Clupea harengus (Atlantic herring): 105897562
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Entry
105897562 CDS
T09045
Symbol
dcn
Name
(RefSeq) decorin
KO
K04660
decorin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04350
TGF-beta signaling pathway
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105897562 (dcn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105897562 (dcn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
char00535
]
105897562 (dcn)
Proteoglycans [BR:
char00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
105897562 (dcn)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_14
LRR_9
LRR_5
LRR_LRWD1
UAE_UbL
Motif
Other DBs
NCBI-GeneID:
105897562
NCBI-ProteinID:
XP_012679959
Ensembl:
ENSCHAG00000005791
UniProt:
A0A6P3VS88
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All DBs
Position
16:11832824..11859077
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AA seq
371 aa
AA seq
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MRSACLSLLLVSVCWALPFRQSGFMDFMMEDEPGSGLEPEPEVPVGRAPRVNMPPMGGPV
QQVCPFRCQCHLRVVQCSDLGLKNVPEDISADTTLLDLQNNKITEIRENDLKGLKVLQTL
ILVNNKITTVHPKALIPLGKLQRLYLSKNMLKDMPANMPKSLQELRIHENEITKIKKATF
QGMANMIVMELGSNPLSGAGIEAGAFSDLKRVSYIRISDTEISAIPKGLPTSLSELHLDG
NKITKVQSESLKGLKNLAKLGLSYNQISMVENGTLAMVPHLREIHLDNNALTSVPPGLPE
HKYIQVIYLHNNKIAAVGTEDFCPPGYNTKKAMYSGISLFSNPVTYWEIQPITFRCVFDR
SAIQLGNYRKK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcggcctgtctctccctgctcctggtgtcggtgtgctgggccctgcccttccgc
cagtctggcttcatggacttcatgatggaggacgagccaggctctggtctggaaccagaa
cctgaggtgcctgttgggcgagccccgagggtaaacatgccacccatggggggacccgtc
cagcaggtctgccccttcagatgccagtgccatctacgggttgtacagtgctctgactta
ggcctgaagaatgttccagaagacatctccgcagacaccaccttgttggatctgcagaac
aataagatcacagagatccgtgagaatgacttaaagggactgaaggtcctacagaccctg
atcctggtcaataacaaaatcaccaccgtccaccccaaggccctgatccccttgggcaag
ctgcagaggctttacctgtccaagaacatgctgaaggacatgcccgccaacatgcccaag
agcctgcaggagcttcgcatccacgagaacgagatcaccaagatcaagaaggccaccttc
cagggcatggccaacatgatcgtgatggagctcggctccaaccccctgtcaggcgcgggc
attgaggcaggagccttctccgacctaaagagggtctcctacatccgcatctcagacacc
gagatcagcgccattcctaaaggtcttcccacctccctgtcagagctccatcttgatgga
aacaagatcaccaaggttcagtcagaaagcctgaaaggcctcaagaacctggctaagctt
ggcctgagctataaccagatcagcatggtggaaaatggaaccctcgccatggtgcctcac
ctgcgtgagattcacctggacaacaacgctctgaccagtgtgccacccggcctgcccgag
cacaagtacatccaggtaatctatctccataacaacaagatcgcagctgtgggaacggaa
gacttctgccctccaggctacaacactaagaaggctatgtactccggaatcagcctcttt
agcaaccccgtgacatactgggagatccagccaatcaccttccgctgcgtcttcgaccgc
tccgccatccaattgggcaactacaggaagaagtag
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