Clupea harengus (Atlantic herring): 105897493
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Entry
105897493 CDS
T09045
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X2
KO
K09099
aryl hydrocarbon receptor nuclear translocator-like protein 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105897493
Transcription factors [BR:
char03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
105897493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
PAS_4
Per3-like_PAS-A
PAS_8
PAS_2
bHLH_INO2
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
105897493
NCBI-ProteinID:
XP_012679877
Ensembl:
ENSCHAG00000011743
UniProt:
A0A6P3VSB6
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All DBs
Position
16:complement(12270033..12290745)
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AA seq
669 aa
AA seq
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MSAGKVAANSVEGAPEEHTGKARSSSKASSRIPVSLPRIMTRVSSCSVWSEPAAPSSSSS
SSSISCMDLSRKRKGKGRSLGGIISGHPMHQVPLSSNGSLDAEMLSEPDRSEGEDQQSKM
RCFREPHSQIEKRRRDKMNILIEELSAMVPACNPLARKLDKLTVLRMAVQHLKSLKGTTS
SFSEAHPKPSFLPEDELKQLVLRAADGFLFVVSCDRGKIIFVSESMSKTLHYSRMELIGQ
SLFDYVHPKDVSKVKEQLSASELYPRERLIDTKTGVQVPSDVPSGNYISTGARRSFFCRM
KQSRAAWRSGKKVPQLSTSKKKESQRYCTVHCTGYMRSWSTHQLDTESEVDMERESSHLP
CLVAMGRVHSGPLPREEASEVTVRPTEFVTRYAVDGKFTFVDQRATTIIGYLPQELLGTS
CYEYFHQEDLAHLAESHRKVLRSKEKIETNRYKFKTKQGSFVTLQSQWFSFINPWTKEME
FIVSTSKVVSGCGEKGEKAVEPSDFRTTQASAEEVKHFSPVIPGISSGSGTMIYTGSIGT
QIANELLDFNSRMNSPSSGAPSPFCLLPEKSPVVPSQPSGPVPNTEHDGRQPGKSGLEPS
QGPSGAAFLGGEASTSAGEIAELDLDTVVGPSGLGLSSDEAAMAVIMSILETDTNLSGAM
DFDELQWTL
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggggaaagtcgcggccaacagcgtcgaaggagcgcctgaagaacacacagga
aaggcgcgctcttcttctaaggcttcatcgagaatcccggtctccctgccccgcatcatg
acacgggtttcctcttgcagtgtatggtctgagccagctgccccttcctcctcctcctcc
tcctcctccatctcctgtatggacttgtcacggaaacggaaggggaagggcaggagcttg
ggagggatcatatctggccaccctatgcaccaggtgcctctgtcttcaaacgggagttta
gatgccgagatgcttagtgaaccggacaggtcagagggagaggaccagcaaagcaaaatg
agatgcttcagagaaccgcacagtcagattgagaagcgacggcgggacaagatgaacatc
ctcatcgaagagctctccgccatggtgcctgcctgcaacccgctagcccgtaagctggac
aagctgactgtactccgtatggctgtgcagcaccttaaatcccttaaagggactacaagt
tctttttctgaagcccatcccaagccttcatttctgcctgaagatgaactcaaacaatta
gtgctaagagctgcagatggtttcctgttcgtggtgagctgtgacaggggaaagatcatc
tttgtctcagagtccatgtctaagacacttcactatagtcggatggagctgataggacag
agtctgttcgattatgttcatcctaaagatgtcagcaaggtgaaggagcagctgtctgca
tcagaactgtatcctcgtgagcgactcattgatactaaaaccggggtgcaggttccctcc
gatgtgccgtctggaaactacattagcacgggcgcccgtcgctccttcttctgtcgcatg
aagcagagccgggccgcgtggaggtcggggaagaaggtgcctcagctctccacctccaag
aagaaagaatcccagcggtactgcactgtgcactgtacaggctacatgcgcagctggtcc
acccaccagctcgacacagagagcgaagtggacatggagagggagagctcccacctcccc
tgcctggtggccatgggccgcgtccactccggccccctccctcgagaggaggccagcgag
gtcaccgtcaggcctactgagttcgtcacccgctatgccgttgatggcaagtttaccttt
gtagaccaaagggccactactatcataggatatttgcctcaggaactactgggaacatct
tgttatgagtatttccaccaagaggacttggcacatctggccgaaagccacaggaaagtc
ctccgcagcaaagagaagattgagacaaaccgctacaagttcaagacgaaacagggctcc
tttgttacactccaaagccagtggtttagttttataaatccgtggaccaaagagatggag
tttattgtgtcgacaagtaaagttgtatcgggttgtggtgaaaaaggggagaaggcagtg
gagccaagtgatttcaggacaacgcaagcctcagcagaggaagtcaagcacttctctccg
gttattcctggaatcagcagtggctcaggcacaatgatctacactggaagcattgggacc
caaattgccaacgagttgctggacttcaacagcaggatgaactctccctcaagtggggcg
cctagccctttctgtttacttccagagaagtctccagtagtgccctcacaacccagcggc
cccgtgccaaacacagagcatgatggcaggcagcctgggaagtctggactggagccaagc
cagggacccagcggggctgccttcctgggcggcgaggcctccacgagcgcaggcgagatc
gctgagttggacctggacacagtggtggggcccagtggccttggccttagcagtgacgag
gcagccatggcagtgatcatgagcattctggagacagacactaacctgagcggagccatg
gactttgacgagttgcaatggactctgtga
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