Clupea harengus (Atlantic herring): 105897394
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Entry
105897394 CDS
T09045
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03015
mRNA surveillance pathway
char04110
Cell cycle
char04114
Oocyte meiosis
char04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105897394
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
105897394
04114 Oocyte meiosis
105897394
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
105897394
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105897394
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105897394
03036 Chromosome and associated proteins [BR:
char03036
]
105897394
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
105897394
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
105897394
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
105897394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
DUF349
GDE_C
Motif
Other DBs
NCBI-GeneID:
105897394
NCBI-ProteinID:
XP_012679776
Ensembl:
ENSCHAG00000009027
UniProt:
A0A6P3VT95
LinkDB
All DBs
Position
13:complement(20861134..20884225)
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AA seq
622 aa
AA seq
DB search
MPNKTKKEKMGDDELVPYVASSPNPEPAKSAKGSTKNSNVSSGKDPGSENADEAQQQQTA
SKRPSNSTPPPTQLNKIKYSGGPQIVKKERRQSSSRFNLTKNRELQKLPALKDAPPVDRE
ELFVQKLRQCCVLFDFVTDPLSDLKYKEVKRAGLNEMVEYITHNRDVVTECIYPEAVIMF
SVNLFRTLPPXSNPTGAEFDPEEGRSTTPWRSAWPHLQLVYEFFLRFLESPDFQPNVAKK
YIDQKFVMSLLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYVRRQINNIFYRFIYETEH
HNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEK
DSSLTEPVIMGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFVKVMEPLFRQLAKCVSS
PHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPALYKNSKSHWNKTIHGLIYNALKLF
MEMNQKLFDDCTQQYKAEKQKEKYKLKEREEIWHKIEDLAKQNPNMQLVYPELRPGLPDE
YMMYNDAGVPLYSMETETPTAEDIQLLKKAVETEATPGMKELKKDKVLMRRKSELPQDVY
TIKALETHKRAEEYLTANQEAL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgccgaataaaacgaaaaaagaaaagatgggtgatgatgaacttgtgccttatgtcgcc
tcatctccgaacccggaaccagctaaatctgcaaaaggcagcacgaaaaacagtaatgtc
agcagtgggaaggatcctggaagcgaaaatgcagacgaggcacaacaacagcagacggcc
agcaagcgtccgagcaacagcacccctccgcccacccagctgaataagatcaagtactct
ggcgggccgcagatcgtcaagaaggaacgccgccagagctcctcacgcttcaacctcacg
aagaaccgcgaactccagaaactacctgctctcaaagatgcccctcctgtggatcgagag
gagttgttcgtgcagaagctgcgtcagtgctgtgtgctctttgactttgtgactgaccca
ctcagcgacctcaagtacaaggaggtcaagcgcgccggcctcaacgagatggtggagtac
atcacccacaacagagacgtggtcacagagtgcatctacccagaggccgtcatcatgttt
tcagtgaacctcttccggacgctgccccctncctccaaccccacaggggcggagtttgac
ccagaggagggaagaagcactacgccttggaggtcagcctggccccacctacagctggtg
tacgagtttttcctgaggtttttggagtctcctgatttccagccgaatgtcgccaaaaaa
tacatagaccaaaagtttgtaatgtcgctgctggatttgtttgacagcgaggatcctcgg
gagcgggacttcttgaagaccatcctccaccgcatctacgggaagttcctgggcctccgc
gcctatgtccgacgccagatcaacaacatcttctacaggtttatctatgagacggagcat
cacaacggcatcgcagaacttttagaaatcttaggaagtattataaatggctttgccctg
cctctgaaggaggagcataagatgttcctcatccgggtgctgctgccactgcacaaagtc
aagtctctgagcgtctaccacccacagctggcgtattgtgtggtgcagttcctggagaag
gacagcagccttactgaaccggtgatcatgggcctgctgaagttctggccaaagacccac
agccctaaggaggtgatgttcctgaacgagctggaggagatcctggacgtcatcgagcca
tccgagttcgtcaaggtcatggagccactcttcagacagctggccaagtgtgtgtccagc
ccccacttccaggtggcggagagagcgctgtactactggaataatgagtacattatgagc
ctcatcagtgacaacgctgccaagatcctccccatcatgttccccgcactctacaagaac
tccaagagccactggaataagacgatccacggcctcatctataatgccctcaagctgttc
atggagatgaaccagaagctgtttgacgactgcacccagcagtacaaggcggagaaacag
aaagaaaagtacaagcttaaggaacgagaggagatctggcacaagatcgaggatctagca
aaacagaatccaaatatgcagttagtgtatcctgagctgaggcctggccttcctgatgag
tacatgatgtataatgatgccggggtgccgctctactccatggaaacggagacccctact
gctgaggacattcagctgctgaaaaaggcagtggagacagaagccacgccgggcatgaag
gagctgaagaaggataaggtgctgatgaggcggaagtcggagctccctcaggacgtctac
accatcaaagccctggaaacgcacaagcgggcagaggagtacctgacagccaatcaggaa
gccctctga
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