccgacgcagaaaaggagaaactgggcattctggctctc
cagatgaaggaaaaagacatacctcactcggagttgatcattgctttgcttagcaatgca
gtggcccagttcaagaagtacaagtgtccacgcatgaagagccacttaatggtacagatg
ggagaggagtactaccatgcgaaggactacaccaaagccctgaagctgctggactacgtg
atgtgtgactaccgcacggagcgctggtggagcctgctgacctccatcctctgcaccgcc
ctcaagtgctcctacctgatgggcctcatcaaggactacatcacctactccatggagctg
gtggggcgagcctccaccctcngcggtgagcagaagtcccgcattgagaagaacctcatc
aaggtgctgatgaacgaggtgccagaaccagagcctgactgtgacccagcgtcagtgaag
gccgctcaggccctgtggaacgaccgcgtctccctggcaggaagtaatgatttgacagtg
gatatgcaggattatgtgccctttgttcagtgtaaggccaagttcctgtctcccagtttc
cacgtggatgacccagtgcagctccacgtctacctgaaggctgactgtccacactctcta
cgcttctccaagctgtgtgtgagcttaagtaaccaggattacaaccagtactgcctggta
gaggagccttgcaagtcccaggacatcctggagccatccacccaggagaacatgtgtcta
gtccccggcaggacacgcaagtactgcttcaggtttgtggccaagaccgaagacgtggga
aagaagatagagatcacaggcgtgcacctgatgctgggcagtgagaatggccgctctgtc
tacctcaactggcgaggtggagggggtgatgcggcatcttcccatgaggctttgcaggcg
tcccgctccttcaagaggcgtggtcgtctcccggagcaaccgccggactgggacatggcg
accattcaggcgagcaccatggtcatctccagagttccccgtatctccgtccagctgcgt
cacgagcccccagcgctcaacaacgagatgtactgcatggctctgacggtccagtctcac
gaggacagcgtggccagagaggtcaagctcacagccggcctcaaaccaggccaggacgca
aacctcacccagacgacccatgtgacccttaatggaagcgaggtgtgtgatgacacccat
ccagccctgctcactgacctccccatcggagacctgcagcctggagagaagattgagaag
tctctgtacgtgcgctccgtcagcactggctcgcgcatcttcctcttccacgtggcctat
accatgagcaccactgtggagggcaaggagatcacctgcaagtgtcacaaggatgaaact
gttaccatagaaactgtcattccatttgaggtgaccaccaggtttgtctctacaaagttt
gagaacctggacagggttttcatggacattcccttcttgctcatgactgacatcttgagt
gcgtcaccatggccactgcacctgcagaccagccggctggacctcgctgccactatggcc
gccatcgaccagcctgagtcacaggtggaggatgtggtgcttcagactggagagtgtgcc
agcgagtgcttctgtctcaagagtcccccggtgcccagcggcagcaccacggtggcatca
ggacagtacatcatctcctggaagaggaaatcagcctgcgctgccacacccgtgatcaac
accgtcgtcactcttcctcatgttatggttgaaaccattccgttatacgtgcatgccgac
ctcccgtccttcggccgtgtgcgtgagtctctgcctgtgaggtactcgattgagaaccgc
accgccctggtgcaggatgtggagatgtccgtggagcccagcgacgccttcatgttctcc
ggcctcaaacaggtgcgcatgcggatcctgccgggcacggagcaggagatgctgtataac
ttctaccccctgatggcggggtaccagagcctgcccctgctcagcgtctccctgctgcgc
ttccccagcgtgcctcctcaactgctccagcgcttcctgccctcacgcatcttcgtcaag
cctcaagggagacccggtgacgactcaatagcagccgcatag
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