KEGG   Clupea harengus (Atlantic herring): 105897604
Entry
105897604         CDS       T09045                                 
Symbol
zgc:172323
Name
(RefSeq) glial fibrillary acidic protein
  KO
K07610  desmin
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    105897604 (zgc:172323)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:char04812]
    105897604 (zgc:172323)
Cytoskeleton proteins [BR:char04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     105897604 (zgc:172323)
SSDB
Motif
Pfam: Filament Filament_head Spectrin OVT1 DUF7491 DEDD_Tnp_IS110
Other DBs
NCBI-GeneID: 105897604
NCBI-ProteinID: XP_031432775
Ensembl: ENSCHAG00000004564
UniProt: A0A6P8GCH2
LinkDB
Position
11:complement(19875177..19879273)
AA seq 573 aa
MSRSPERISSYRRHFEECSSTSLQVRVSSPSPSRQDPRQQRAASYSRSAVATAGNGMAMG
RRTASTSRKPLMGSGASMGTVCTGGDAVDLEAASVENQEFLSTRTSERKEMVVLNDRLAA
YIEKVRSLEQQNKLLEAEIEGLQNRFLKPTGLRMLYEEQLKELGRLADQMRKQRDLALAA
KDATAGQLEMMKVKYEEAVELRRKAEMDIELFRPDVDAATSSRIALEKQLENLEAEIEFL
KRIQGQEIEELMKQIYSAHATAGDAFALPDIASALKQIQQEYDVIAAKNLQEMDSWYNSK
FEDLNNKTTKHVDKVRGAREELASAKKDIQGKERDMDGLKTKNDGLEAQILAAQERHKKE
LEALQARIEALQLELKTTKGRIAQLLMEYQDLLNVKMSLEIEITTYRKLIEGEDIRITSM
VQGVMGTRAIAGMSAGMAGGLGSGAGAGYGAGAGAGAGYGAGAGAGYGAGAGAGVAGMGA
GTGMGAGMAAQMGMGAGGLGAGNGGAANGRLGAGLGNGAHGQTIATYSEEQAVEMTERKT
VLIRTVKNEDDTLESDTQERSYIIEGAADEEEE
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgagccgcagcccagaaaggatttcgtcgtaccgtcggcattttgaagaatgcagctcc
acatccctccaggtgagggtgtctagcccgtcaccatcccgccaggacccccggcagcag
cgtgctgccagctactcccggtcggccgtggccacagctggcaacggcatggcgatggga
cgcaggacagcctccacctcccgcaagcccctgatggggagcggcgcaagcatgggcacc
gtttgtacgggaggagatgcggtagatctggaagctgcttccgtcgagaatcaagaattc
ctcagcactcgcaccagcgagcgcaaggagatggtcgtgctgaacgacaggctggctgca
tacatcgagaaggttcggtcactggagcagcagaataagctgctggaggcagaaatcgag
ggcctccagaaccgattcctgaagcccacgggcctgcgcatgctgtatgaggagcagctc
aaagagctcgggaggcttgccgatcaaatgagaaagcagcgggacctggctcttgctgcc
aaagacgccacggctggacagctggagatgatgaaggtcaaatatgaggaagctgtggaa
ctgaggaggaaggccgagatggacatcgagcttttccgtccggatgttgacgcagccacc
tcctcgcgcattgctctggaaaaacaacttgagaacctggaggccgaaattgagttcctg
aagaggattcaaggacaggaaatcgaggaactgatgaaacaaatctattctgctcatgcc
accgccggagacgccttcgccctccccgacatcgcgtctgctcttaagcagattcagcag
gaatatgacgtcatcgcggcaaagaatcttcaggaaatggactcgtggtataattcaaaa
ttcgaagatttaaacaataaaaccacaaaacatgtggataaagtgcgtggtgcacgagag
gagcttgcatccgctaagaaagatattcaaggcaaagagagggacatggatggtctgaag
accaaaaacgatggtctggaggctcagattcttgcagctcaagagagacacaagaaagag
ctggaggctctccaggccaggatcgaagctcttcagttggagctgaaaaccacaaagggg
agaatcgcacagcttctcatggaataccaggacttgctgaatgttaagatgagcctggag
attgagatcactacatacaggaagctgattgagggcgaggacatccgcatcaccagtatg
gtgcagggggtgatgggcacgagggccatcgctggaatgagtgctggaatggcgggtgga
ctaggttccggagctggagctggatatggtgctggagctggagctggagctggatatggt
gctggagctggagctggatatggtgctggagctggagccggagtggccggaatgggggca
ggaacaggaatgggtgctggaatggccgcccaaatgggaatgggggcaggtggtctcggc
gccggaaacggtggagctgccaatggtagacttggagccggtctgggaaatggcgcccat
ggccagaccatcgccacctactccgaggagcaggccgtggagatgactgagaggaagacc
gtgcttattagaacagttaaaaacgaggacgacaccctcgagagtgacacacaggagagg
agctacatcattgaaggagctgccgatgaggaagaggaatag

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