Clupea harengus (Atlantic herring): 105897513
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Entry
105897513 CDS
T09045
Symbol
dclre1c
Name
(RefSeq) protein artemis isoform X1
KO
K10887
DNA cross-link repair 1C protein [EC:3.1.-.-]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105897513 (dclre1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105897513 (dclre1c)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
105897513 (dclre1c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DRMBL
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
105897513
NCBI-ProteinID:
XP_012679897
Ensembl:
ENSCHAG00000005989
UniProt:
A0A6P3VTC9
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All DBs
Position
16:11913483..11921389
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AA seq
672 aa
AA seq
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MSSFAGRMKEYSTISLDRFDRENLHARAYFLSHCHKDHMKGLKGPLLKRKLKFSLTVKLY
CSFVTKELLLSNPKYGFWEGHMVALELDSPTHISLIDETTGELEDVVVTLLTAGHCPGSV
MFLFEGGQGTVLYTGDFRLASGDAARMEFLHSGNRVKDIQSVYVDSTFFDPRFCQIPSRE
ACLNGIKELVRDWLIRSPYHVVWFNCKAAYGYEYLFTNLSQEFGCQIHVKSLDMFQKMPE
ILSHVTTDRATQIHACRHPKDEEFFRANRLPCGCMAKDGKPLRIISIKPSTMWFGERTRK
TNVVVRMGESSYRACFSFHSSYSEIKDFLSYICPVNVYPNVIPMGRTLEEVTELLKPLGR
EHSGRAEIVYKPLGLLKRAREECTSEVSDSDDELFDEVAVEPQRKKLLTSEKAEPQRCET
PASPVALKDFLPESRPSVHTANYADCTESNDDDDDDEDEGGDGNDTGEKVVQTPKQDAAN
SPSSGDACTTSNPPQWDAFFKPGSLPTDESSEPDNSQTSLARSSEYTCSQSPVLITEDEC
DLDDFHLSSSQSTHISDNGVENYTEMDTVLLHPETTRAECQDSQGEATTNAESGGGAQSL
PEAKDAVNDSRNSQSNTAENTEPRSDSQESSDFELPPTPGSTVPLPEELKKLYQKLAAGE
ELFLRRGSKGSV
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagttctttcgcgggtcgaatgaaggaatactcaacgatttccctagatcgttttgac
agggagaatttgcatgccagagcttattttttgtctcattgccataaagaccacatgaaa
ggactaaaagggcccttgttgaaaagaaaacttaagttcagtttaacagtcaagctctac
tgttcgttcgttaccaaagaactcttactgagcaatccgaaatatggcttctgggaaggg
cacatggtagcccttgagcttgacagtccaacccacatatcgctgattgacgaaacaact
ggagagttagaagatgttgtcgtcactttgcttacggcgggacactgcccaggatcagtt
atgtttctgtttgagggggggcaaggaacagtgctgtacacgggagacttcagactggcc
tcaggcgacgccgctagaatggagttcctgcactccgggaacagggtcaaagacatacaa
agtgtctatgtggactctacattctttgacccaaggttctgtcagatacccagcagagaa
gcttgtctgaatggaataaaggaactggtgcgagactggctcattcggagcccgtaccat
gtggtgtggtttaactgcaaggcagcctatgggtacgagtacctcttcaccaacctgagt
caggagtttggctgtcagatccatgtgaagagcctagacatgttccagaagatgcccgag
atcttgagtcacgtgaccacagaccgagcgacacagatccatgcatgcaggcatccgaag
gatgaggagtttttccgggcgaacaggctgccgtgtggctgcatggccaaagatgggaag
cctctgcgtatcatcagcattaagccctccaccatgtggtttggagagaggaccaggaaa
accaatgtcgttgtcagaatgggggaaagttcgtacagagcctgtttctctttccactcc
tcctactcagagatcaaagacttcctgtcctatatctgtccagtgaacgtctatccaaat
gtcatccccatgggacgcacccttgaggaggttacagagctactgaagccactgggccga
gaacattctggaagggctgaaattgtctacaagcctcttggtctcctgaaaagagcgaga
gaggagtgcacttcagaagtatcagacagtgatgatgaactgttcgatgaggttgctgtg
gagccccagaggaagaagttgctgaccagcgagaaagcggagcctcagcgctgtgagacg
ccagcttcccctgttgccctgaaggacttcctgcccgagtcacgtccctcagtccacaca
gccaattacgcggactgcacagaatctaatgatgacgacgatgatgatgaagacgaagga
ggtgatggtaatgatacgggtgaaaaggttgtccagacccccaaacaggatgcggcaaac
agtccgtcatctggtgatgcctgcaccacctccaacccacctcagtgggacgccttcttt
aaacccggatccctgcccacggacgagagctccgagccggacaacagccagaccagcctg
gcccgctccagcgagtacacctgctcgcagtctccggtgctgatcaccgaggacgagtgt
gacttggacgacttccacctgtcgtcctcgcagtccacccacatctccgataacggggtg
gagaactacaccgagatggacaccgtcctcttacaccctgagaccacgagggctgagtgc
caagatagtcaaggtgaagcgacaaccaatgcagagtcagggggcggagctcagtcactt
ccagaggcaaaggatgctgtaaatgacagtcgtaacagccaatccaatacagcagagaac
acagagccaagatctgattcgcaggagtcgtctgactttgagctgccgcccacccctggc
tccacggtgccactgccggaggaactgaagaagctgtaccagaaactggccgcaggcgag
gagcttttcctcaggagaggcagcaagggctcagtctga
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