Clupea harengus (Atlantic herring): 105897604
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Entry
105897604 CDS
T09045
Symbol
zgc:172323
Name
(RefSeq) glial fibrillary acidic protein
KO
K07610
desmin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105897604 (zgc:172323)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105897604 (zgc:172323)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
105897604 (zgc:172323)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Spectrin
OVT1
DUF7491
DEDD_Tnp_IS110
Motif
Other DBs
NCBI-GeneID:
105897604
NCBI-ProteinID:
XP_031432775
Ensembl:
ENSCHAG00000004564
UniProt:
A0A6P8GCH2
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Position
11:complement(19875177..19879273)
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AA seq
573 aa
AA seq
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MSRSPERISSYRRHFEECSSTSLQVRVSSPSPSRQDPRQQRAASYSRSAVATAGNGMAMG
RRTASTSRKPLMGSGASMGTVCTGGDAVDLEAASVENQEFLSTRTSERKEMVVLNDRLAA
YIEKVRSLEQQNKLLEAEIEGLQNRFLKPTGLRMLYEEQLKELGRLADQMRKQRDLALAA
KDATAGQLEMMKVKYEEAVELRRKAEMDIELFRPDVDAATSSRIALEKQLENLEAEIEFL
KRIQGQEIEELMKQIYSAHATAGDAFALPDIASALKQIQQEYDVIAAKNLQEMDSWYNSK
FEDLNNKTTKHVDKVRGAREELASAKKDIQGKERDMDGLKTKNDGLEAQILAAQERHKKE
LEALQARIEALQLELKTTKGRIAQLLMEYQDLLNVKMSLEIEITTYRKLIEGEDIRITSM
VQGVMGTRAIAGMSAGMAGGLGSGAGAGYGAGAGAGAGYGAGAGAGYGAGAGAGVAGMGA
GTGMGAGMAAQMGMGAGGLGAGNGGAANGRLGAGLGNGAHGQTIATYSEEQAVEMTERKT
VLIRTVKNEDDTLESDTQERSYIIEGAADEEEE
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcagcccagaaaggatttcgtcgtaccgtcggcattttgaagaatgcagctcc
acatccctccaggtgagggtgtctagcccgtcaccatcccgccaggacccccggcagcag
cgtgctgccagctactcccggtcggccgtggccacagctggcaacggcatggcgatggga
cgcaggacagcctccacctcccgcaagcccctgatggggagcggcgcaagcatgggcacc
gtttgtacgggaggagatgcggtagatctggaagctgcttccgtcgagaatcaagaattc
ctcagcactcgcaccagcgagcgcaaggagatggtcgtgctgaacgacaggctggctgca
tacatcgagaaggttcggtcactggagcagcagaataagctgctggaggcagaaatcgag
ggcctccagaaccgattcctgaagcccacgggcctgcgcatgctgtatgaggagcagctc
aaagagctcgggaggcttgccgatcaaatgagaaagcagcgggacctggctcttgctgcc
aaagacgccacggctggacagctggagatgatgaaggtcaaatatgaggaagctgtggaa
ctgaggaggaaggccgagatggacatcgagcttttccgtccggatgttgacgcagccacc
tcctcgcgcattgctctggaaaaacaacttgagaacctggaggccgaaattgagttcctg
aagaggattcaaggacaggaaatcgaggaactgatgaaacaaatctattctgctcatgcc
accgccggagacgccttcgccctccccgacatcgcgtctgctcttaagcagattcagcag
gaatatgacgtcatcgcggcaaagaatcttcaggaaatggactcgtggtataattcaaaa
ttcgaagatttaaacaataaaaccacaaaacatgtggataaagtgcgtggtgcacgagag
gagcttgcatccgctaagaaagatattcaaggcaaagagagggacatggatggtctgaag
accaaaaacgatggtctggaggctcagattcttgcagctcaagagagacacaagaaagag
ctggaggctctccaggccaggatcgaagctcttcagttggagctgaaaaccacaaagggg
agaatcgcacagcttctcatggaataccaggacttgctgaatgttaagatgagcctggag
attgagatcactacatacaggaagctgattgagggcgaggacatccgcatcaccagtatg
gtgcagggggtgatgggcacgagggccatcgctggaatgagtgctggaatggcgggtgga
ctaggttccggagctggagctggatatggtgctggagctggagctggagctggatatggt
gctggagctggagctggatatggtgctggagctggagccggagtggccggaatgggggca
ggaacaggaatgggtgctggaatggccgcccaaatgggaatgggggcaggtggtctcggc
gccggaaacggtggagctgccaatggtagacttggagccggtctgggaaatggcgcccat
ggccagaccatcgccacctactccgaggagcaggccgtggagatgactgagaggaagacc
gtgcttattagaacagttaaaaacgaggacgacaccctcgagagtgacacacaggagagg
agctacatcattgaaggagctgccgatgaggaagaggaatag
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