Clupea harengus (Atlantic herring): 105897417
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Entry
105897417 CDS
T09045
Symbol
tjap1
Name
(RefSeq) tight junction-associated protein 1 isoform X1
KO
K06105
tight junction protein 4
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105897417 (tjap1)
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Gene cluster
GFIT
Motif
Pfam:
Pilt
HIP1_clath_bdg
OmpH
ATG17_like
TPR
DUF4200
Bacillus_HBL
BRE1B
FKBP15
Med9
DUF4795
Motif
Other DBs
NCBI-GeneID:
105897417
NCBI-ProteinID:
XP_031434965
Ensembl:
ENSCHAG00000008899
UniProt:
A0A6P8GJ97
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Position
13:complement(20724083..20806279)
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AA seq
781 aa
AA seq
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MTSAGPARKPYRKAPPQHRETRHSLPVFREDLGVSAGPPSGSPGMAPPSPGTQHDPCQES
LSDSDRIKILQQQNEDLRRRLTQTTHKMEAMETEFEASRHYMQAEMGRTRDDLDKMRDKF
RRLQNSYTASQRANQELEEKLHALLRKVERDKKTMDQEIVELTNKLLDAKNTIDKLEELN
ERYRQDCNLAVQLLKCNKSHFRNHKFADLPYELQEMVNKHMKSSQSGQPGLAAQGQDPDT
LSLTPADVVPTSVIARVLEKPEPLVLNSAQSSSGVGRPVAEDVFVHVDMTGPGSEGARGG
YENGGPGHGGRPPQAASGTEPQHLNGSCRRQGSLDGPGPDDPGAMAVAAAAFEKLNPYPA
PLHPAHAIYPGRKVIEFSSDDKVKIPKNSPLPNCTYATRQAISLSLVQNEEEAANERQRH
SPSSSPAVSEGGWRSGASSSSGGGSSSHQSHPHHHHHHHHRQAATPPHTDATDPPSSQSS
PFSSPPQPPSAFASSGSSEEDLLTNWQRMFVEKMAPSSENTLINRTSFSSETVKELQHVR
HDQSPSPCGPSRGASRGAYSDGEEGSSTRSWTASRESSLDTDTGSLADLRTRRGQYGADF
SHEESEQLLMGLDPLDGDDGASGDTAVTLETSPTAGKRQESLDDVGSMGSSAEERDILPQ
DFPVISPRVLAGLEDYSEQPPSPPPSNGAHGQPRRPHRPPEESQEDGVAPPAPQGQPHQG
TGARQPPGLVAVGTSSLSLSPSLLLSLSLFPLLLPLSVSLSSLSPPLSRSLSLSLSTGLS
G
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgcgggcccagccaggaagccgtaccgcaaggctccgcctcagcaccgcgag
acgcgccacagcctgcccgtattccgcgaggaccttggcgtctctgccggaccacccagc
ggctcccccggcatggcgccgccatcccccggcacccagcacgacccctgccaggagtcc
ttatcagactcagacaggatcaagatcctccagcagcagaatgaggacctgcggaggcgc
ctgactcagaccacacataagatggaggccatggagacggagttcgaggccagccgacac
tacatgcaggcagagatgggacgcacacgagacgacctggacaagatgagagacaagttc
cgcagactccagaacagctacacagcttctcagagggccaaccaggagctggaggagaag
ctgcacgccttgctgcgcaaagtggagcgggacaagaagacgatggaccaggagattgtg
gagctcaccaacaagctcctggacgccaagaacactatcgacaagttggaggagctcaat
gagcgctatcggcaggattgtaatttggcggtgcagctgttgaagtgcaacaagtctcat
ttccgaaatcacaagtttgccgacttgccttacgagctgcaggagatggtcaacaagcac
atgaagagctcacagagcgggcagcccggcctggcggcacagggccaggaccccgacacc
ctcagcctgacgcccgctgacgtggtgcccacctccgtcatcgcccgcgtcctggaaaag
cctgagccgctggtgctcaactcggcccagtccagcagcggcgtcggccgacccgttgct
gaagatgtgtttgtgcacgtggacatgaccgggccgggcagcgaaggggccagaggcggc
tacgagaacggagggccaggtcacggagggcgccccccgcaggcagcgagcggaacggaa
ccgcagcacctgaacgggtcatgccgacgccagggcagcctggacggcccggggccggat
gacccgggagcaatggcggttgcggcggcggcattcgagaagctgaacccgtacccggcg
cccctgcacccggcccatgccatctacccgggccgcaaggtcatcgagttctcgtcggac
gacaaggtgaagatcccgaagaacagcccgctgcccaactgcacgtacgccacacggcag
gccatctccctcagcctggtgcagaacgaggaggaggcggccaacgagcgccagcgccat
tcccccagcagcagccccgccgtctccgaggggggttggcgctccggggcctcttcgtcc
tcaggggggggcagcagcagccaccagtcccacccccaccatcaccaccaccaccaccac
cggcaggcggccacccccccgcacacggatgccaccgaccccccctccagccagtccagc
cccttcagcagccccccccagccccccagcgcttttgccagctctggcagctccgaggag
gacctgctgaccaactggcagcgcatgttcgtggagaagatggccccgtcgtccgagaac
acgcttatcaaccgcacgtccttcagcagcgagaccgtcaaggagctccagcacgtgcga
cacgaccagtcccccagcccctgcgggcccagcagaggggcctcccgaggggcttactcc
gacggggaggagggctcctccactcggagctggacggccagccgcgagtctagcctggac
acggacacgggcagcctggcagacctccgcaccaggagggggcagtacggcgctgacttc
tcacatgaggagagcgagcagctgctcatgggcctggacccgctggacggtgacgacggc
gccagcggtgacacggcagtcaccctggagaccagcccgacggcgggcaagcggcaggag
tccctggatgacgtgggctcgatggggagctcggcagaggagcgggacatcctgccccag
gacttccccgtcatctccccccgcgtcctcgccggcctggaggactactccgagcagccc
ccctctcccccaccctcaaacggggctcacggtcagccccgccggccccaccggccccca
gaagagtcccaagaggatggggttgcaccacctgcaccgcaaggacagcctcaccagggc
acaggagcacggcaacctcctggactagtggcagtagggacctcttctctctctctctct
ccctctctcctcctctctctctctctcttccccctcctcctccctctctctgtctctctc
tcttccctctctcctcctctctctcgctctctctctctttctctctccactgggctctct
ggatga
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