Clupea harengus (Atlantic herring): 105897655
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Entry
105897655 CDS
T09045
Name
(RefSeq) perforin-1-like
KO
K07818
perforin 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
105897655
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Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
105897655
NCBI-ProteinID:
XP_031442924
Ensembl:
ENSCHAG00000000020
UniProt:
A0A6P8GUT2
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Position
1:complement(300343..306039)
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AA seq
582 aa
AA seq
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MGVSTVTFRMAVYLTLIPLTTQSCTRGLPRECKEAEFAPGSNLAGEGFDITKMERKGAFV
IDMNLWRRENNTCMLCGNPYQEGKMQKVPLPVVDWRVSQKCSMKVASSQYQSSESLVKAS
TTSVENNWKADLKVETKRGAGSLMLAGSQSKLAEYSMEKTKKDKFTFLSHKMVCSYYSYR
VSNQPHLHPEFQHAINQLPKKYSSVNKQRFYKLINNYGTHYMTKVTLGGMVQSVTSIRQC
MASLQGLSSDEIKMCLDVEASASVGDKFKSGAEMKHCQEAKEKTEAKNSFSNNFSDRLTE
IFGGHTTEPELLFSADKDPAAYKEWLSSLPLNPDVISYSLDPLHELLPPNLPLRKQLRKA
IRHYVLESGLWQNCTEPCKSGIKRNAKEPCTCSCHGDPGVGSDCCPTKRGLARVIITAVR
ATGLWGDTSTATDAFVKVFNSQNLQLGRTSVIWNNNSPWWISAFDIGDVLLSQTRAVKFE
VWDEDSGWDDDLLGTCTVDLKEGTKEGVCRLNHGMFFYKLQVTCGPSLSGPSCSEYVSSP
MNGHLERLYVSRHSRPIPKDMLIKMGVFGDEHPTHLNLTNPN
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtttcaacagttacctttcggatggccgtctatctcaccctcatacccctgact
acccagtcatgcactagaggcctaccccgtgagtgcaaagaggctgagtttgccccagga
tccaacctggccggtgagggctttgacatcaccaagatggagcgcaagggagccttcgtc
attgacatgaacctatggaggcgggagaataacacctgcatgctgtgcgggaacccgtat
caagaggggaagatgcagaaagtcccactacctgtggtggactggagagtcagtcagaaa
tgcagcatgaaggttgccagctcacagtaccagtctagtgagtccctggtcaaagccagt
accaccagtgtggagaacaactggaaagctgatttaaaagtagagaccaaaaggggagct
ggatccttgatgctggctggaagccagtccaaattggctgagtactccatggaaaaaact
aaaaaggacaagtttaccttcttgagccataagatggtctgtagttactacagctacagg
gtttccaaccagccccatctccacccagagtttcagcacgccattaatcaacttccaaag
aaatacagcagtgtgaacaagcagcgtttctacaagcttatcaacaactatggcactcat
tacatgacaaaggtgactctgggcgggatggtgcagtcggtgaccagcatcaggcagtgc
atggcctctttacagggcctgtcctcagacgagatcaagatgtgtctggatgtggaagcc
tcagccagcgtgggagacaaattcaagtcaggggcagagatgaagcactgtcaggaggca
aaggagaagacagaggccaagaacagtttctccaacaacttcagtgacaggctcacagag
atctttggtggccacaccaccgagcctgagcttctcttctctgcggacaaagacccggct
gcttacaaggagtggctctcctccctgccactcaacccagatgtgatctcctattcgctg
gatcccctccatgagttgctgccccccaaccttccactgaggaaacagctacgcaaagca
attagacattatgttctggagagtggactctggcaaaactgcactgagccctgcaagtct
ggcatcaaaagaaacgcaaaggagccctgtacgtgcagttgccatggtgatcctggtgtt
ggaagtgactgttgtcccactaaacgtggtcttgctcgggtcatcatcactgcggtgagg
gccactggtttgtggggcgacaccagcacagctacagatgccttcgtgaaggtgttcaac
tctcagaacttgcaacttggacgaacctctgtgatttggaacaacaactcaccttggtgg
atctcagcctttgacatcggtgatgtccttctctctcagaccagggcggtgaagtttgag
gtatgggacgaggacagcgggtgggatgacgacctgctcggaacatgcaccgtggacctc
aaggaagggacaaaagagggtgtgtgtcgcctgaaccacgggatgttcttctacaaactc
caagtgacctgtggcccaagcctgagcggcccgtcctgttctgagtatgtgagctctccc
atgaacggtcacctggagaggctgtatgtgtctcgccattcccggcccataccaaaggac
atgctcataaaaatgggagtgtttggggatgaacaccctacgcatttaaatctgactaat
ccaaactga
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